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Arief Gunawan
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ifrj.puslitbangkan@gmail.com
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INDONESIA
Indonesian Fisheries Research Journal
ISSN : 08538980     EISSN : 25026569     DOI : -
Indonesian Fisheries Research Journal published in Indonesia by Center for Fisheries Research. Indonesian Fisheries Research Journal publishes research results on resources, fisheries biology, management, environment related to marine, coastal and inland waters.
Arjuna Subject : -
Articles 300 Documents
USING DNA BARCODE TO IMPROVE THE IDENTIFICATION OF MARINE FISH LARVAE, CASE STUDY COASTAL WATER NEAR JAKARTA AND BANDA SEA, INDONESIA Arif Wibowo; Anthony Sisco Panggabean; Achmad Zamroni; Asep Priatna; Helman Nur Yusuf
Indonesian Fisheries Research Journal Vol 24, No 1 (2018): (June) 2018
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (338.183 KB) | DOI: 10.15578/ifrj.24.1.2018.37-44

Abstract

The sustainability of the exploitation of the Indonesian fishes depends heavily on many of fish’s basic information including both larvae distribution and dispersal. However, the identification of fish larvae and juvenile to species is very limited. In this study, we employed DNA barcoding techniques to identify marine fish larvae to a species level in Jakarta Bay and Banda Sea by comparing the querries with sequences from adult stage as reference library to contribute on biodiversity information on that particular area. The result revealed that in Jakarta Bay, the molecular marker of a 471 bp region of the mitchondrial cyctochrome c oxidase I gene (COI) has been successfully found to be species-specific, genetic distance within species (0.0 - 1.30 percent). There are total of 8 families, 5 genera and 5 species from a total 15 successful PCR that could be used to calculate the accuracy of larval fish identification in three taxonomic categories. Meanwhile in Banda Sea, for the adult specimens, after some of PCR experiment, we have successfully amplified 27 individuals, only 8 sequences available. There are a total 326 eggs and larvae which been collected from 19 stations, of the 28 successfully amplified PCR samples, 11 sequences were available for DNA analysis and at least 10 species used Banda Sea and surrounding area as their spawning ground. We prove the ability of COI barcodes to identify species level resolution from query sequences and to classify species from distinct geographical origins and determine of how the data retrieved give important information for proposing plans for conserving and managing of fisheries in the sea waters.
SPECIES COMPOSITION, DISTRIBUTION, AND POTENTIAL YIELD OF DEEP SEA SHRIMP RESOURCES IN THE WESTERN SUMATERA OF THE INDIAN OCEAN EEZ OF INDONESIAN WATERS Ali Suman; Wudianto Wudianto; Gatut Bintoro
Indonesian Fisheries Research Journal Vol 12, No 2 (2006): (December 2006)
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (3681.423 KB) | DOI: 10.15578/ifrj.12.2.2006.159-167

Abstract

study on the catch composition, distribution and potential yield of deep sea shrimp in the westem off sumarera waters was conducled on June to July 2005 using RV Baruna Jaya lV with trawl net. This study was basicarry caffied out by emproying swept area method
FISHING STRATEGY OF THE INDONESIAN TUNA LONGLINERS IN INDIAN OCEAN Lilis Sadiyah; Budi lskandar Prisantoso
Indonesian Fisheries Research Journal Vol 17, No 1 (2011): (June 2011)
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (5631.769 KB) | DOI: 10.15578/ifrj.17.1.2011.29-35

Abstract

Information on fishing strategy is essential to manage the Indonesian tuna fishery. Therefore, it is important to attempt to characterise the fishing strategies of the fishery.
PERFORMANCE OF A FISHERY HARVESTING DIFFERENT MINIMUM SHRIMP SIZES IN THE ARAFURA SEA Purwanto Purwanto
Indonesian Fisheries Research Journal Vol 18, No 2 (2012): (December 2012)
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1478.189 KB) | DOI: 10.15578/ifrj.18.2.2012.79-89

Abstract

Avoiding overfishing and ensuring the sustainability of the shrimp stock in the Arafura Sea are of prime importance for fishery management. Exploited shrimp stock consists of several cohorts, and grows considerably with age. When the shrimps are caught before the cohort has had the opportunity to achieve its optimum biomass level, the fishery will lose much of the potential benefit that could be achieved by catching them in the near future. Therefore, a bio-economic approach was developed, on the basis of the length-based Thompson & Bell model, to evaluate the impact of harvesting different size of shrimps on fishery performance. The result of analysis shows that the fishery achieved the optimal total profit when the shrimp size at first-capture and fishing mortality were 29 mm CL and 0.50, respectively. The total profit to the fishery would be sub-optimal when the shrimp size at-first-capture was smaller or larger than the optimal size. Further, it was more economical to harvest shrimps at the larger size and higher fishing mortality, and resulting in higher total profit, when natural mortality decreased.
DYNAMICS OF GEARS, FLEETS, CATCH AND FISHING SEASON OF SMALLSCALE TUNA FISHERIES IN LABUHAN LOMBOK, WEST NUSA TENGGARA Bram Setyadji; Budi Nugraha
Indonesian Fisheries Research Journal Vol 21, No 2 (2015): (December 2015)
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (652.022 KB) | DOI: 10.15578/ifrj.21.2.2015.99-107

Abstract

In Indonesia, about 80% of fishing activities are small-scale and play major role both economically and socially. Previous studies mostly concentrated in Java, while in eastern part of Indonesia the information still scarce and limited. The study was conducted from January to December 2013, describes in detail the gears, fleets and catch dynamics of the small-scale tuna fisheries operating based in Labuhan Lombok Coastal Fishing Port (PPP. Labuhan Lombok). Small-scale tuna fishery in Labuhan Lombok are characterized by the small boats less than 10 GT, operating both troll line and hand line simultaneously, targeting large tuna, skipjack tuna and small tuna. Fishing season starts from April to August and influence by southwest monsoon wind and the presence of middleman as the connector between fishers and the market are the main character of the small-scale fisheries business in this area.
GENETIC CHARACTERIZATION OF LONGTAIL TUNA Thunnus tonggol (BLEEKER, 1851) BASED ON PARTIAL SEQUENCE OF 16S rRNA MITOCHONDRIAL GENE Achmad Zamroni; Suwarso Suwarso; Arif Wibowo
Indonesian Fisheries Research Journal Vol 24, No 2 (2018): (December) 2018
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (176.765 KB) | DOI: 10.15578/ifrj.24.2.2018.83-89

Abstract

Although the Longtail tuna (Thunnus tonggol) is an important fish in Indonesia, the population structure has not been investigated. In this study, the genetic differences in geographic scale are analyzed to provide a clear picture of the structure of T. tonggol populations along a transect stretching from Pemangkat (western Kalimantan) to Pekalongan in the Java Sea. We also analyzed SNPs in the mitochondrial 16S rRNA gene of T. tonggol as potential molecular marker for the identification of the origin within species. In total, three polymorphic sites (all represent singleton dimensions) were identified in the sequence analysis of the 570-bp fragment among a total of 97 T. tonggol individuals from Pekalongan and Pemangkat. Based on these polymorphic sites, four haplotypes were identified. The Pemangkat samples had higher amount of haplotype and nucleotide diversity (h = 0.1556 ± 0.0680 and  = 0.000277 ± 0.000432), meanwhile samples Pekalongan showed lower levels of diversity (h = 0.0400 ± 0.0380 and  = 0.000070 ± 0.000209). The study revealed a single, intermixing population of T. tonggol across the sampled location. No significant structuring was observed between other pairwise comparisons, indicating gene flow between geographically adjacent locations.
POPULATION CHARACTERISTICS OF MUD CRAB (Scylla serrata) IN THE WATERS OF KENDARI BAY AND SURROUNDING AREAS Ali Suman; Ap'idatul Hasanah; Khairul Amri; Andina Ramadhani Putri Pane; Pratiwi Lestari
Indonesian Fisheries Research Journal Vol 24, No 2 (2018): (December) 2018
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (282.899 KB) | DOI: 10.15578/ifrj.24.2.2018.117-124

Abstract

The high market demand for mud crabs (Scylla serrata) has caused intensive fishing for this resources and tended to threaten their sustainability. Studies of population characteristics are the main bases for formulating management measures for sustainable utilization. The purpose of this study was to determine the population characteristics of mud crabs in the waters of Kendari Bay and its surrounding waters. The study was conducted from January to November 2016 using survey method. The study results revealed that the mud crab growth pattern in Kendari Bay was negative allometric and that the ratio of males and females was imbalance. The length at first maturity (Lm) was at a carapace width of 109.8 mm. The growth rate (K) was 1.01 per year and the maximum carapace width (L) was 206 mm. The estimated total mortality rate (Z), fishing mortality rate (F), and natural mortality rate (M) were 3.20 per year, 2.17 per year, and 1.03 per year, respectively. The exploitation rate (E) was 0.68 per year. Therefore, the exploitation rate had reached 136%, which is categorized as overfishing. In order to ensure the sustainability of the mud crabs, there is needed to apply the precautionary approach, such as reducing fishing effort by 36% of the current situation.
SPATIAL AND TEMPORAL DISTRIBUTION OF FISH IN THE FLOODPLAIN OF KUMBE RIVER. PAPUA Yoga Candra Ditya; Arif Wibowo; Husnah Husnah
Indonesian Fisheries Research Journal Vol 24, No 2 (2018): (December) 2018
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (362.038 KB) | DOI: 10.15578/ifrj.24.1.2018.1-13

Abstract

Expansion of land clearance mostly for plantation is the big issue in Indonesia including in Papua. Its effect is not only to the catchment area but it also affects fisheries resources. The stress effect occurs worsen in Kumbe River and its floodplain area by the present of introduced fish species such as snakehead (Channa striata) and nile tilapia (Oreochromis niloticus). Spatial and temporal fish distributions are important information for the sustainable fisheries resource and theirs utilization. Study on spatial and temporal fish distribution covering four types of swamp ecosystem of Kumbe River was conducted during April-September 2014 and Mei-November 2015. Explorative field survey was conducted in four different ecosystem types in Kumbe River floodplain areas. Ecological data was collected from four sampling sites in each ecosystem type during high water precipitation (April and May) and low water precipitation (August. September and November). and fish samples were collected with different mesh sizes of gillnet fishing experiment conducted in four sampling sites. Parameters measured were fish important relative index and physical and chemical water quality parameters. The results noted 18 fish species deriving from 13 families. The Arridae with its blue catfish (Neoarius graeffei) dominated almost 90% of fish catch both spatial and temporal. Hydrological dynamic seems the key of trigger factor for the spatial and temporal distribution of fish and dynamic of habitat and water quality characteristic in the floodplain of Kumbe River.
POPULATION DYNAMICS OF MALAYAN LEAF FISH (Pristolepisgrooti Blkr.) IN RANAU LAKE, SOUTH SUMATRA Sevi Sawetri; Subagdja Subagdja; Dina Muthmainnah
Indonesian Fisheries Research Journal Vol 24, No 2 (2018): (December) 2018
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (391.029 KB) | DOI: 10.15578/ifrj.24.2.2018.125-131

Abstract

The Malayan leaf fish or locally named as kepor (Pristolepis grooti) is one of important biotic components in Ranau Lake ecosystems. This study aimed to estimate population dynamic and exploitation rate of kepor in Ranau Lake, South Sumatera. The population parameters are estimated based on length frequency data which were collected in March to October 2013. Growth parameters and fishing mortality rates were calculated using FiSAT software package. The results showed that kepor’s growth was negative allometric, which tended to gain length faster than weight. Kepor population was dominated (42%) by individual length of 10.0 to 11.0 cm. Predicted length infinity (L) was 17.28 cm with high value of growth rates (K) of 1.4 year-1. The natural mortality rate (M) is 2.57 year-1, the fishing mortality rate (F) is 5.36 year-1 and total mortality rate (Z) is 7.93 year-1. The exploitation rate of Malayan leaf fish in Ranau Lake (E = 0.68 year-1) has passed the optimum score.  
SOME POPULATION PARAMETERS AND EXPLOITATION STATUS OF FOURFINGER THREADFIN (Eleutheronema tetradactylum Shaw, 1804) IN TARAKAN WATERS, NORTH KALIMANTAN Tirtadanu Tirtadanu; Umi Chodrijah
Indonesian Fisheries Research Journal Vol 24, No 2 (2018): (December) 2018
Publisher : Research Center for Fisheries

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (297.337 KB) | DOI: 10.15578/ifrj.24.2.2018.91-98

Abstract

Information on exploitation status of fourfinger threadfin (Eleutheronema tetradactylum Shaw, 1804) is important for sustainable gillnet fisheries management in Tarakan, North Kalimantan  waters. In an attempt of providing scientific data and information on the exploitation status of this species, a research work was conducted from January to November 2016 in Selumit landing place. Fish sampling was done by trained enumerator on bottom gillnet catches landed through semi-regular observation. A total of 1964 specimens were collected and measured. The results showed that the size ranged between 16-70 cmFL with an average of 37.72 ± 0.36 cmFL. The length at first captured (Lc) of about 38.5 cmFL, was smaller than the length at first mature of female (Lm) of 39.6 cmFL. The growth pattern was negative allometry. By applying von Bertalanffy growth model, it was found that growth model for this species was L(t)=75,8(1-e0,3(t+0,035)). Exploitation rate (E) was 0,47. It showed that the exploitation status of fourfinger threadfin in Tarakan Waters was still sustainable.

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