Biodiversitas Journal of Biological Diversity
Vol. 25 No. 11 (2024)

Genetic diversity of mangoes (Mangifera indica L.) and its relatives in Seliu Island, Belitung District, Indonesia based on Inter-Simple Sequence Repeat markers

DENIA DWI CITRA RESMI (Graduate Program of Plant Biology, Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Agatis, Bogor 16680, West Java, Indonesia)
TATIK CHIKMAWATI (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Agatis, Bogor 16680, West Java, Indonesia)
NINA RATNA DJUITA (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Agatis, Bogor 16680, West Java, Indonesia)
MIFTAHUL HUDA FENDIYANTO (Department of Biology, Faculty of Military Mathematics and Natural Sciences, Universitas Pertahanan. Jl. Sentul Raya, Bogor 16810, West Java, Indonesia)
DEWI RAHMAWATI (Southeast Asian Regional Centre for Tropical Biology. Jl. Raya Tajur Km. 6, Bogor 16134, West Java, Indonesia)



Article Info

Publish Date
05 Dec 2024

Abstract

Abstract. Resmi DDC, Chikmawati T, Djuita NR, Fendiyanto MH, Rahmawati D. 2024. Genetic diversity of mango (Mangifera indica L.) and its relatives in Seliu Island, Belitung District, Indonesia based on Inter-Simple Sequence Repeat markers. Biodiversitas 25: 4253-4264. Seliu Island is known as a mango island, but information on their identity, taxonomic status, and abundance of mango variety on this island has yet to be recorded. This study aimed to identify the genetic diversity of mangoes on Seliu Island. Fifteen Inter-Simple Sequence Repeat (ISSR) primers were used to profile the genetic diversity of 49 mango accessions from Seliu Island. The selected primers produced 193 polymorphic bands out of 222 (86.17%). All mango accessions on Seliu Island were identified and can be classified into eight species: Mangifera indica, Mangifera laurina, Mangifera zeylanica, Mangifera magnifica, Mangifera quadrifida, Mangifera caesia, Mangifera odorata, and Mangifera foetida. The genetic diversity among species was high, with a Shannon's information index of 0.334 and expected heterozygosity of 0.210. The unweighted pair group method with arithmetic average (UPGMA) dendrogram was created using a simple matching method, and all accessions were grouped into two main clusters according to their subgenus, Limus (Marchand) Kosterm and Mangifera. All accessions are also grouped according to their species. This study shows that the accessions from Seliu Island and West Java tend to cluster based on geographical origin. The study of mango genetic diversity using ISSR markers provided valuable information on the genetic relationships and variability among local mango cultivars on Seliu Island. This information can be used for breeding programs, conservation, and developing mango varieties.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...