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Resistance Test of Potential Mercury-Reducing Bacteria Using Agar Plate Method Amandita, Fitri Yola; Efadeswarni, Efadeswarni; Aini, Nabillah; Fatma, Lania Yuchanitz
The Journal of Experimental Life Science Vol. 14 No. 2 (2024)
Publisher : Graduate School, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21776/ub.jels.2024.014.02.05

Abstract

The restoration of mercury-contaminated sites is a global concern, and countless studies have been conducted to formulate the best remediation practice. Mercury pollution in Indonesia has been a national issue. Thus, the government has enforced the reduction and elimination of this toxic and persistent chemical element and its compounds since 2019. As claimed to be the most environmentally friendly and cost-efficient technique, bioremediation using indigenous bacteria offers excellent potential to be implemented in developing countries such as Indonesia. This study is a preliminary part of four-year research at formulating a bioremediation technique to restore mercury-contaminated soils, especially in agricultural areas. In this investigation, fifteen indigenous bacterial isolates were tested for their resistance to mercury using two different techniques: the agar plate method, namely the disk-diffusion technique, and a modified version of the cup-plate technique. Inhibitory zone diameter (IZD) was measured and compared using Bland-Altman analysis between two techniques with supplementation of HgCl2 2-100 ppm range to the Mueller-Hinton agar media. The disk-diffusion technique appeared to give inconsistent measurements of IZD along the increase of HgCl2 concentration, in which the highest IZD mean was obtained from samples with 8 and 10 ppm HgCl2. Meanwhile, the cup-plate technique shows a lower average of IZD compared to the disk-diffusion technique. This report provides insights on the resistance of potential bacteria for mercury bioremediation. Further study should consider the accuracy of the agar plate method to test the bacterial resistance to any particular compound. Keywords: bioremediation, cup-plate, disk-diffusion, inhibitory zone diameter, method accuracy.
Molecular taxonomy via DNA barcodes for species identification in selected genera of Fabaceae Wardani, I Gusti Ayu Kusuma; Amandita, Fitri Yola; Moura, Carina Carneiro de Melo; Gailing, Oliver; Siregar, Iskandar Z
Jurnal Pengelolaan Sumberdaya Alam dan Lingkungan (Journal of Natural Resources and Environmental Management) Vol 12 No 1 (2022): Jurnal Pengelolaan Sumberdaya Alam dan Lingkungan (JPSL)
Publisher : Pusat Penelitian Lingkungan Hidup, IPB (PPLH-IPB) dan Program Studi Pengelolaan Sumberdaya Alam dan Lingkungan, IPB (PS. PSL, SPs. IPB)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29244/jpsl.12.1.112-122

Abstract

Fabaceae is an invaluable plant family with considerable ecological and economic importances for example as food sources, bio-fertilizer, and medicinal plants. However, Fabaceae has been overexploited in Indonesia and several species belong to this family are critically endangered. Due to morphological similarity, rapid and accurate identification of Fabaceae species is essential to support its conservation efforts. Nowadays, species identification through DNA barcoding has become an effective taxonomic classification tool. This study was aimed to evaluate the effectiveness of chloroplast markers, matK and rbcL and the combination (matK+rbcL), as DNA barcodes for the identification of seleted genera in Fabaceae. The result showed that matK+rbcL and matK had the highest level of identification (90% and 82.05%) of the investigated genera, respectively. Additionally, matK had the highest mean of interspesific distance (0.134) and intraspecific distance (0.003). The combined barcode matK+rbcL had the highest correct identification rate when comparing the morphological with molecular identification. Furthermore, the best phylogenetic tree was obtained using Neighbor Joining method. Based on the overall performance, matK and matK+rbcL were the best barcodes for the selected genera in this study.