Journal of Microbiology, Biotechnology and Conservation
Vol. 2 No. 2 (2026): Journal of Microbiology, Biotechnology and Conservation (jMBC)

Analisis Hubungan Kekerabatan Famili Felidae (Ordo Karnivora; Kelas Mamalia) Berdasarkan Sekuens Gen Cytochrome-B (CytB) Mitokondria

Fatahillah Ardhani (University of Mataram)
Ida Ayu Dewi Lola Valastri (University of Mataram)
Khusnul Khotimah (University of Mataram)
Faturrahman (University of Mataram)



Article Info

Publish Date
24 May 2026

Abstract

Species identification within the family Felidae is often challenged by overlapping morphological characteristics resulting from hybridization, necessitating the use of genetic approaches. This study aimed to analyze the phylogenetic relationships and evolutionary history of 40 Felidae species based on mitochondrial Cytochrome b (CytB) gene sequences. This in silico study utilized secondary data obtained from GenBank, which were analyzed using MEGA 12 for sequence alignment, nucleotide composition analysis, and phylogenetic tree reconstruction using the Maximum Likelihood method with 1,000 bootstrap replicates, followed by validation using DrPhylo. The results showed a predominance of transition mutations, with a high R ratio (9), as well as significant codon usage bias. Phylogenetic reconstruction divided the family Felidae into eight major clades supported by high bootstrap values, namely Panthera, Neofelis, Pardofelis, Prionailurus, Lynx, Leopardus, Felis, and a combined Puma group. The genus Otocolobus was identified as the oldest lineage, diverging earliest from the other lineages. The M-Grid test confirmed the validity of the major clade groupings, with confidence levels approaching 1.00. It can be concluded that the CytB gene is an effective and reliable genetic marker for phylogenetic studies of the family Felidae.

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Journal Info

Abbrev

ljmb

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Chemistry Environmental Science Immunology & microbiology

Description

The journal prioritizes papers in the following areas: Basic and Applied Microbiology Biotechnology and its applications in various aspects of life Bioinformatics Microbiome Molecular Biology and Genetics Conservation of Biota and Environment All organisms related to microbial communities, including ...