Biodiversitas Journal of Biological Diversity
Vol. 27 No. 2 (2026)

Genetic diversity and mutant detection of Dendrobium bicaudatum using SRAP markers

IDA AYU PUTRI DARMAWATI (Department of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)
YUYUN FITRIANI (Department of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)
GEDE WIJANA (Department of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)
WAFA’ NUR HANIFAH (Department of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)
RINDANG DWIYANI (Graduate Program of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)
NI LUH MADE PRADNYAWATHI (Department of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)
FITRIA DWI DARMAYATI (Graduate Program of Agroecotechnology, Faculty of Agriculture, Universitas Udayana. Jl. PB. Sudirman, Denpasar 80231, Bali, Indonesia)



Article Info

Publish Date
07 Apr 2026

Abstract

Abstract. Darmawati IAP, Fitriani Y, Wijana G, Hanifah WN, Dwiyani R, Pradnyawathi NLM, Darmayati FD. 2026. Genetic diversity and mutant detection of Dendrobium bicaudatum using SRAP markers. Biodiversitas 27 (2): d270223. https://doi.org/10.13057/biodiv/d270223. Natural occurring mutations have been an important source of genetic diversity and new phenotypes for ornamental plants. However, the occurrence rate is relatively low for most plants, including Dendrobium bicaudatum. Mutation induction triggers mutations in plants and can be achieved through physical or chemical methods. One widely used chemical is Ethyl Methane Sulphonate (EMS). Molecular techniques can detect genetic changes in mutated orchids early, without the need for the plants to mature. Thus, this study aimed to investigate genetic variation and detect mutants in D. bicaudatum orchids following EMS treatment using Sequence Related Amplified Polymorphism (SRAP). This study used four SRAP primer combinations. The DNA concentration of sample B2.Chimera approaches purity, indicated by an A160/280 ratio of 1.67. The results indicated that the four primers exhibited high orchid polymorphism, ranging from 91% to 100%. A total of 47 loci and 258 DNA bands were generated using four primers, yielding a PIC value of 0.32-0.37. The high level of polymorphism detected by SRAP indicates genetic diversity in mutant plants, which importantly contributes to conservation. The analysis of genetic similarity via dendrograms revealed two primary clusters at a coefficient of 0.23: one comprising albino explants and the other consisting of non-albino explants. This result suggests that albino mutants possess genetic traits that significantly differ from those of non-albinos. Non-albino explants, including chimeras and normals, exhibited high similarity coefficients ranging from 0.63 to 0.96.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...