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INDONESIA
Journal of Tropical Biodiversity and Biotechnology
Published by Universitas Gadjah Mada
ISSN : 25409573     EISSN : 25409581     DOI : -
Core Subject : Science, Agriculture, Social,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Environmental Science Immunology & microbiology
Journal of Tropical Biodiversity and Biotechnology (JTBB) is an authoritative source of information concerned with the advancement of tropical biology studies in the Southeast Asia Region. It publishes original scientific work related to a diverse range of fields in tropical biodiversity, functional biology, and biotechnology.
Arjuna Subject : -
Articles 15 Documents
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Search results for , issue "Vol 6, No 3 (2021): December" : 15 Documents clear
Effect of Iron Toxicity on the Growth of Calliandra calothyrsus and Leucaena leucocephala Seedlings Mohammad Agus Salim; Luluk Setyaningsih; Imam Wahyudi; Sri Wilarso Budi R
Journal of Tropical Biodiversity and Biotechnology Vol 6, No 3 (2021): December
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jtbb.65654

Abstract

Iron (Fe) is a micro essential needed by plants in small amounts and can be toxic when available in large quantities. This study aimed to evaluate how Fe exposure affects the growth of C. callothyrsus and L. leucocephala seedlings. This study used a completely randomized design with factorial, where the first factor consisted of two levels of seedlings (C. calothyrsus and L. leucocephala), and the second factor consisted of Fe concentration which consisted of 8 levels (0, 0.25, 0.5, 0.75, 1, 1.25, 1.5, and 1.75 mM). The results showed that treatment of seedlings species and concentration of Fe was able to significantly affect the growth parameters (height, root length, root dry weight, shoots, and plant dry weight) of seedlings. The control treatment (without Fe) showed the highest growth response compared to those treated with Fe exposure and an increase in Fe concentration was able to reduce all growth parameters in both seedlings. The 0.5 mM Fe concentration reduced all growth parameters of C. calothyrsus drastically, while in L. leucocephala, the Fe 0.75 concentration was able to decrease all growth parameters drastically. The tolerance index of both seedlings decreased with increasing Fe concentration. The rate of photosynthesis did not show a significant difference between treatments, meanwhile, it had a significant effect on chlorophyll affect chlorophyll (a, b, and total chlorophyll) and carotenoid content. The highest Fe content in C. calothyrsus seedlings was at a concentration of 1.5 mM (4.40%), while in L. leucocephala seedlings, the highest Fe content was at 1.7 mM (2.87%). 
Intergeneric Hybridization between Phalaenopsis 2166 and Vanda ‘saint valentine’: Characterization of Parents Using ndhE cpDNA Partial Sequence Murni Dwiati; Agus Hery Susanto
Journal of Tropical Biodiversity and Biotechnology Vol 6, No 3 (2021): December
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jtbb.65658

Abstract

An intergeneric cross between Phalaenopsis 2166 and Vanda ‘saint valentine’ has successfully produced protocorms that will be grown further to form seedlings. The present study aims to genetically characterize both parents by using ndhE partial gene as its sequence is shown polymorphic among five orchid genera of the subtribe Oncidiinae. The results reveal that the ndhE partial sequences of Phalaenopsis 2166 and Vanda ‘saint valentine’ are considerably homologous with those of Oncidium. However, alignment of ndhE partial sequences between both parents shows only 58% similarity, leading to the conclusion that a relatively high genetic difference between them may occur. 
Molecular Identification of Mudskipper Fish (Periophthalmus spp.) from Baros Beach, Bantul, Yogyakarta Katon Waskito Aji; Tuty Arisuryanti
Journal of Tropical Biodiversity and Biotechnology Vol 6, No 3 (2021): December
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jtbb.66391

Abstract

Mudskipper fish is amphibious fish belonging to the family Gobiidae. Coastal communities widely consume mudskipper to meet their animal protein needs. Mudskipper is primarily cryptic species that are morphologically difficult to identify and distinguish from other mudskipper fish species. Consequently, it can be confused with the naming of mudskipper fish species and can affect the conservation efforts of the fish in their habitat. One of the molecular approaches that can be used to identify the fish species quickly and accurately is DNA barcoding using the COI mitochondrial gene. However, the research on the identification of mudskipper fish in Indonesia is still very limited. Therefore, this study aimed to identify 26 mudskipper fish from Baros Beach, Bantul, Yogyakarta, using COI mitochondrial gene as a molecular marker for DNA barcoding. The method used in this study was a PCR method with universal primers, FishF2 and FishR2. The data obtained were then analyzed using GeneStudio, DNASTAR, BLAST, Identification Engine, Mesquite, MEGAX, and BEAST. The analysis was conducted to obtain similarity, genetic distance and reconstruct a phylogenetic tree. The result revealed that all 26 samples of mudskippers collected from Baros Beach were identified in one genus, namely Periophthalmus, and consisted of 3 species, namely P. kalolo (16 samples), P. argentilineatus (9 samples), and P. novemradiatus (1 sample). Furthermore, this study also discovered a suspected cryptic species in P. argentilineatus with a genetic distance of 5.46-5.96% between clade E, F compared with clade G. Further morphological studies are needed to confirm the species status of these three clades before solidly proclaim that they are cryptic species. 
Shallow-water Sponges from a High-sedimentation Estuarine Bay (Brunei, Northwest Borneo, Southeast Asia) Edwin Setiawan; David Relex; David J. Marshall
Journal of Tropical Biodiversity and Biotechnology Vol 6, No 3 (2021): December
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jtbb.66435

Abstract

Tropical estuaries are important habitats for invertebrates including sponges, a group of marine organisms that fulfill significant ecological roles and provide ecosystem services. Here, we describe the sponge fauna from Pulau Bedukang, a small island in a turbid, variable salinity, acidified and eutrophic estuarine bay (Brunei Darussalam, northwest Borneo). We present records for 14 morphological species (OTUs). Six of these species belong to the Haplosclerida, an order of shallow-water sponges that usually tolerate more variable and extreme physical conditions. Our baseline data contribute to the regional biogeography of sponges and present a reference source for ecological studies on marine animals inhabiting variable estuarine environments. This is the first known record of sponges from the northwest Bornean region of the South China Sea that are not associated with a coral ecosystem; other studies have concerned Singapore, peninsular Malaysia, Thailand, Cambodia, Vietnam, southern China, and Taiwan.  
Community Structure of Dragonfly (Ordo: Odonata) in Natural Forest and Tourist Sites Petungkriyono Forest, Central Java, Indonesia Nur Apriatun Nafisah; R.C.Hidayat Soesilohadi
Journal of Tropical Biodiversity and Biotechnology Vol 6, No 3 (2021): December
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jtbb.67328

Abstract

Petungkriyono forest is a tropical rainforest with high biodiversity. The increasing tourism activities in Petungkriyono lead to land conversion. Dragonfly (order Odonata) is a good bioindicator for aquatic and terrestrial. This study aimed to compare the community structure of Odonata in natural forests and tourist sites. The method of collecting imago Odonata was done by direct searching, samples were captured using sweep netting. The results showed that the dragonflies found in all locations consisted of the same family, 2 families (Gomphidae and Libellulidae) from the suborder Anisoptera and 6 families (Calopterygidae, Chlorocyphidae, Coenagrionidae, Euphaidae Platycnemididae, and Platystictidae) from the suborder Zygoptera. The total species of dragonflies found in Sokokembang were 15 species with a total of 293 individuals, Tirta Muncar 13 species of 287 individuals, Karanggondang 17 species of 276 individuals, and Curug Lawe 14 species of 242 individuals. The highest relative abundance of individuals was in the natural forest of Sokokembang is Drepanosticta spatulifera (26.28%) and in Karanggondang Vestalis luctuosa (24.64%), while in the tourist forests of Tirta Muncar and Curug Lawe were Euphaea variegata (34.84% and 28.51 %). The structure of the Odonata community is based on the Shannon-Wiener diversity index in the natural forests of Sokokembang (2.18) and Karanggondang (2.21) at the tourist sites of Tirta Muncar (1.84) and Curug Lawe (2.11). The results showed that the structure of the Odonata community based on the level of the diversity index value, evenness index, and dominance index in natural forests and tourist sites in Petungkriyono forest was not significantly different. 

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