Biodiversitas Journal of Biological Diversity
Vol. 24 No. 8 (2023)

Phylogeny of Davallia (Davalliaceae) from Sumatra and Mentawai Islands, Indonesia: evidence from trnL-F Intergenic Spacer

MILDAWATI MILDAWATI (Plant Biology Graduate Program, Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Meranti, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)
SOBIR SOBIR (Department of Agronomy and Horticulture, Faculty of Agriculture, Institut Pertanian Bogor. Jl. Meranti, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)
SULISTIJORINI SULISTIJORINI (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Agatis, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)
TATIK CHIKMAWATI (Department of Biology, Faculty of Mathematics and Natural Sciences, Institut Pertanian Bogor. Jl. Agatis, Kampus IPB Dramaga, Bogor 16680, West Java, Indonesia)



Article Info

Publish Date
11 Sep 2023

Abstract

Abstract. Mildawati, Sobir, Sulistijorini, Chikmawati T. 2023. Phylogeny of Davallia (Davalliaceae) from Sumatra and Mentawai Islands, Indonesia: evidence from trnL-F Intergenic Spacer. Biodiversitas 24: 4589-4596. Davallia is a member of the family Davalliaceae, which has a wide distribution in the Malesia region. The classification of this genus based on morphological and molecular data shows differences that cause the relationship among species to be debated until now. This study aimed to examine the phylogeny of Davallia from Sumatra and Mentawai Islands, Indonesia based on trnL-F intergenic spacer (IGS) sequence data. A total of 26 accessions representing 10 Davallia species were selected as ingroup and Oleandra articulata (Sw.) C.Presl as an outgroup was downloaded from Gen-Bank (accession number KF667613.1). Data analysis using the Maximum Parsimony (MP) method confirmed Davallia into 2 clades with divided into 7 subclades. Results showed that trnL-F IGS sequence as a non-coding gene explains the grouping species in Davallia. trnL-F IGS sequence can estimate species identity caused by changes in nucleotide bases from mutation. The MP analysis showed each species was resolved as monophyletic. Based on the phylogenetic tree, the longest branching was found in D. corniculata, suggesting that this species is the most primitive in the genus of Davallia in this region. Thus, the trnL-F marker effectively showed the relationship among species in Davallia in Sumatra and Mentawai Islands.

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Journal Info

Abbrev

biodiv

Publisher

Subject

Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology

Description

The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was ...