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Marine Research in Indonesia

MRI
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Published by Lembaga Ilmu Pengetahuan Indonesia

ISSN : 02162873 EISSN : 24432008 DOI : -

Core Subject : Science,

Earth & Planetary Sciences

MARINE RESEARCH IN INDONESIA (MRI) has been published since 1956 by Indonesia's oldest marine research institute, the Research Center for Oceanography of LIPI (Indonesian Institute of Sciences). MRI focuses on physical, chemical, biological, geological oceanographic as well as coastal management studies in the Indonesian seas and the adjacent Indo-Pacific region.

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Articles 567 Documents

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SPATIAL VARIATION IN POPULATION CHARACTERISTICS OF VENUS CLAM GAFRARIUM TUMIDUM RÖDING, 1798 (BIVALVIA: VENERIDAE) IN AMBON BAY, MALUKU Islami, Muhammad Masrur; Bengen, Dietriech Geoffrey; Dody, Safar
Marine Research in Indonesia Vol 43 No 2 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

Ambon Bay consists of two regions i.e. Inner and Outer Ambon Bay that was separated by Galala-Poka sill. Consequently these waters have different local environmental conditions that leads to the bivalve populations differences, one of them is venus clam Gafrarium tumidum. In this study, the distribution and spatial variation in population characteristics of of venus clam was quantified based on the analysis of their twelve shell dimensions from different populations. Fieldwork and analyses were conducted on April – Juni 2013. Total of 585 individuals of venus clam were found and could be divided into ten size-classes and three size categories i.e. small (< 23.11 mm), medium (23.12–32.05 mm) and large size (> 32.06 mm). The highest size-class density was found at medium size. Spatial distribution was related to the characteristics of sediment and other potential factors. Result of discriminant analysis showed that shell-width (SW) was the variable with the highest discriminating power and distinguishing between Inner and Outer Ambon Bay populations.

ISOLATE OF HETEROTROPHIC MICROALGAE AS A POTENTIAL SOURCE FOR DOCOHEXAENOIC ACID (DHA) Julianti, Elin; Fathurohman, Mochamad; Damayanti, Sophi; Kartasasmita, Rahmana Emran
Marine Research in Indonesia Vol 43 No 2 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

Docosahexaenoic acid (DHA) is one of essential fatty acids that are beneficial to health. Nowadays, the source of docosahexaenoic acid (DHA) is mainly obtained from fish which are extracted into fish oil products. However, the fish oil products still have some drawbacks in term of purity, acceptable flavor for costumers, and also their not environmental friendly production process. As an alternative solution, heterotrophic microalgae can be used as a potential source for DHA due to their excellence compared to fish oil products. The aim of this study is to isolate the heterotropic microalgae that can produce DHA. The heterotrophic microalgae were isolated from mangrove fallen leaves (Rhizophora apiculata) by using direct planting method. The morphology of pure microalgae colony were observed through light microscope and subsequently fermented for 14 days. Fatty acids were extracted and methylated through direct transesterification method. Identification and quantification of DHA were conducted by using gas chromatography. The results were four isolates of heterotropic microalgae, namely MTKC1, MTKC2, MTKC3, and MTKC4. The extract of MTKC2 that only showed the content of DHA with value of 9.2 % w/w. Therefore MTKC2 is a potential source for DHA. The MTKC2 was further identified by using molecular biology method and confirmed as Thraustochytrium aureum.

REPRODUCTION AND LARVAL REARING OF SANDFISH (Holothuria scabra) Sembiring, Sari Budi Moria; Wibawa, Gigih Setia; Giri, I Nyoman Adiasmara; Hutapea, Jhon Harianto; Haryanti, -
Marine Research in Indonesia Vol 43 No 1 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

The natural stock of sea cucumber Holothuria scabra (known as sandfish) has been declining in both population and size, making it difficult to collect broodstock and juvenile sandfishes for aquaculture. This research aims to evaluate the reproduction of domesticated broodstock (F-1) and performance of the juveniles (F-2). Broodstock were reared in two rectangular concrete tanks with a dimension of 190 x 290 x 70 cm3. There were 12 individuals (7 males and 5 females) of broodstock (F-1) with total length and mean body weight of 12.0 ± 1.21 cm and 122.6 ± 32.37 g, respectively. Six broodstock were put in each tank and fed with compressed benthos at 4% biomass daily in the afternoon. During our experiment, domesticated sandfish broodstock successfully spawned twice. The first spawning (occurred in January 2017) had one female spawned that released 1,350,000 eggs with a hatching rate of 57.4%. Another broodstock spawned in April 2017 and produced 3,280,000 eggs with a hatching rate of 78.66%. The growth performance of 170 days-old juveniles (F-2) shows a total length of 5.66 ± 0.90 cm and a mean body weight of 10.08 ± 2.07 g. The survival rates are 5.19% and 8.68% for juveniles spawned in January and April, respectively. We conclude by showing that sandfish could be domesticated to produce seeds for further aquaculture development.

SEAGRASS POPULATION CONNECTIVITY IN THE SOUTH CHINA SEA Hernawan, Udhi Eko
Marine Research in Indonesia Vol 43 No 2 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

Seagrass plays important ecological roles and ecosystem services, yet degrading alarmingly in the South China Sea (SCS), one of the largest marginal seas of the Western Pacific. As connectivity is a vital component in population persistence, understanding of connectivity is of importance for effective seagrass conservation management. In the South China Sea, our understanding of connectivity is mainly based on studies in fishes and invertebrates. Connectivity in seagrass populations, on the other hand, is still poorly investigated. In this review, I predict that genetically structured population of seagrass is likely to occur in the SCS. Future research on seagrass connectivity should include (i) investigation on the pattern of connectivity at a local and broader-regional scale, and (ii) investigation on processes involved in the seagrass connectivity. These investigations are aimed to improve our knowledge of seagrass connectivity and to contribute in providing a solid framework for seagrass restoration/transplantation and spatial planning of seagrass management.

THE FIRST RECORD OF Holothuria (Semperothuria) Roseomaculata KERR, 2013 (Echinodermata: Holothuroidea) IN INDONESIA Setyastuti, Ana
Marine Research in Indonesia Vol 43 No 1 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

This paper documents the first record of Holothuria (Semperothuria) roseomaculata Kerr, 2013 (Echinodermata: Holothuroidea) from Indonesia. A freshly salted specimen was collected from fishers in Sumbawa, West Nusa Tenggara, Indonesia. This species was previously recorded from Yap and Chuuk States in the Federated States of Micronesia, Papua New Guinea, Palau, Okinawa-Japan, Sabah, Borneo-Malaysia, Solomon Islands, Vanuatu and New Caledonia. Reference material has been deposited in the Reference Collection of the Research Center for Oceanography, Indonesian Institute of Sciences in Jakarta, Indonesia.

PARTICLE SIZE CHARACTERISTICS OF RIVERBED SEDIMENTS TRANSPORTED BY TIDAL BORE ‘BONO’ IN KAMPAR ESTUARY, RIAU-INDONESIA Gemilang, Wisnu Arya; Wisha, Ulung Jantama; Rahmawan, Guntur Adhi
Marine Research in Indonesia Vol 43 No 1 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

The presence of tidal bore in the Kampar River (locally known as ‘bono’) may influence sedimentation in the Kampar River and its estuary. Understanding sedimentation mechanisms (e.g., erosion, deposition) is important to communities along the Kampar River, which can be studied by analyzing characteristics of grain size distribution. Here, we study riverbed sediment samples collected from 17 stations using an Ekman grab sampler, accompanied by bathymetry and acoustic Doppler current profiler (ADCP) measurements. Grain size data show that the sediments are coarser upstream and gradually finer downstream. Silty sands are predominant in the upstream section of the river, sands in its river body and sandy silts in the downstream. The results indicate the influence of undular bores on grain size characteristics. We also found that the propagation of bono and Kampar River’s funnelshaped morphology cause intense scouring events of riverbed sediments. Sortation values that range between 0.332.14 suggest unstable currents that result in randomly deposited sediments. The sediment mass transfer per area is positively towards downstream at the low tidal condition. However, after the passage of the bores, the sediment mass transfer area becomes negatively towards upstream.

POLLUTION OF COASTAL AREAS OF JAKARTA BAY: WATER QUALITY AND BIOLOGICAL RESPONSES Kunzmann, Andreas; Arifin, Zainal; Baum, Gunilla
Marine Research in Indonesia Vol 43 No 1 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

Coastal development, growing urbanization and industrialization are the most important stressors of coral reefs worldwide. Jakarta is one of the largest megacities worldwide. The coral reefs of the Thousand Islands north of Jakarta have degraded dramatically over the last 30-40 years. While large-scale gradients (i.e., regional drivers) have been extensively studied and shown shifts and declines in coral cover and composition, local drivers and their impact on spatial community composition have been neglected. The aim of our study is to investigate the spatial impact of anthropogenic stressors on local and regional scales on coral reefs north of Jakarta. Our results demonstrate that reefs in the north of the Thousand Islands are separated from the reefs in Jakarta Bay (JB), where a direct impact of Jakarta can be seen. Local anthropogenic effects rather than regional gradients have shaped a spatial patchwork of differentially degraded reefs along the nearshore islands. The main anthropogenic stressor is pollution and sedimentation rate, NO2, PO4 and chlorophyll-a explain over 80% of the variation. Surfactants and diesel-borne compounds from sewage and bilge water discharges are common pollutants. Responses to combinations of selected pollutant with elevated temperature (+3°C) were determined in the metabolic performance of the coral reef fish Siganus guttatus. During combined exposure, metabolic depression was observed. Effects of pollutants were not amplified by elevated temperature. In a study about two dominant soft coral genera, Sarcophyton spp. and Nephthea spp., on dissolved inorganic nutrients (DIN), turbidity (NTU), and sedimentation combined with measurements of photosynthetic yield and respiratory electron system (ETS) activity water quality seems to control the relative abundance and physiology of dominant soft corals in JB. In order to reverse or prevent phase shifts from hard to soft corals, there is a need to manage the water quality better. It is concluded that the intense anthropogenic pressure from local as well as regional sources is responsible for the spatial structure and health of reefs. Therefore, improved spatial management with a focus on both local and regional stressors is needed for effective marine conservation.

MANGROVE BRACHYURAN CRABS IN WORI, NORTH SULAWESI, INDONESIA Pratiwi, Rianta; Widyastuti, Ernawati
Marine Research in Indonesia Vol 43 No 2 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

The study for faunal diversity from mangrove sites in Wori were very less work carried out, especially on brachyuran crab taxa. Healthy mangrove forests provide  a critical for many species of Crabs in intertidal and estuarine areas are keys to healthy marine ecology. Mangroves are the most suitable feeding, breeding and nursery grounds for crabs and other crustaceans. In this study, the habitat distribution and diversity of crabs in Wori mangrove environment was recorded from  October 2015 and August 2016. In view of the significance of the mangrove habitat, in present study we selected three station with different habitat specifications as in  Wori Seaward (WSW), Wori Middle zone (WMZ) and Wori Landward (WLW). Total 15 species and 307 individuals of brachyuran crabs were recorded belonging to 10 genera and 6 families. Crabs belonging to family Sesarmidae was most dominant with 7 species. The other major outcome of study was maximum diversity was found at Wori Landward (WLW) site with 13 species, followed by Middle Zone (WMZ) site with 11 species and Wori Seaward (WSW) site with 10 species.  

CHEMICAL COMPOSITIONS OF TWO BROWN SEAWEED SPECIES FROM KARIMUN JAWA, INDONESIA Siahaan, Evi Amelia; Asaduzzaman, A.K.M.; Pangestuti, Ratih
Marine Research in Indonesia Vol 43 No 2 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

Seaweeds are potentials to be developed as alternative source in foods and pharmaceuticals. In this study, chemical compositions of two brown seaweeds species from Karimun Java Indonesia Padina australis and Turbinaria conoides were investigated. Proximate results showed that both seaweeds contain high amount of carbohydrates and ashes. Mineral contents of P. australis and T. conoides follow the orders of Na>Mg>Fe>K>Ca>Zn>Cu and Na>Mg>K>Fe>Zn>Ca>Cu, respectively. Almost all essential amino acids (including histidine, isoleucine, leucine, phenylalanine, threonine, valine and lysine) were present in both seaweeds. Amino acid profiles showed that both seaweed contain polyunsaturated fatty acids (PUFA) with T. conoides contain higher amount of EPA (8.58 ± 0.22 g/100 g of total fatty acids) and DHA (6.05 ± 0.21 g/100 g of total fatty acids). The findings of this study have provided evidence that brown seaweeds were nutritious and potential to be utilized for producing functional ingredients in food. Further, P. australis and T. conoides can be used as candidate to be used in food industries to increase shelf-life of food items for human consumption, and use to deter deleterious free radical-induced life-threatening diseases.

PRACTICAL GUIDELINES FOR ASSESSING CORAL CALCIFICATION VIA COMPUTED TOMOGRAPHY Nurhati, Intan Suci
Marine Research in Indonesia Vol 43 No 2 (2018)
Publisher : Research Center for Oceanography - Indonesian Institute of Sciences (LIPI)

Coral calcification as the product of extension rate and skeletal density, is projected to change under marine environmental changes of local (e.g., sedimentation, eutrophication) and global (e.g., warming, ocean acidification) scales. For the regional effort to monitor the ecological impacts of ocean acidification on coral reef ecosystems, the Intergovernmental Oceanographic Commission Sub-Commission for the Western Pacific (IOC-WESTPAC) has incorporated an interdisciplinary approach that includes monitoring of seawater carbonate parameters, coral calcification, net calcification minus bioerosion, and reef community structure. Currently, there is a need to formulate a standard operating procedure (SOP) for assessing coral calcification over the recent years via coral cores. The SOP needs to yield accurate data in a cost-effective way that can be applied by researchers in the region. High variation of coral calcification parameters between coral colonies warrants a sufficiently large number of samples thus a rapid method for analyzing coral extension rate, skeletal density, and calcification. This paper outlines practical guidelines for assessing coral calcification from the field to laboratory using the three-dimensional computed tomography (CT) method.

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Aan J. Wahyudi

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Kota adm. jakarta selatan,

Dki jakarta

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