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All Journal Jurnal Teknologi Laboratorium AKSIOLOGIYA : Jurnal Pengabdian Kepada Masyarakat Indian Journal of Forensic Medicine & Toxicology
Yulanda Antonius
Faculty of Biotechnology, Universitas Surabaya, Surabaya, Indonesia
Chemistry Public Health Social Sciences Other

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Immunobioinformatics analysis and phylogenetic tree construction of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in Indonesia: spike glycoprotein gene Ansori, Arif Nur Muhammad; Kharisma, Viol Dhea; Antonius, Yulanda; Tacharina, Martia Rani; Rantam, Fedik Abdul
Jurnal Teknologi Laboratorium Vol 9 No 1 (2020): 2020 (1): Special Edition "COVID-19"
Publisher : POLTEKKES KEMENKES YOGYAKARTA

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (986.383 KB) | DOI: 10.29238/teknolabjournal.v9i1.221

Abstract

The outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which causes coronavirus disease 2019 (COVID-19), has spread worldwide and as a result, the World Health Organization (WHO) declared it a pandemic. At present, there are no approved vaccines against SARS-CoV-2. Therefore, the aim of this study was to predict epitope-based vaccines using bioinformatics approaches and phylogenetic tree construction of SARS-CoV-2 against the backdrop of the COVID-19 pandemic. In this study, we employed 27 isolates of SARS-CoV-2 spike glycoprotein genes retrieved from GenBank® (National Center for Biotechnology Information, USA) and the GISAID EpiCoV™ Database (Germany). We analyzed the candidate epitopes using the Immune Epitope Database and Analysis Resource. Furthermore, we performed a protective antigen prediction with VaxiJen 2.0. Data for B-cell epitope prediction, protective antigen prediction, and the underlying phylogenetic tree of SARS-CoV-2 were obtained in this research. Therefore, these data could be used to design an epitope-based vaccine against SARS-CoV-2. However, the advanced study is recommended for confirmation (in vitro and in vivo).
Concept of SARS-CoV-2 Vaccine Design to Fight COVID-19 Pandemic: A Review Insight Viol Dhea Kharisma; Arif Nur Muhammad Ansori; Rasyadan Taufiq Probojati; Dora Dayu Rahma Turista; Yulanda Antonius
Indian Journal of Forensic Medicine & Toxicology Vol. 15 No. 4 (2021): Indian Journal of Forensic Medicine & Toxicology
Publisher : Institute of Medico-legal Publications Pvt Ltd

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.37506/ijfmt.v15i4.17127

Abstract

Cluster of pneumonia infection emerged in Wuhan, China due to severe acute respiratory syndromecoronavirus 2 (SARS-CoV-2). Additionally, more than 190 countries have confirmed 82 million casesof SARS-CoV-2 infection. Currently, there is a SARS-CoV-2 epidemic, and no effective prophylacticmethods are available. A vaccine is considered as an effective method to restrict an epidemic. Severalvaccine designing techniques have been established, which is enabling researchers from various institutesfor developing vaccine towards SARS-CoV-2 infections. In this review, we condense the development ofvaccine research against SARS-CoV-2.
Pelatihan Pertanian Secara Vertikultur di Kampung Mejoyo RT 03 RW 07 Surabaya Wina Dian Savitri; Yulanda Antonius; Michael Anthony Thongiratama; Laurensius Dewa Senapati; Leonardo William
Aksiologiya: Jurnal Pengabdian Kepada Masyarakat Vol 7 No 2 (2023): Mei
Publisher : Universitas Muhammadiyah Surabaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.30651/aks.v7i2.16702

Abstract

Kelompok warga RT 03 RW 07 Mejoyo Surabaya adalah masyarakat yang aktif dan rajin. Kampung ini selalu berprestasi khususnya dalam hal lingkungan hidup dan Usaha Mikro Kecil dan Menengah (UMKM). Program pengabdian masyarakat yang didanai DIKTI ini bertujuan untuk memberdayakan warga kampung dalam hal pertanian sayur organik dengan memanfaatkan lahan sempit yang merupakan sepetak tanah fasilitas umum dari Universitas Surabaya (UBAYA). Selain itu, hasil budidaya sayur diolah sehingga terdapat nilai tambah dan solusi jika panen berlebihan atau hasil panen tidak laku terjual. Agar rintisan usaha ini sukses, warga juga dibekali dengan manajemen keuangan dan pemasaran. Peningkatan kemampuan masyarakat dalam hal pertanian organik vertikultur diukur dengan memberikan pre test dan post test. Hasilnya adalah adanya peningkatan keterampilan warga, yaitu sebesar 16%. Sedangkan keterlibatan mahasiswa Merdeka Belajar Kampus Merdeka (MBKM) di dalam program ini dinilai sangat efektif untuk memperkaya pengalaman mahasiswa dalam mengabdi di masyarakat. Hal ini tertuang dalam nilai keterlibatan masing-masing siswa yaitu antara A dan B.
Co-Authors Arif Nur Muhammad Ansori Fedik Abdul Rantam Kharisma, Viol Dhea Laurensius Dewa Senapati Leonardo William Michael Anthony Thongiratama Rasyadan Taufiq Probojati Tacharina, Martia Rani Turista, Dora Dayu Rahma Viol Dhea Kharisma Wina Dian Savitri, Wina Dian