Biodiversitas Journal of Biological Diversity
Vol. 24 No. 5 (2023)

Root associated Fusarium solani Species Complex (FSSC) in epiphytic and terrestrial orchids

NAMPIAH SUKARNO (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Darmaga, Bogor 16680, West Java, Indonesia)
SOFI MURSIDAWATI (Center of Plant Conservation-Bogor Botanical Garden, National Research and Innovation Agency. Jl. Ir. H. Juanda No. 13, Bogor 16122, West Java, Indonesia)
SRI LISTIYOWATI (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Darmaga, Bogor 16680, West Java, Indonesia)
NAUFAL HAFIZH NUGRAHA (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Darmaga, Bogor 16680, West Java, Indonesia)
WENDI NURUL FADILLAH (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Raya Dramaga, Kampus IPB Darmaga, Bogor 16680, West Java, Indonesia)
MASHURI WAITE (Gill Ewa Lands. 1164 Bishop St, Honolulu, HI 96813, Hawaii, USA)



Article Info

Publish Date
27 May 2023

Abstract

Abstract. Sukarno N, Mursidawati S, Listiyowati S, Nugraha NH, Fadillah WN, Waite M. 2023. Root associated Fusarium solani Species Complex (FSSC) in epiphytic and terrestrial orchids. Biodiversitas 24: 2577-2586. Members of the Fusarium solani Species Complex (FSSC) are ecologically diverse, covering human and plant pathogens, saprobes, and endophytic fungi of economically important plants. The role of FSSC on tropical orchids, however, has received little attention. This research aimed to isolate and identify the FSSC found as endophytes in roots of the epiphytic orchids Cymbidium finlaysonianum Lindl. and Vanda tricolor Lindl., and the terrestrial orchids Calanthe triplicata (Willemet) Ames and Phaius tankervilleae (Banks) Blume. Fungal isolation was obtained from peloton structures within the root. Fungal identification was done using combined morphological and molecular characteristics using ITS rDNA sequences. Four isolates of Fusarium were identified based on morphological characteristics. The BLAST analysis showed that all the isolates were in the Fusarium solani Species Complex (FSSC). Further phylogenetic relationship analysis indicated that all the FSSC isolates belonged to FSSC5 lineage or Fusarium solani sensu stricto, which is nested in FSSC clade 3 as a subgroup. The fungi F. solani sensu stricto V2 and CF34 were isolated from the epiphytic orchids, and F. solani sensu stricto C5 and P44 were isolated from the terrestrial orchids. It is interesting that the FSSC5 isolated from the epiphytic orchids form different groups than those of the terrestrial orchids. This is the first report showing the tropical orchids are the host of the FSSC5 as endophytes and this broadens the known host range and ecological behavior of the FSSC5.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...