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Perbandingan Tiga Metode Transformasi Agrobacterium Untuk Pencarian Gen-gen Terkait Toleransi Kekeringan Menggunakan Transposon Ac/Ds pada padi cv. Batutegi Mulyaningsih, E. S.; Aswidinnoor, H.; Sopandie, D.; Ouwerkerk, P.B. F.; Nugroho, S.; Loedin, I.H. Salmet
JURNAL BIOLOGI INDONESIA Vol 6, No 3 (2010): JURNAL BIOLOGI INDONESIA
Publisher : Perhimpunan Biologi Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14203/jbi.v6i3.3144

ABSTRACTTransformation Strategy for Indonesian Indica Rice in Attempt to Discover Drought-TolerantRelated Genes Using of Transposon Ac/Ds. Attempt to identify, isolate the gene, and study forgene function for several agronomical traits have been done including some drought toleranttraits. Japonica rice cultivars have been used due to its higher efficiencies compared withindica cultivars. Two plasmids namely pNU400 and pUR224 were used to generate mutants ofthese cultivars (Batutegi dan Kasalath cultivars). Those plasmids contain an element calledActivator (Ac) and Dissociator (Ds) respectively. The pNU400 contains GFP (green flourescensprotein) as a selectable marker, whereas the pUR224 contains hygromycine resistant gene andgusA as a reporter gene. Each plasmid was transformed into rice genome of Batutegi andKasalath cultivars by Agrobacterium mediated transformation using three methods oftransformation (A, B and C). The transformation method A was not suitable for both cultivars,where none of plantlets were produced from pNU400 and pUR224 plasmids. The transformationmethod B produced some plantlets from the Kasalath cultivar only using pUR224 plasmid.The transformation method C was the best method to produce transgenic plants from bothcultivars (Batutegi and Kasalath), using both plasmids (pNU400 and pUR224). The PCR analysisshowed that 19 and 9 plants of Batutegi and Kasalath contained both gusA and hpt genesrespectively. None of those plants contained of gusA gene. Southern blot analysis revealed 3independent lines from Batutegi dan 7 independent lines from Kasalath. The integration of Actransposon was analyzed based on expression gfp gene when observed under UV dark reader.This research has proved that indica rice cultivars, especially the Batutegi cultivar of Indonesianorigin, could be transformed. The cultivar could be used as plant model for the indicatransformation.Key words: transformation, drought tolerant, indica rice, Ac/Ds transposons, Agrobacterium.

PERBANDINGAN TIGA METODE TRANSFORMASI AGROBACTERIUM UNTUK PENCARIAN GEN-GEN TERKAIT TOLERANSI KEKERINGAN MENGGUNAKAN TRANSPOSON AC/DS PADA PADI CV. BATUTEGI Mulyaningsih, E. S.; Aswidinnoor, H.; Sopandie, D.; Ouwerkerk, P.B. F.; Nugroho, S.; Loedin, I.H. Salmet
JURNAL BIOLOGI INDONESIA Vol 6, No 3 (2010): JURNAL BIOLOGI INDONESIA
Publisher : Perhimpunan Biologi Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14203/jbi.v6i3.3144

ABSTRACTTransformation Strategy for Indonesian Indica Rice in Attempt to Discover Drought-TolerantRelated Genes Using of Transposon Ac/Ds. Attempt to identify, isolate the gene, and study forgene function for several agronomical traits have been done including some drought toleranttraits. Japonica rice cultivars have been used due to its higher efficiencies compared withindica cultivars. Two plasmids namely pNU400 and pUR224 were used to generate mutants ofthese cultivars (Batutegi dan Kasalath cultivars). Those plasmids contain an element calledActivator (Ac) and Dissociator (Ds) respectively. The pNU400 contains GFP (green flourescensprotein) as a selectable marker, whereas the pUR224 contains hygromycine resistant gene andgusA as a reporter gene. Each plasmid was transformed into rice genome of Batutegi andKasalath cultivars by Agrobacterium mediated transformation using three methods oftransformation (A, B and C). The transformation method A was not suitable for both cultivars,where none of plantlets were produced from pNU400 and pUR224 plasmids. The transformationmethod B produced some plantlets from the Kasalath cultivar only using pUR224 plasmid.The transformation method C was the best method to produce transgenic plants from bothcultivars (Batutegi and Kasalath), using both plasmids (pNU400 and pUR224). The PCR analysisshowed that 19 and 9 plants of Batutegi and Kasalath contained both gusA and hpt genesrespectively. None of those plants contained of gusA gene. Southern blot analysis revealed 3independent lines from Batutegi dan 7 independent lines from Kasalath. The integration of Actransposon was analyzed based on expression gfp gene when observed under UV dark reader.This research has proved that indica rice cultivars, especially the Batutegi cultivar of Indonesianorigin, could be transformed. The cultivar could be used as plant model for the indicatransformation.Key words: transformation, drought tolerant, indica rice, Ac/Ds transposons, Agrobacterium.

Cemaran Timbal (Pb) dan Arsen (As) pada Susu Sapi Perah yang Diberi Pakan Limbah Organik Pasar di Peternakan Sapi Perah Kebon Pedes Bogor Salundik Salundik; Suryahadi Suryahadi; S.S. Mansjoer; D. Sopandie; W. Ridwan
Jurnal Peternakan Indonesia (Indonesian Journal of Animal Science) Vol 14, No 1 (2012): Jurnal Peternakan Indonesia
Publisher : Universitas Andalas

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.25077/jpi.14.1.308-318.2012

The aims of livestock development is to increase both quality and quantity production, in the same time, ensure the safety of the product. The consumers need to concern about food safety of livestock products because it is related to human’s health. The research was conducted to determine food safety of dairy condition by detecting heavy metal on fresh milk produce by Kebon Pedes Dairy Farm. This research was utilited survey method and cases study and the result analyzed descriptively. The parameters measured are heavy metal Plumbum (Pb) and Arsenic (As) contents by using Atomic Absorption Spectrophotometer (AAS) machine. The result of the study indicated that Pb and As undetected in fresh milk. That’s value lower than standar maxsimum limit according SNI 01-3141-1998 were 0,3 ppm and 0,5 ppm.

FISIOLOGI DAYA ADAPTASI KEDELAI (Glycine max (L.) Merr.) TERHADAP CEKAMAN pH RENDAH DENGAN Al TINGGI Supijatno, ,; Sopandie, D.; Jusuf, M.; Harran, S.
Jurnal Agronomi Indonesia (Indonesian Journal of Agronomy) Vol. 23 No. 2 (1995): Buletin Agronomi
Publisher : Indonesia Society of Agronomy (PERAGI) and Department of Agronomy and Horticulture, Faculty of Agriculture, IPB University, Bogor, Indonesia

Two AI-tolerant genotypes (KB 44001 and Genjah Jepang) and two AI-sensitive genotypes of soybean (Kedelai Lumut and KB 46015) were subjected to Al concentration (1.50 mM Al with pH 4.0) in hydroculture for 3 weeks; the growth and their physiological responses were identified by measuring the changes of pH media, NO3ˉ /NH4+ uptake, ion absorption and organic acid content in the tissues. The result revealed that Al-tolerant genotypes soybean show a much better growth than the sensitive genotypes. Moreover, the tolerant genotypes showed the different responses to Al stress; they changed the pH media more significantly, accumulated less Al in the roots and accumulated more oxalate acid than the sensitive genotypes. Both the tolerant and sensitive genotypes had similar pattern n in N03ˉ /NH4+ uptake and other cation uptake. The results suggested that tolerance of soybean genotypes to Al toxicity is associated with their ability in the exclusion AI.

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