Biodiversitas Journal of Biological Diversity
Vol. 25 No. 2 (2024)

Combining eDNA metabarcoding and conventional method in rapid screening of fish diversity in Maros-Pangkep Global Geopark, South Sulawesi, Indonesia

AMBENG AMBENG (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
MUHAMMAD IQRAM (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
MAGDALENA LITAAY (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
ZOHRAH HASYIM (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
WILMA J. C. MOKA (Faculty of Marine Science and Fisheries, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)
GEORGINA MARIA TINUNGKI (Department of Statistics, Faculty of Mathematics and Natural Sciences, Universitas Hasanuddin. Jl. Perintis Kemerdekaan Km.10, Makassar 90245, South Sulawesi, Indonesia)



Article Info

Publish Date
09 Mar 2024

Abstract

Abstract. Ambeng, Iqram M, Litaay M, Hasyim Z, Moka WJC, Tinungki GM. 2024. Combining eDNA metabarcoding and conventional method in rapid screening of fish diversity in Maros-Pangkep Global Geopark, South Sulawesi, Indonesia. Biodiversitas 25: 819-828. A newly designated geopark by UNESCO, Maros-Pangkep Global Geopark, South Sulawesi, Indonesia owns great geodiversity, exceptional cultural heritage, and high biodiversity. However, the global biodiversity crisis that has hit the earth might also occur in Maros-Pangkep river systems, potentially threatening endemic freshwater fish and all other biota. It has been reported that there is high pressure on the environment along the watershed in the Maros-Pangkep rivers, including a high sedimentation rate downstream, which is linked to extreme erosion upstream and could eventually affect fish populations such as endemic ones. This should prompt a call for the authorities to build a strategy for monitoring and documenting aquatic biota such as fish to preserve biodiversity. Environmental DNA (eDNA) could be considered a method for monitoring fish species based on the DNA traces they shed in the water. Hence, this study aims to use eDNA to survey fish biodiversity in several rivers in the Maros-Pangkep Global Geopark and compare the result against the traditional gillnet method. The results showed that using two methods, 29 fish species in 19 families and 15 orders were obtained from the three rivers. Despite the majority of detected species, 25 species, as the result of using eDNA, 4 species were only detected using a traditional method which eDNA failed to identify. Among those species, several endemic and non-native species were successfully identified by either one or both methods. This could eventually be a suggestion for responsible authorities in biodiversity conservation to combine both approaches to monitor and conserve local biodiversity.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...