Biodiversitas Journal of Biological Diversity
Vol. 23 No. 5 (2022)

Construction of CRISPR/Cas9_gRNA-OsCKX2 module cassette and its introduction into rice cv. Mentik Wangi mediated by Agrobacterium tumefaciens

MARINA RUZYATI (Graduate Program of Bioscience, Faculty of Mathematics and Natural Sciences, Universitas Sebelas Maret. Jl. Ir. Sutami 36A, Surakarta 57126, Central Java, Indonesia)
ATMITRI SISHARMINI (Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development. Jl. Tentara Pelajar 3A, Bogor 16111, West Java, Indonesia)
ANIVERSARI APRIANA (Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development. Jl. Tentara Pelajar 3A, Bogor 16111, West Java, Indonesia)
TRI JOKO SANTOSO (Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development. Jl. Tentara Pelajar 3A, Bogor 16111, West Java, Indonesia)
EDI PURWANTO (Department of Agrotechnology, Faculty of Agriculture, Universitas Sebelas Maret. Jl. Ir. Sutami 36 A, Surakarta 57126, Central Java, Indonesia)
SAMANHUDI SAMANHUDI (Department of Agrotechnology, Faculty of Agriculture, Universitas Sebelas Maret. Jl. Ir. Sutami 36 A, Surakarta 57126, Central Java, Indonesia)
AHMAD YUNUS (Department of Agrotechnology, Faculty of Agriculture, Universitas Sebelas Maret. Jl. Ir. Sutami 36 A, Surakarta 57126, Central Java, Indonesia)



Article Info

Publish Date
09 May 2022

Abstract

Abstract. Ruzyati M, Sisharmini A, Apriana A, Santoso TJ, Purwanto E, Samanhudi, Yunus A. 2022. Construction of CRISPR/Cas9_gRNA-OsCKX2 module cassette and its introduction into rice cv. Mentik Wangi mediated by Agrobacterium tumefaciens. Biodiversitas 23: 2679-2689. Mentik Wangi is an aromatic superior rice variety from the tropical japonica group with high posture and low productivity. The tall plant posture causes Mentik Wangi rice to be prone to lodging, resulting in yield loss. Therefore, improvement of plant height and productivity of Mentik Wangi is still required. The sd-1 (OsGA20ox-2) and CKX2 genes are responsible for the semi-dwarf character and high productivity. The study aimed to construct a CRISPR/Cas9 cassette module carrying a gRNA of OsCKX2 gene and introduce this construct to Mentik Wangi rice mediated by an Agrobacterium tumefaciens vector strain LBA4404. The introduction of the CRISPR/Cas9_gRNA-GA20ox-2 cassette plasmid that was constructed in previous research into Mentik Wangi rice was also carried out. The results showed that the CRISPR/Cas9_gRNA-CKX2 cassette module had been successfully constructed using the Golden gate cloning method. The introduction of the CRISPR/Cas9_gRNA-CKX2 and CRISPR/Cas9_gRNA-GA20ox-2 cassette modules into Mentik Wangi rice resulted in 30 putative transformant lines that passed the hygromycin selection. PCR analysis showed that from the 30 transformant lines, 15 lines were positive for the hygromycin resistance gene. Further analysis is necessary to be conducted to identify the occurrence of mutagenesis in the OsCKX2 and GA20ox-2 target genes.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...