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Indonesian Journal of Chemistry

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Published by Universitas Gadjah Mada

ISSN : 14119420 EISSN : 24601578 DOI : -

Core Subject : Science, Engineering,

Chemical Engineering, Chemistry & Bioengineering Chemistry

Indonesian Journal of Chemistry is an International, peer-reviewed, open access journal that publishes original research articles, review articles, as well as short communication in all areas of chemistry including applied chemistry. The journal is accredited by The Ministry of Research, Technology and Higher Education (RISTEKDIKTI) No : 21/E/KPT/2018 (in First Rank) and indexed in Scopus since 2012. Since 2018 (Volume 18), Indonesian Journal of Chemistry publish four issues (numbers) annually (February, May, August and November).

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Articles 30 Documents

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Search results for , issue "Vol 19, No 2 (2019)" : 30 Documents clear

Development of a Graphical User Interface Application to Identify Marginal and Potent Ligands for Estrogen Receptor Alpha Nunung Yuniarti; Sudi Mungkasi; Sri Hartati Yuliani; Enade Perdana Istyastono
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

Employing ensemble Protein-Ligand Interaction Fingerprints (ensPLIF) as descriptors in post retrospective Structure-Based Virtual Screening (SBVS) campaigns Quantitative Structure-Activity Relationship (QSAR) analysis has been proven to significantly increase the predictive ability in the identification of potent ligands for estrogen receptor alpha (ERα). In the research presented in this article, similar approaches have been performed to construct and retrospectively validate an SBVS protocol to identify marginal ligands for ERα. Based on both validated SBVS protocols, a graphical-user-interface (GUI) application to identify if a compound is a non-, moderate or potent ligand for ERα was developed. The GUI application was subsequently used to virtually screen genistin, genistein, daidzin, and daidzein, followed by in vitro test employing a cytotoxic assay using 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide (MTT) method.

Comparison of Au(III) Sorption on Amine-Modified Silica (AMS) and Quaternary Amine-Modified Silica (QAMS): A Thermodynamic and Kinetics Study Ngatijo Ngatijo; Rahmat Basuki; Nuryono Nuryono; Bambang Rusdiarso
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

Amine-Modified Silica (AMS) and Quaternary Amine-Modified Silica (QAMS) has been synthesized through the sol-gel process for adsorption Au(III) in aqueous solution. The aim of this work was to compare the effect of addition three methyl group of AMS to form QAMS on its character, thermodynamics and kinetics parameter of sorption of Au(III) in aqueous solution. Characterizations performed by FT-IR, XRD, SEM and BET analyzer. Sorption study was carried out in a batch system under the various experimental conditions including the effect of medium acidity, a variation of Au(III) concentration (thermodynamics study), and variation of contact time (kinetics study). Optimum pH of sorption Au(III) on AMS was 3 and shift into 5 on QAMS. Thermodynamics sorption study by Langmuir isotherm models indicates that there was an increase of sorption capacity from 37.94 mg/g (AMS) to 74.47 mg/g (QAMS). Kinetics sorption studies by Lagergren, Ho, and RBS models indicate that the sorption Au(III) in this research fitted well with the RBS models. The addition of 3 methyl group also increased the sorption rate of Au(III) on QAMS (ka = 77.29 min-1 (mole/L)-1) over AMS (ka = 69.22 min-1 (mole/L)-1) and reinforce the electrostatic interaction between active site of QAMS.

Separation of Pb(II) Ion with Tetraacetic Acid Derivative of Calix[4]arene by Using Droplet-based Microreactor System Yehezkiel Steven Kurniawan; Mizuki Ryu; Ramachandra Rao Sathuluri; Wataru Iwasaki; Shintaro Morisada; Hidetaka Kawakita; Keisuke Ohto; Masatoshi Maeki; Masaya Miyazaki; Jumina Jumina
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

In this study, the microreactor system was investigated and compared with the batch-wise system as rapid and effective extractive Pb(II) separation over Fe(III), Cu(II) and Zn(II) with tetraacetic acid calix[4]arene. By using a microreactor system, the Pb(II) extraction percentages reached the maximum of 73, 89 and 100% in 8 sec residence time at equilibrium pH of 2.00, 2.25 and 2.50, respectively. The stripping percentage was 92% at 8 sec residence time by using a microreactor system with 2.0 M HNO3 as a stripping reagent. Complete separation of Pb(II) over Fe(III), Cu(II) and Zn(II) ions with the tetraacetic acid calix[4]arene in a competitive metal system was achieved at pH 2.00. However, the batch system required 24 h to reach the equilibrium for both extraction and stripping processes. The results suggested that the microreactor system enhanced the Pb(II) extraction and stripping rate up to 104 times faster than the batch-wise system.

Synthesis of Gold Nanoparticles Capped-Benzoic Acid Derivative Compounds (o-, m-, and p-Hydroxybenzoic Acid) Agustina Sus Andreani; Eko Sri Kunarti; Sri Juari Santosa
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

The effect of a hydroxyl functional group of the benzoic acid derivative compound, i.e. o-hydroxybenzoic acid, m-hydroxybenzoic acid, and p-hydroxybenzoic acid on the synthesis of AuNPs has been studied. It was revealed that the pH, heating time, the concentration of capping agent and the concentration of Au3+ affected the formation of AuNPs. We discovered that o-hydroxybenzoic acid possessed the highest stability, yet it needed the highest concentration of Au3+ and faster reaction time than p-hydroxybenzoic acid and slower than m-hydroxybenzoic acid. The stability was verified by means of UV-Vis spectrophotometer, XRD, TEM, Particle Size Analyzer (PSA), and Zeta Potential with an aging time of more than 5 months. We concluded that o-hydroxybenzoic acid acquired the most effective redox reaction instead of m-hydroxybenzoic acid and p-hydroxybenzoic acid, resulted in the smaller sized and unaggregated AuNPs. We also confirmed that the hydroxyl group of o-hydroxybenzoic acid, m-hydroxybenzoic acid and p-hydroxybenzoic acid is the functional group responsible for the reduction of Au3+ to Au0.

Immobilization of Sulfur from Different Precursors on Mini Rice-Husk-Ash Pellet Coated Chitosan Film and the Application for Mercury Vapor Uptake Muhammad Adlim; Fitri Zarlaida; Ibnu Khaldun; Rizka Dewi; Sofyatuddin Karina; Ahmad Fairuz Omar
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

Stabilizing elemental mercury using elemental sulfur has been a laboratory standard method but the studies in gas system are still growing. This study aims to explore the effect of different type immobilized sulfurs toward the mercury vapor uptake in a mini gas reactor. Sulfur powder, sulfur dissolved in carbon disulfide and colloidal sulfur from sodium thiosulfate-hydrochloric acid were immobilized on mini rice-husk-ash pellets that were previously coated with chitosan film. The average thinness of chitosan film was 58 µm covered the each pellet surface with dimension of 3 mm Ø x 4 mm. The trends of the mercury uptake and the rate of absorption were described as follow; Pellet-Scolloid > Pellet-SCS2 > Pellet-Spowder. The mean percentages of mercury uptake after 1 h running at 70oC were 99.36; 89.09 and 75.00 respectively. The reverse trends were observed for the size of S-particle aggregation and the amount of S found on the pellet surface.

Molecular Docking, Dynamics Simulation, and Scanning Electron Microscopy (SEM) Examination of Clinically Isolated Mycobacterium tuberculosis by Ursolic Acid: A Pentacyclic Triterpenes Dian Ayu Eka Pitaloka; Sophi Damayanti; Aluicia Anita Artarini; Elin Yulinah Sukandar
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

The purpose of this study was to analyze the inhibitory action of ursolic acid (UA) as an antitubercular agent by computational docking studies and molecular dynamics simulations. The effect of UA on the cell wall of Mycobacterium tuberculosis (MTB) was evaluated by using Scanning Electron Microscopy (SEM). UA was used as a ligand for molecular interaction and investigate its binding activities to a group of proteins involved in the growth of MTB and the biosynthesis of the cell wall. Computational docking analysis was performed by using autodock 4.2.6 based on scoring functions. UA binding was confirmed by 30 ns molecular dynamics simulation using gromacs 5.1.1. H37Rv sensitive strain and isoniazid-resistant strain were used in the SEM study. UA showed to have the optimum binding affinity to inhA (Two-trans-enoyl-ACP reductase enzyme involved in elongation of fatty acid) with the binding energy of -9.2 kcal/mol. The dynamic simulation showed that the UA-inhA complex relatively stable and found to establish hydrogen bond with Thr196 and Ile194. SEM analysis confirms that UA treatment in both sensitive strain and resistant strain affected the morphology cell wall of MTB. This result indicated that UA could be one of the potential ligands for the development of new antituberculosis drugs.

Coating of 2-Aminobenzimidiazole and 1-(o-Tolyl)biguanide Functionalized Silicas on Iron Sand Magnetic Material for Sorption of [AuCl4]– Nuryono Nuryono; Nur Mutia Rosiati; Abraham L Rettob; Suyanta Suyanta; Yateman Arryanto
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

Two novel materials of 2-aminobenzimidiazole (AB) and 1-(o-tolyl)biguanide (TB) modified silicas coated on the iron sand magnetic material (MM@SiO2/AB and MM@SiO2/TB) have been synthesized and were used to adsorb Au(III) from Au/Cu/Ni solution. Silica layering MM was modified with polyamino compounds via a sol-gel process using a sodium silicate solution, 3-chloropropyltrimethoxysilane (CPTS) and modifier compounds. Adsorption of Au(III) on MM@SiO2/AB and MM@SiO2/TB was investigated in a batch system by varying pH, initial concentration, contact time and the presence of other metal ions (Cu(II) and Ni(II)). The results showed that MM@SiO2/AB and MM@SiO2/TB were successfully synthesized through the sol-gel process using cross-linking agent CPTS. Adsorption of Au(III) on MM@SiO2/AB and MM@SiO2/TB decreased with the increase of pH and followed the Langmuir isotherm models with adsorption capacity of 17.15 and 9.44 mg/g, respectively. The adsorption kinetics fit to pseudo-second-order model with the rate constants of 1.16 × 10-2 and 1.46 × 10-2 g mg-1 min-1, respectively. MM@SiO2/AB and MM@SiO2/TB gave a high selectivity towards Au(III) in a mixture of Cu(II) and Ni(II). The desorption using thiourea 1 M solution in 1 M HCl of metal ions showed that percentage of Au(III) desorbed was higher than that of Cu(II) and Ni(II).

Optimization of Production Process of Nano-Calcium Oxide from Pinctada maxima Shell by Using Taguchi Method Kendri Wahyuningsih; Jumeri Jumeri; Wagiman Wagiman
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

West Nusa Tenggara is a center of sea oyster farming for Pinctada maxima in Indonesia. The calcium carbonate (CaCO3) compounds in the shell are one of the decomposed natural minerals to produce calcium oxide (CaO) compound which is able to be used as an alternative heterogeneous catalyst in nanometer scale. This research aims to discover the control factors which influence the production process of nanometer-scaled CaO heterogeneous catalyst and choose the best condition in its production process with a better-quality product. Calcined pearl shell (P. maxima) powder is milled by using Shaker mill. The experimental design is performed by using Taguchi method with an orthogonal matrix consisting of 4 control factor variables, i.e. milling time, ball-to-powder weight ratio, the diameter of milling beads and extent of milling the vial. The selection of best control factor variable combination is computed by using multiresponse loss function. ANOVA analysis shows that the product quality parameter of nano-calcium oxide is influenced by all experiment factors. Multi-response loss function analysis results an optimum factor and level combination under process condition happens during the duration of 3 h milling, the ball-to-powder weight ratio is 1:10, the diameter of milling beads is 5 mm and 55% extent of filling the vial.

Simulation of Melt Viscosity Effect on the Rate of Solidification in Polymer Jaka Fajar Fatriansyah; Hanindito Haidar Satrio; Muhammad Joshua Yuriansyah Barmaki; Arbi Irsyad Fikri; Mochamad Chalid
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

Phase field model has been successfully derived from ordinary metal phase field equation to simulate the behavior of semi-crystalline polymer solidification phenomenon. To obtain the polymer phase field model, a non-conserved phase field equation can be expanded to include the unique polymer parameters, which do not exist in metals, for example, polymer melt viscosity and diffusion coefficient. In order to expand this model, we include free energy density and non-local free energy density based on Harrowel-Oxtoby and Ginzburg-Landau theorem for polymers. The expansion principle for a higher order of binary phase field parameter was employed to obtain fully modified phase field equation. To optimize the final properties of the products, the solidification phenomenon in polymers is very important. Here, we use our modified equation to investigate the effect of melt viscosity on the rate of solidification by employing ordinary differential equation numerical methods. It was found that the rate of solidification is related to the melting temperature and the kinetic coefficient.

Response Surface Method Application in Tofu Production Liquid Waste Treatment Hefni Effendi; Romi Seroja; Sigid Hariyadi
Indonesian Journal of Chemistry Vol 19, No 2 (2019)
Publisher : Universitas Gadjah Mada

Liquid waste of tofu production has a high content of organic matter which can lead to a decrease in water quality. This study was aimed to obtain an optimal combination of duration and waste concentration in tofu liquid waste treatment using Chrysopogon zizanioides. Response surface method using Design Expert 7.0 software was applied to optimize combination response of duration (3, 9, 15 days) and waste concentration (20, 40, 60%), aided by Design Expert 7.0 software. The optimum treatment was 15 days with 20% waste concentration, reducing 55.48% of COD, 37.86% BOD, 93.51% TSS, 87.86% Turbidity, increasing DO to 7.2 mg/L and pH to 7.2.

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