Biodiversitas Journal of Biological Diversity
Vol. 24 No. 2 (2023)

Molecular identification of thermophilic bacteria with antimicrobial activity isolated from hot springs in North Sumatra, Indonesia

CHRISMIS NOVALINDA GINTING (Laboratory of Basic Sciences, Universitas Prima Indonesia. Jl. Sampul, Sei Putih Baru, Medan 20118, North Sumatra, Indonesia)
FINNA PISKA (Faculty of Medicine, Laboratory of Basic Sciences, Universitas Prima Indonesia. Jl. Sampul, Sei Putih Baru, Medan 20118, North Sumatra, Indonesia)
HARMILENI HARMILENI (Department of Chemical Engineering, Politeknik Teknologi Kimia Industri. Jl Medan Tenggara No. VII, Medan 20228, North Sumatra, Indonesia)
EDY FACHRIAL (Laboratory of Basic Sciences, Universitas Prima Indonesia. Jl. Sampul, Sei Putih Baru, Medan 20118, North Sumatra, Indonesia)



Article Info

Publish Date
16 Feb 2023

Abstract

Abstract. Ginting CN, Piska F, Harmileni, Fachrial E. 2023. Molecular identification of thermophilic bacteria with antimicrobial activity isolated from hot springs in North Sumatra, Indonesia. Biodiversitas 24: 752-758. Microorganisms such as thermophilic bacteria are promising sources of antimicrobial compounds due to their abundance, which has yet to be widely investigated. Therefore, this study aims to identify thermophilic bacteria isolated from natural hot springs, Sidebuk Debuk, in North Sumatra, Indonesia. The bacteria were isolated from sediments and hot springs water. Isolated 10 bacteria were characterized and identified based on their morphological and biochemical properties, which included gelatinase activity, motility, citrate utilization, triple sugar iron agar test, catalase test, cell shape, color, and Gram staining. Antimicrobial activity was tested using the disc diffusion method against Escherichia coli and Staphylococcus aureus. The most potential isolates were identified molecularly by amplification of 16S rRNA genes using universal primers. The sequences result were trimmed and assembled using BioEdit and submitted to BLAST to determine the homology of the bacteria. The isolate ITU9 was identified as Bacillus megaterium and exhibited the best antimicrobial activity with an inhibition zone of 9.5 mm against S. aureus during 72 h of incubation. This research showed that the thermophilic B. megaterium strain ITU9 was successfully isolated from Sidebuk Debuk hot springs and had stable antimicrobial activity for 72 h against E. coli and S. aureus.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...