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Analisis Drug Likeness, Toksisitas GUSAR, dan Docking Senyawa Antidesma bunius sebagai Obat Hipokolesterolemik Fatmawati, Dwi Retno; Inacahya, Yunira Setio Putri
Biocaster : Jurnal Kajian Biologi Vol. 5 No. 3 (2025): July
Publisher : Lembaga Pendidikan, Penelitian, dan Pengabdian Kamandanu

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.36312/biocaster.v5i3.575

Abstract

Hypercholesterolemia is a major risk factor for cardiovascular disease and requires alternative therapies derived from natural products to minimize the side effects of synthetic drugs. This study aimed to evaluate the potential of bioactive compounds from Antidesma bunius as hypocholesterolemic drug candidates through an in silico approach, including drug likeness screening, toxicity prediction (GUSAR), and molecular docking against the HMG-CoA reductase enzyme (PDB ID: 1HWK). From 104 compounds identified via GC-MS, 52 met the Lipinski’s Rule of Five (Ro5) criteria, indicating favorable oral pharmacokinetics. Toxicity prediction using GUSAR revealed that most compounds had oral LD₅₀ values >2000 mg/kg and were classified as having low to non-toxic profiles according to OECD standards Compounds such as Farnesol, 3-Deoxy-d-mannoic lactone, and Ambrettolide were classified in toxicity class 5 to non-toxic based on their high LD₅₀ values, particularly through oral and subcutaneous routes, indicating a wide safety margin. Docking analysis showed that Ambrettolide (−6.5 kcal/mol) and Acenapthylene (−6.4 kcal/mol) had stronger binding affinities than Pravastatin (−6.2 kcal/mol), a standard control drug, suggesting that certain natural compounds from A. bunius may possess comparable or superior hypocholesterolemic activity. Furthermore, 2,4-Dihydroxy-2,5-dimethyl-3(2H)-furan-3-one displayed a promising combination of safety, pharmacokinetic properties, and binding affinity. These findings suggest that A. bunius contains several natural compounds with the potential to be developed into safe and effective herbal therapies for hypercholesterolemia.
Phylogenetic relationship of plastid large single copy genome and potential of ginsenoside compounds from Panax in Alzheimer disease Kinasih, Anggiresti; Ahmar, Rasyidah Fauzia; Fatmawati, Dwi Retno; Rivaldi, Muhammad; Suhaemi, Emi; Saputra, Novanda Eka; Haniyyah, Hernanda Afra
Biota Vol 18 No 1 (2025)
Publisher : Universitas Islam Negeri Mataram

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Abstract

Alzheimer’s disease (AD) is a progressive neurodegenerative disorder and the most prevalent cause of dementia, marked by cognitive decline and memory loss. Current treatments are largely symptomatic and do not halt disease progression, underscoring the urgent need for novel therapeutics. Natural products, such as Panax notoginseng, offer promising alternatives due to their structural diversity and multi-target potential. This study investigates the therapeutic potential of 125 terpenoid compounds identified from P. notoginseng, focusing on their relevance to AD. Eight ginsenosides demonstrated notable neuroprotective effects, including improvements in memory and cognitive function. Among them, Ginsenoside Rb1 and Notoginsenoside R1 exhibited low predicted toxicity via oral and intraperitoneal routes, indicating favorable safety profiles. Target prediction and molecular docking suggest these compounds interact with G protein-coupled receptors implicated in cognition and neuroprotection, such as dopaminergic, serotonergic, muscarinic, and adrenergic receptors. However, their deviation from Lipinski’s Rule of Five may limit oral bioavailability. To address this, nanotechnology-based delivery systems are proposed to enhance solubility, permeability, and drug-likeness. These findings support the continued exploration of P. notoginseng ginsenosides as potential anti-dementia agents and highlight nanotechnology's role in overcoming pharmacokinetic limitations