Biology, Medicine, & Natural Product Chemistry
Vol 15, No 1 (2026)

Mitochondrial 16S rRNA Characterization of Heterotrigona itama Colonies from Central Lampung, Indonesia

Priyambodo Priyambodo (Universitas Lampung)
Aditya Fahrezi (Universitas Lampung)
Elly Lestari Rustiati (Universitas Lampung)
Enny Saswiyanti (Lampung Veterinary Investigation Center)
Eko Agus Srihanto (Lampung Veterinary Investigation Center)
Aulia Imtitsal (Universitas Lampung)
Dian Neli Pratiwi (Institut Teknologi Sumatera)
Nindy Permatasari (Politeknik Negeri Lampung)



Article Info

Publish Date
07 Jul 2026

Abstract

Stingless bees play important ecological and economic roles in tropical ecosystems, yet molecular baseline data for many regions in Sumatra remain limited. This study aimed to characterize mitochondrial genetic variation of Heterotrigona itama colonies from Punggur Subdistrict, Central Lampung, Indonesia, using partial 16S rRNA sequences. Three managed colonies were analyzed through PCR amplification and Sanger sequencing, followed by sequence alignment, BLAST comparison, genetic distance estimation using the Kimura-2-Parameter model, and phylogenetic reconstruction. All samples produced consistent amplicons of approximately 500 bp and showed complete nucleotide identity, indicating a single mitochondrial haplotype among the analyzed colonies. BLAST results revealed high similarity (96.91–98.38%) with reference sequences of H. itama. Genetic distance analysis showed zero divergence among the sampled colonies and low divergence (0.0069–0.0182) relative to other H. itama sequences, while higher divergence was observed with related taxa. Phylogenetic analysis placed all samples within a well-supported H. itama clade. These findings indicate mitochondrial uniformity among the sampled colonies and provide a preliminary genetic baseline for H. itama in Central Lampung. However, broader conclusions on population structure require further studies with larger sample sizes and additional molecular markers.

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Journal Info

Abbrev

BIOMEDICH

Publisher

Subject

Biochemistry, Genetics & Molecular Biology Medicine & Pharmacology Public Health

Description

BIOLOGY, MEDICINE, & NATURAL PRODUCT CHEMISTRY, this journal is published to attract and disseminate innovative and expert findings in the fields of plant, animal, and microorganism secondary metabolite, and also the effect of natural product on biological system as a reference source for ...