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Microbiology Indonesia
Published by Perhimpunan Mikrobiologi Indonesia
ISSN : 19783477     EISSN : 20878575     DOI : -
Core Subject : Health, Science,
Biochemistry, Genetics & Molecular Biology Immunology & microbiology Medicine & Pharmacology
Microbiology Indonesia provides a unique venue for publishing original researches in microbiology (espesially from Indonesian reseachers), and ensures that authors could reach the widest possible audience. Microbiology Indonesia publishes a wide range of research disciplines on bacteria, archaea, fungi, protozoa, and virus as well as biotechnology related to microbiology. Topics include (but are not limited to): -methods in microbiology, -bioprocess, -environmental microbiology, -food microbiology, -plant-microbe interaction, -animal-microbe interactions, -microbial community, -microbial genetics, -virology, -comparative and functional microbial genomics, -and gene expression in microbes.
Arjuna Subject : Imunologi dan Mikrobiologi (semua kategori) - Mikrobiologi dan Bioteknologi Terapan
Articles 5 Documents
 1 
Search results for , issue "Vol. 15 No. 3 (2021): September 2021" : 5 Documents clear
Domestication and Formulation of Rhizopodopsis Javensis as Tempeh Starter GAYUH RAHAYU; EFRIWATI EFRIWATI; SEPTINA VERONICA
Microbiology Indonesia Vol. 15 No. 3 (2021): September 2021
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (886.36 KB) | DOI: 10.5454/mi.15.3.1

Abstract

ABSTRACT Domestication of wild fungal strains involved in the manufacture of traditional fermented foods often occurs spontaneously. Rhizopodopsis javensis (Rh. javensis) is taxonomically close to Rhizopus. The wild strain Rhizopodopsis javensis has found in cool climates can be developed as a starter in tempeh production in temperate regions. Before formulating it as a tempeh starter, a wild strain of Rh. javensis needs to be domesticated in human-made niches. A wild strain of Rh. javensis was domesticated by subculture using rice flour media at optimum growth temperature and carried out every five days. The spore's density and viability and the starter's water content were used to determine its quality. The results showed that Rh. javensis grew optimally at 22 ℃. With seven-time subcultures using rice flour media, the domestication process did not change the Rh. javensis growth rate and colony appearance. The growth rate of Rh. javensis is relatively the same as that of commercial tempeh starter and pure R. microsporus var. oligosporus, at each optimal growth temperature. In the rice flour media as a carrier, Rh. javensis produces spore's density that is relatively the same as that of commercial tempeh starter but with lower spore's viability and higher water content. Therefore, Rh. javensis cannot be used as a starter to produce tempeh in the temperate region. The carrier material and drying processes still need to be modified to increase spore viability and improve the overall quality, including the starter's lifespan. Keywords: food fermentation, Rhizopus microsporus var. oligosporus, spore's viability, starter quality, wild strain ABSTRAK Domestikasi galur liar kapang yang terlibat dalam dalam pembuatan makanan fermentasi tradisional, sering terjadi secara spontan. Rhizopodopsis javensis (Rh. javensis) merupakan salah satu galur liar kapang yang memiliki hubungan taksonomi dekat dengan Rhizopus. Strain liar ini ditemukan di daerah beriklim sejuk, sehingga berpotensi untuk dikembangkan sebagai starter tempe untuk produksi di daerah beriklim sedang. Untuk mendapatkan kultur yang tumbuh subur di relung (niches) buatan manusia, strain liar Rh. javensis perlu didomestikasi terlebih dahulu. Penelitian ini bertujuan untuk mendomestikasi strain Rh. javensis liar yang dilanjutkan dengan memformulasikannya sebagai starter tempe. Domestikasi dilakukan dengan menumbuhkan strain liar Rh. javensis pada media tepung beras pada suhu pertumbuhan optimum dan diulangi setiap lima hari. Kerapatan dan viabilitas spora, serta kadar air starter digunakan sebagai penilaian keberhasilan starter. Hasil penelitian menemukan Rh. javensis tumbuh optimal pada suhu 22 ℃. Domestikasi dengan cara subkultur koloni Rh. javensis pada media tepung beras selama 7 kali tidak mengubah kecepatan pertumbuhan Rh. javensis dan penampakan koloni. Laju pertumbuhan Rh. javensis relatif sama dengan laju pertumbuhan starter tempe komersial dan R. microsporus var. oligosporus murni, pada suhu optimum pertumbuhan masing-masing. Formulasi tepung beras sebagai media pembawa starter Rh. javensis, menghasilkan kerapatan spora yang relatif sama dengan starter tempe komersial, namun viabilitas sporanya rendah dan kadar airnya tinggi. Starter Rh. javensis belum dapat digunakan untuk membuat tempe. Substrat dan proses pengeringan masih perlu dimodifikasi untuk meningkatkan viabilitas spora dan kualitas starter tempe secara keseluruhan, termasuk umur simpan starter. Keywords: fermentasi makanan, kualitas starter, Rhizopus microsporus var. oligosporus, strain liar, viabilitas spora
Production and Characterization of Thermoalkaliphilic Xylanase from Bacillus halodurans CM1 on Degumming Process of Ramie (Boehmeria nivea L.Gaud)Fiber as Textile Raw Material DEWI NANDYAWATI; DEA INDRIANI ASTUTI; NIKNIK NURHAYATI; ASEP RISWOKO; IS HELIANTI
Microbiology Indonesia Vol. 15 No. 3 (2021): September 2021
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (972.873 KB) | DOI: 10.5454/mi.15.3.3

Abstract

Ramie fiber is a potential raw material to substitute imported raw materials such as cotton. Due to its higher hemicellulose content, ramie fiber required hydrolysis in a process called degumming. Enzymatic degumming is environmentally friendly compared to traditional process which using chemicals. Alkalithermophilic xylanase have high ability in hemicellulose hydrolysis. The production of xylanase was conducted by submerged fermentation of Bacillus halodurans CM1 in 20L bioreactor using Mamo and corncob medium with optimum conditions at 50°C, pH 9, 150 RPM and 1 vvm. The optimum specific activity of xylanase measured by Bailey method at 70°C and pH 9 is 475.41 U/mg. Xylanase was stable at 50°C, pH 9 and relatively stable to K+, Na2+, Co2+ and Ca2+ metal ions and Triton-X, Saba dan Tween-80 surfactants. Degumming process was carried out by immersing ramie fibers in formulated degumming solution with vlot 1:20 at 50°C, 150 RPM and 180 minutes. The enzymatic degumming process may substitute or reduce the use of chemicals due to its significant effect on ramie fiber quality. Enzymatic and chemical degumming process reduce the weight of Ramie Fiber to 7.23 %, and 7.72 %, slightly higher than enzymatic degumming 7.15%. Enzymatic degumming maintains tensile strength at 27.51 %. Whiteness index enhanced to 2.99% enzymatically and 3.49% chemically. Keywords: Bacillus halodurans CM1, enzymatic degumming, ramie fiber, textile industry, thermoalkaliphilic xylanase
Analysis of The Phytochemical Characteristics of Jasmine Flower Against Escherichia coli and Staphylococcus aureus NATHASA WEISDANIA SIHITE; HERLA RUSMARILIN; MANUNTUN ROTUA
Microbiology Indonesia Vol. 15 No. 3 (2021): September 2021
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (684.053 KB) | DOI: 10.5454/mi.15.3.4

Abstract

Indonesia is a famous country had the diversity of plants, especially agricultural product and herbs, they had a potential of antimicrobial as a like Jasmine Flower (Jasminum sambac Ait). This study Indonesia is a famous country had the diversity of plants, especially agricultural product and herbs, they had a potential of antimicrobial as a like Jasmine Flower (Jasminum sambac Ait). This study aimed to determine the phytochemical and antimicrobial activity of jasmine flower. Extraction was done by maceration, such as using water solvent, methanol, ethyl acetate, and hexane as the solvent. The sample bacteria used were Escherichia coli and Staphylococcus aureus. This study used disc diffusion method, with a complete 2-factor random design and 4 replications. Processing of the data is using ANOVA. The results showed that the jasmine extracts with a concentration of 25%, 50%, 75% and 100% had an effect to inhibit of the growth of the bacteria. Jasmine extract with ethyl acetate solvent was the most effective to inhibit the growth of bacteria. It was known that jasmine flower extract is one of the good natural antimicrobials gave an inhibitory effect to the growth of Escherichia coli and Staphylococcus aureus bacteria. Keywords: jasmine, Escherichia coli, Sthaphylococcus aureus, antimicrobials
Are Trichoderma atroviride and Trichoderma harzianum Effective to Control Fusarium Associated With Tomato Wilt? WILFRIDUS ADYATMA PUTRANTO; RULLY ADI NUGROHO; PETRUS SUNU HARDIYANTA; DESTI CHRISTIAN CAHYANINGRUM
Microbiology Indonesia Vol. 15 No. 3 (2021): September 2021
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (667.599 KB) | DOI: 10.5454/mi.15.3.2

Abstract

The pathogenic fungi, such as Fusarium in the rhizosphere of tomato (Solanum lycopersicum) negatively affects the yield and quality of the plant. A number of biological control agents have been used for protecting tomato plants against wilt diseases including various fungal species. The objective of this study was to evaluate the antagonism effects of Trichoderma atroviride and T. harzianum against the pathogen Fusarium sp. associated with tomato wilt. In this study, the antagonism of these Trichoderma spp. against the Fusarium sp. was tested in vitro by the dual culture technique, and the percentage inhibition of radial growth (PIRG) and the antagonism reaction (scale 1-5) were evaluated. The results showed that T. atroviride and T. harzianum led to 70.8% PIRG and scale 1 antagonism reaction, and 40.6% PIRG and scale 3 antagonism reaction against Fusarium sp. associated with tomato wilt after 7 days of incubation, respectively. These results indicate that application of T. atroviride and T. harzianum may be promising approach for biological control of Fusarium wilt of tomato and may play an important role in sustainable agriculture.
Comparison of N-Acetyl-L-Cysteine-Sodium Hydroxide-Based and Modified Petroff's Decontamination Method for Mycobacterium tuberculosis Culture ARIYANI KIRANASARI; MUHAMMAD RAYHAN
Microbiology Indonesia Vol. 15 No. 3 (2021): September 2021
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (505.868 KB) | DOI: 10.5454/mi.15.3.5

Abstract

Indonesia is one of 22 countries with a high incidence of tuberculosis in the world, particularly related to TBHIV and MDR-TB cases. Contamination of normal flora from nasopharyngeal tract is the main problem to isolate Mycobacterium tuberculosis (MTB) from sputum. Therefore, a safe solution to decontaminate sputum without killing MTB bacilli is needed. N-acetyl-L-cysteine-sodium hydroxide (NALC-NaOH)-based method and Petroff's method, which was modified with NaOH (4%) are widely used in laboratories. In the present study, we will evaluate the different of these methods. Of the 110 sputum samples were collected from suspected cases of Pulmonary TB, and the decontamination of sputum by these methods was performed, after acid-fast bacillus (AFB) smear, then the samples were cultured in Lowensteins Jensen slant medium. The positive culture was validated by chromatography test for detecting the antigen of MPT-64 and PNB. Based on the investigation, it has been shown that neither NALC-NaOH (71%) nor modified Petroff's methods (66%) had a significant effect on the positivity rate of AFB smear. However, the contamination on culture was significantly higher in samples treated with NALC-NaOH (21%) compared to Modified Petroff methods (13%) (p< 0.05). In addition, the proportion of positive culture in NALC-NaOH was lower than modified Petroff. In conclusion, our study proved that modified Petroff methods are still more effective on sputum decontamination than NALC-NaOH based on the positivity rate of MTB culture. Though, not significantly different on AFB microscopic examination.

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