Biodiversitas Journal of Biological Diversity
Vol. 26 No. 2 (2025)

Systematics molecular investigation of Palo fish (Betta sp.) in the Harau Valley, West Sumatra using the COI gene

UMMI KURNIA PUTRI (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Andalas. Jl. Raya Unand, Limau Manis, Padang 25163, West Sumatra, Indonesia)
DEWI IMELDA ROESMA (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Andalas. Jl. Raya Unand, Limau Manis, Padang 25163, West Sumatra, Indonesia)
DJONG HON TJONG (Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Andalas. Jl. Raya Unand, Limau Manis, Padang 25163, West Sumatra, Indonesia)



Article Info

Publish Date
20 Feb 2025

Abstract

Abstract. Putri UK, Roesma DI, Tjong DH. 2025. Systematics molecular investigation of Palo fish (Betta sp.) in the Harau Valley, West Sumatra using the COI gene. Biodiversitas 26: 698-705. Palo fish (Betta sp.) is a local ornamental fish in the Harau Valley, Lima Puluh Kota, West Sumatra, Indonesia, which was suspected to be a new species from the Betta of the Pugnax group based on the Cytochrome b gene. Molecular investigations using more reliable genes were needed to validate the taxonomic status of Palo fish and determine the phylogenetic relationship with other Betta species. The cytochrome oxidase I (COI) gene has been recognized for identification at the species level. Liver tissue samples were taken from eight Palo fish individuals from four Rangkak Hill tributaries in Harau Valley. Eight Palo fish and 44 comparison sequences were analyzed using the Aliview, IQ Tree, and MEGA VII programs. The 641 bp COI gene sequences analysis showed that Palo fish from four tributaries in Harau Valley had 100% nucleotide base similarity (identical), which shared the same haplotype. Palo fish have a close relationship with Betta stigmosa and have the least genetic distance to Betta cf. apollon (2.6%), followed by Betta ferox (3.1%) and Betta apollon (3.7%). The genetic distance values show the differences at the subspecies level within the same species. Palo fish from Harau Valley confirmed as Betta cf. stigmosa. Comprehensive studies on Betta species need to be carried out to complete the systematics of the Betta group.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...