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BIOTROPIA - The Southeast Asian Journal of Tropical Biology
Published by Southeast Asian Regional Centre for Tropical Biology
ISSN : 02156334     EISSN : 1907770X     DOI : http://dx.doi.org/10.11598/btb
Core Subject : Health, Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Immunology & microbiology Veterinary
BIOTROPIA, The Southeast Asian Journal of Tropical Biology, is a scientific publication of the Southeast Asian Ministers of Education Organization (SEAMEO) – Southeast Asian Regional Center for Tropical Biology (BIOTROP). It publishes articles in the broad areas of tropical ecosystems and environmental impacts, biodiversity conservation and sustainable development and biotechnology.
Arjuna Subject : Ilmu Pertanian dan Biologi (Semua) - Ilmu Pertanian dan Biologi (Lain-Lain)
Articles 4 Documents
 1 
Search results for , issue "No. 15 (2000)" : 4 Documents clear
GENETIC DIVERSITY OF AMPICILLIN-RESISTANT Vibrio ISOLATED FROM VARIOUS STAGES OF TIGER SHRIMP LARVAE DEVELOPMENT WIDANARNI WIDANARNI; ANTONIUS SUWANTO
BIOTROPIA - The Southeast Asian Journal of Tropical Biology No. 15 (2000)
Publisher : SEAMEO BIOTROP

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (219.218 KB) | DOI: 10.11598/btb.2000.0.15.160

Abstract

This research was carried  out to  study  genetic  diversity of ampicillin-resistant Vibrio  from various  stages of tiger  shrimp larvae  (Penaeus Monodon) development from,Tambak Inti Rakyat hatchery, near Labuan, West Java, Indonesia. A total of 25 ampicillin-resistant Vibrio isolates were isolated using thiosulphate  citrate bile-salt  sucrose  agar (TCBS-Agar) and seawater  complete agar (SWC-Agar). Physiological and biochemical characterization showed that the isolates could be grouped into only two species, i.e. V. harveyi from the egg stage; and V. metschnikovii from larvae and post-larval stage (i.e nauplius, zoea, mysis, PLi, PL5, PL,0, and PL,5). These isolates were also present in their respective rearing water  of  each stage  and  some natural feed.  Schizotyping analysis employing restriction endonuclease Noll (5'-GC4GGCCGC) indicated that the isolates could be grouped into  at least  13 different  genotypes.  Therefore,  schizotyping  was  more discriminative than physiological characterization. This study showed that particular groups of Vibrio colonized all stages of shrimp larvae and demonstrated closed phylogenetic relationship. These groups of Vibrio might be  the dominant microbiota which could suppress the development of other Vibrio including the pathogenic Vibrio. Key words : Shrimp/ampicillin-resistant K/fcno/schizotyping
PRESENCE OF hemA-LIKE AND hemT-LlKE GENES IN A JSUMBER OF ANOXYGENIC PHOTOSYNTHETIC BACTERIAL ISOLATES FROM INDONESIA AND SOIL SAMPLES FROM BOGOR AREA AINI, NURUL; SUWANTO, ANTONIUS
BIOTROPIA No. 15 (2000)
Publisher : SEAMEO BIOTROP

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (162.845 KB) | DOI: 10.11598/btb.2000.0.15.158

Abstract

The Rhodobacter sphaeroides hemA and hemT are known to encode a distinct 5-aminolevulinic acid (ALA)-synthase isozyme. This enzyme catalyzes the first and rate limiting step in ALA biosynthesis through the C4 pathway. This study was carried out to detect hemA-\\ke and hemT-\\ke genes in twenty Anoxygenic Photosynthetic Bacterial (APB) isolates from several wetland areas in Indonesia, and four DNA samples that were isolated from four soil samples obtained from Bogor area. Hybridization techniques of Southern and dot blot were used, using hemA and hemT fragment as probes. Southern hybridization analyses indicated the presence of hemA-\\ke gene in five of APB isolates, i.e., MB15, MB16, MB21.2, MB55 and MB6, whereas hemT-\\ke gene was detected only in MB15. Dot blot hybridization analyses suggested that the soil samples from waterlogged paddy-field, dry paddy-field as well as a mud pond were predominantly occupied by prokaryotic organisms which harboured hemA-]\ke gene. However, /iem7"-like sequences were also found in soil sample from dry paddy-field. Key words:    hemA-\\ks gene / hemT-\\ke gene / Southern hybridization analysis / dot blot hybridization analysis.
Northern Mindanao State Institute of Science and Technology 8600 Ampayon, Butuan City, Philippines ANINO, EMILIO .O
BIOTROPIA No. 15 (2000)
Publisher : SEAMEO BIOTROP

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11598/btb.2000.0.15.157

Abstract

Selected fungicides were tested to control damping-off affecting bagras  seedlings in the Central Nursery of the Paper Industries Corporation of the Philippines (PICOP), Surigao del Sur, Philippines. The fungicides, at three concentrations each, were applied once before seed sowing to control pre-emergence damping-off and applied again after germination to control post-emergence damping-off. Ajax detergent (2g/l H2O), Benlate (0.5 g/1 H2O), Brassicol (1.5 gv'l H2O), and Fungitox (1.0 g/1 H2O) provided the best level of control against the disease. Ajax detergent is the most practical among the best chemicals because it is cheap, locally available, not a health hazard, and less polluting. Key Words :  Eucalyptus deglupta/ Seeds/Nursery/flWzoctoma so/am'/Fungicides/Application
STORED COCOA BEANS QUALITY AFFECTED BY FERMENTATION AND EPHESTIA CAUTELLA WALKER (LEPIDOPTERA: PHYCITIDAE) INFESTATION S. DHARMAPUTRA, OKKY; SUNJAYA, SUNJAYA; RETNOWATI, INA; AMBARWATI, SANTI
BIOTROPIA No. 15 (2000)
Publisher : SEAMEO BIOTROP

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11598/btb.2000.0.15.159

Abstract

The effects of fermentation on Ephestia cautella population and cocoa beans quality in terms of moisture content, fungal population, the percentage of insect-damaged and mouldy beans, lipid and free fatty acid contents during storage were investigated together with the effects of £. cautella infestation on the quality of stored cocoa beans and weight loss. Fermented and unfermented cocoa beans with initial moisture contents of 7 or 9% were placed in ventilated plastic jars (Ikg/jar) and stored for 6 months under room conditions. Seven larvae of £. cautella instar IV (2 males and 5 females) were introduced in each jar at the beginning of storage. Untreated jars contained only cocoa beans. Population of £. cautella on fermented cocoa beans with either initial moisture content of 7 or 9% was lower than that on unfermented beans during storage. The population either on fermented or unfermented cocoa beans with initial moisture content of 7% was lower than that of 9%, and the population of all treatments increased during storage. Moisture content of all treatments either on cocoa beans with initial moisture contents of 7 or 9% had the same pattern. The percentage of insect-damaged beans on fermented cocoa beans was lower than that on unfermented cocoa beans after 5 to 6 months of storage. The damaged beans on fermented cocoa after 6 months of storage was not different than on unfermented beans after 4 months of storage. The weight loss either on fermented or unfermented cocoa beans with initial moisture content of 9% was higher than that with initial moisture content of 7%. The weight loss on fermented cocoa beans either with moisture content of 7 or 9% was lower than that on unfermented beans during storage. The weight loss either on fermented or unfermented cocoa beans increased during storage. The percentage of mouldy beans on cocoa infested with £. cautella tended to increase during storage, while on beans not infested with the insect it fluctuated during storage. The highest percentage of mouldy beans was on unfermented and infested cocoa beans. Twenty-one fungal species were isolated from all treatments of cocoa beans during storage. The total fungal population on fermented and unfermented beans had the same pattern. The population on fermented cocoa beans was lower than that on unfermented beans. Total l ipid content on fermented cocoa beans either infested or not with £. cautella having initial moisture content of 7 or 9%, was lower than that of unfermented beans. The content either on fermented or unfermented cocoa beans and either infested or not decreased during storage. Free fatty acid content on cocoa beans infested with £.  cautella was higher and significantly different than that on not infested. The content for both types increased during storage. Key Words :   Cocoa beans / Fermentation / Ephestia cautella I Moisture content / Fungal population / Insect-damaged beans / Mouldy beans / Lipid / Free fatty acid.

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