YOGO SETIAWAN
Department Plant Pests and Diseases, Faculty of Agriculture, Universitas Brawijaya. Jl. Veteran, Malang 65145, East Java, Indonesia

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Screening of quorum quenching activity of rhizobacteria against Pectobacterium carotovorum subsp. carotovorum SAFIRA RIZKA LESTARI; FERY ABDUL CHOLIQ; ANTOK WAHYU SEKTIONO; MOCHAMMAD SYAMSUL HADI; HAIDAR FARI ADITYA; NONI RAHMADHINI; RAMADHANI MAHENDRA KUSUMA; YOGO SETIAWAN
Biodiversitas Journal of Biological Diversity Vol. 23 No. 8 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230859

Abstract

Abstract. Lestari SR, Choliq FA, Sektiono AW, Hadi MS, Aditya HF, Rahmadhini N, Kusuma RM, Setiawam Y. 2022. Screening of quorum quenching activity of rhizobacteria against Pectobacterium carotovorum subsp. carotovorum. Biodiversitas 23: 4336-4342. Quorum sensing (QS) is a mechanism for determining the virulence of the phytopathogenic bacterium Pectobacterium carotovorum. P. carotovorum carries out the QS mechanism with the chemical compound acyl-homoserine lactone (AHL) to signal and carry out its pathogenicity and virulence. The pathogenicity of P. carotovorum can be prevented through quorum quencher (QQ) activity derived from bacteria that degrade AHL compounds by producing AHL-lactonase. In the present investigation, AHL-lactonase-producing bacteria were isolated from the rhizosphere of carrot cultivation in Bumiaji Sub-District, City of Batu, East Java, Indonesia. The isolated bacteria were screened for quorum quenching activity. Out of thirty-seven isolates, 7 rhizospheric bacteria showed QQ activity against the Chromobacterium violaceum bioindicator. The hypersensitivity test on tobacco plants showed that, five strains SRL07, SRL09, SRL15, SRL21, and SRL35 did not cause a hypersensitivity response. The five isolates were able to suppress the virulence of P. carotovorum in carrot tubers. The 16S rRNA gene sequences of the five isolates had the highest similarity to Bacillus thuringiensis, B. subtilis, and B. cereus. The five isolates were detected to have the gene encoding AHL-lactonase (aiiA). The present study provides new information about the QQ activity of rhizosphere and its potential as a quorum quencher against P. carotovorum.
Screening of phyllospheric and endophytic bacteria as biocontrol agents of Xanthomonas oryzae pv. oryzae TITA WIDJAYANTI; RESTU RIZKYTA KUSUMA; LUQMAN QURATA AINI; CINDY DIAH AYU FITRIANI; ANTOK WAHYU SEKTIONO; MOCHAMMAD SYAMSUL HADI; YOGO SETIAWAN
Biodiversitas Journal of Biological Diversity Vol. 24 No. 4 (2023)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d240417

Abstract

Abstract. Widjayanti T, Kusuma RR, Aini LQ, Fitriani CDA, Sektiono AW, Hadi MS, Setiawan Y. 2023. Screening of phyllospheric and endophytic bacteria as biocontrol agents of Xanthomonas oryzae pv. oryzae. Biodiversitas 24: 2072-2079. The use of phyllospheric and endophytic bacteria as biocontrol agents may be an eco-friendly alternative strategy to control bacterial leaf blight of rice caused by Xanthomonas oryzae pv. oryzae (Xoo). This study aimed to evaluated the antagonistic potential of phyllospheric and endophytic bacteria against X. oryzae pv. oryzae. The phyllospheric and endophytic bacteria were isolated from organic rice fields in Tumpang Sub-district, Malang District, East Java, Indonesia. The pathogenicity of X. oryzae pv. oryzae was tested on rice plants by the leaf clipping inoculation method. In this study, eight combinations of phyllospheric bacteria (PB) and endophytic bacterial (EB) isolates were chosen based on the highest percentage of inhibition. Streptomycin (positive control) and distilled water (negative control) were also used as a treatment. Identification of selected phyllospheric and endophytic bacteria was carried out through morphological and molecular characteristics. In total, 181 of PB and 76 of EB were isolated from rice plants. Of these, 11 of PB and 13 of EB isolates had potential as antagonists, shown by inhibition zone. Among all treatments, P55+E15 combination showed the highest inhibition zone (83.49%), followed by P55+E27 (82.33%) and P55+E18 (80.98%). Based on morphological and molecular identification, P55, E15, E27, and E18 isolates were identified as Delftia lacustris, Bacillus cereus, Escherichia coli, and Lysinibacillus fusiformis, respectively. The combination of D. lacustris (P55) and B. cereus (E15) can be used as a biocontrol agent against X. oryzae pv. oryzae based on in vitro assay.