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All Journal Indonesian Journal of Forestry Research JURNAL PEMULIAAN TANAMAN HUTAN
I. L. G. Nurtjahjaningsih
Center for Forest Biotechnology and Tree Improvement Research, Development and Innovation Ministry of Environment and Forestry
Agriculture, Biological Sciences & Forestry

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 1 
PARENT IDENTIFICATION IN A MULTI LOCATION TRIAL SEED ORCHARD OF ACACIA MANGIUM USING MICROSATELLITE MARKERS I. L. G. Nurtjahjaningsih
Indonesian Journal of Forestry Research Vol 3, No 1 (2016): Indonesian Journal of Forestry Research
Publisher : Secretariat of Agency for Standardization of Environment and Forestry Instruments

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20886/ijfr.2016.3.1.19-26

Abstract

Variation of  parent gametes' contribution might affect the growth patterns among offspring produced from seed orchards. This paper studies the mating system statuses and to identify parent trees that produce good growth performance of  offspring in seedling seed orchard of A. mangium. The study was conducted in two seed orchards, i.e. a first generation seedling seed orchard (F1 SSO) of  A. mangium, used as the parent population hereafter and a multi location trial (MLT) as an offspring population. Based on 10 microsatellite markers, mating system in the F1 SSO was under panmictic equilibrium condition. The good growth trees in the MLT originated from various parent genes contribution in the F1 SSO. Several behaviors were observed: a). the best trees in MLT dominantly originated from singlepair trees, between maternal and paternal trees, in F1 SSO; b). a maternal tree was pollinated by two paternal trees; c). a paternal tree pollinated several maternal trees. Flowering synchronization and genetic compatibility among trees might be responsible for these mating system patterns. In order to maximize seeds production, studies on male and female flowers characteristic should be employed to assess flowering synchronization among individual trees in the seed orchard.
KERAGAMAN GENETIK Aquilaria malaccensis DARI BANGKA BARAT PROVINSI KEPULAUAN BANGKA BELITUNG DAN IMPLIKASINYA UNTUK PENGELOLAAN TEGAKAN BENIH I. L. G. Nurtjahjaningsih; AYPBC Widyatmoko; Liliek Haryjanto; Yuliah Yuliah; Yayan Hadiyan
Jurnal Pemuliaan Tanaman Hutan Vol 14, No 2 (2020): Jurnal Pemuliaan Tanaman Hutan
Publisher : Center for Forest Biotechnology and Tree Improvement (CFBTI)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20886/jpth.2020.14.2.121-128

Abstract

Aquilaria malaccensis (agarwood) is a native species to Indonesia, it produces fragrance. Aim in this study was to assess genetic diversity and structure of A. malaccensis in order to manage seed stand to produce high quality and quantity seeds/seedlings. Leaf samples for DNA template were collected from  populations at western Bangka i.e. Air Gantang, Pelangas, and Simpang Gong. Amplifications of 14 RAPD markers were confirmed; 42 DNA samples of A. malaccensis were analysed using RAPD markers. Parameters of genetic diversity within population i.e. private alleles (PA) and expected heterozygosity (H) were calculated using GeneAlex software. Genetic structure among populations were determined as genetic distance (Da), Analysis Molecular of Variance (AMOVA), a neighbor-joining tree, were calculated using GeneAlex and PopTrew software. Eleven out of 14 RAPD markers were produced 104 stable and polymorphic alleles; PE were found at Air Gantang and Pelangas, 1 and 2 alleles, respectively. The H ranged between 0.133 (Simpang Gong) and 0.328 (Pelangas). The Da was moderate (0.099). AMOVA showed significant genetic diversity among populations (14%). A neighbor-joining tree showed the populations divided into two clusters with high boostrap value, and concordance with their geographical positions. Restricted gene flow might cause a high genetic relationship among populations. Low HEE in Simpang Gong caused this population was priored to being conserved; Air Gantang and Pelangas should be designed as different conservation units due to the population contained different private alleles.
Co-Authors AYPBC Widyatmoko Liliek Haryjanto Yayan Hadiyan Yuliah Yuliah