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All Journal HAYATI Journal of Biosciences Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences The Journal of Experimental Life Sciences (JELS)
Firdaus, Anggun Sausan
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Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Earth & Planetary Sciences Environmental Science Immunology & microbiology Medicine & Pharmacology Neuroscience

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Fishermen’s Perspective on Herpetofauna: A Case Study from Kuala Tungkal, Tanjung Jabung Barat, Jambi Kurniawan, Nia; Firdaus, Anggun Sausan; Nugraha, Fitra Arya Dwi; Maulidi, Andri; Kurnianto, Aguung Sih
Journal of Tropical Life Science Vol 8, No 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.01

Abstract

The population of herpetofauna (Class: Reptilia, Amphibia) is continuously declining throughout the world. Moreover, habitat changes such deforestation drive rapidly to declining process. Human communities play an important role in conserving the herpetofauna by maintaining and improving the harmonious relationship between human and environment. Therefore, these association will strongly support the conservation of herpetofauna and their habitats. This study is aimed to survey the herpetofauna communities, explore the local people perspective on herpetofauna, and the relationship between human and herpetofauna. We found 12 species observed in this survey that included to 3 order of herpetofauna: anura, squamata and testudines. Local people recognized herpetofauna species around them well and do not harm them because of their roles, such as part of nature (39%), bioindicator (33%), myth (17%), and economic value (11%). We also revealed the local knowledge on herpetofauna, as 14 local names and their roles. Despite Kuala Tungkal is a strategic area for the national port development that probably impacts herpetofauna microhabitat, it needs serious attention on herpetofaunal issues.
Sustaining Biodiversity and Ecological Roles in a Heritage Landscape: The Role of Coffee Agroforestry in Kluncing, Indonesia Kurnianto, Agung Sih; Dewi, Nilasari; Sulistyowati, Hari; Siddiq, Arif Mohammad; Ratnasari, Tri; Khowatini, Husnul; Yulianto, Roni; Firdaus, Anggun Sausan
HAYATI Journal of Biosciences Vol. 32 No. 2 (2025): March 2025
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.32.2.459-471

Abstract

This study investigates the role of coffee agroforestry in sustaining biodiversity and ecosystem functions in Kluncing, Ijen, Indonesia. By quantifying bird, butterfly, and coffee insect diversity using the Shannon-Wiener index, it evaluates ecological dynamics and their implications for sustainable land management. Bird communities demonstrated the highest diversity (2.911), indicating ecosystem stability, while butterflies (2.481) and coffee insects (1.841) exhibited lower diversity, reflecting habitat and resource limitations. Trophic network modeling using NetworkX identified keystone species like Collocalia linchi (21.9% relative abundance) among birds and the Formicidae family (29.8% relative abundance) among coffee insects, emphasizing their critical roles in ecosystem balance. Canonical Correspondence Analysis (CCA) highlighted the influence of environmental factors on species distribution. Species such as Ariadne ariadne and Delias belisama were sensitive to humidity and temperature, while Collocalia linchi favored areas with higher light intensity. The findings underscore the importance of tailored management practices to address species-specific responses to microclimatic variations. Sustainable agroforestry management is vital for preserving biodiversity, maintaining ecosystem stability, and ensuring agricultural productivity. This study also highlights challenges posed by habitat degradation and climate change, emphasizing the need for adaptive strategies to safeguard this unique agroforestry landscape.
Phylogenetic Inference on Limnonectes kuhlii Complex in Java and Sumatra Reveals Significant Novel Diversity Fahmi, Muhamad; Kadafi, Ahmad Muammar; Priambodo, Bagus; Fauzi, Muhammad Alif; Hamidy, Amir; Firdaus, Anggun Sausan; Smith, Eric Nelson; Kurniawan, Nia
The Journal of Experimental Life Science Vol. 13 No. 3 (2023)
Publisher : Graduate School, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21776/ub.jels.2023.013.03.02

Abstract

The fanged frog, Limnonectes kuhlii, exemplifies the complexity of cryptic species. Though originally described from Java, subsequent studies indicate that L. kuhlii encompasses multiple lineages, suggesting the presence of several undescribed species. Suspecting the existence of multiple undescribed species within the L. kuhlii complex in Sumatra, we collected 17 specimens from Java and Sumatra. We extracted the 12S, tRNAval, and 16S mitochondrial DNA from these specimens for phylogenetic analysis using Maximum Likelihood and Bayesian Inference methods and for estimating time divergence. Our findings uncovered two novel diversity within the L. kuhlii complex both in Sumatra and Java. Furthermore, our estimation of time divergence suggests that the diversification of L. kuhlii in Java and Sumatra was influenced by geological and climatic events, including landmass emergence and sea-level fluctuations. In conclusion, our research provides critical insights into the evolutionary complexity and diversity of the L. kuhlii complex in Sumatra and Java. While our molecular evidence suggests novel diversity, further comprehensive morphological studies are imperative to confirm and describe these potential new species. Furthermore, additional sampling across its range and deeper investigations integrating both molecular and morphological data are crucial. Keywords: fanged frogs, Limnonectes kuhlii, Limnonectes sisikdagu, phylogenetics.
Phylogenetic Patterns of Genus Megophrys (Anura: Megophryidae) from Java and Sumatra Kurniawan, Nia; Affandi, Aminuddin; Wardani, Erintha Eka; Chomsy, Indah Nur; Firdaus, Anggun Sausan; Kurnianto, Agung Sih
The Journal of Experimental Life Science Vol. 7 No. 2 (2017)
Publisher : Graduate School, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1128.003 KB) | DOI: 10.21776/ub.jels.2017.007.02.03

Abstract

The emergence of Java and Sumatra islands at the end of Miocene, has impact to the diversity of fauna that living in the islands. Amphibia, as one of a genetic information series, can be used as a good phylogenetic comparison. Genus Megophrys (Anura: Megophryidae), is a member of amphibians that live isolated at an altitude of 1000 ASL (Above Sea Level) or more. The purpose of this research is to analyze the phylogenetic patterns of genus Megophrys in Java and Sumatra based on the analysis of 16s rRNA gene. We also analyzed the zoogeography to understand the history of relationship and the establishment of these islands. We took samples on 12 localities: 10 areas of Sumatra and 2 areas of Java. We used Qiamp Blood and Tissue Kit to extract the DNA from tissues. Qualitative analysis of DNA was done by running electrophoresis on 1% agarose gel. Qualitative analysis of DNA was done by running electrophoresis on 1% agarose gel. Results show that Clade A has 2 subclasses: I and II. Subclade I consists of Sumatran specimens, whereas subclade II consists of Javanese specimens. Subclaude I and II have paraphyletic connections. Clade B classified as politomy clade consists of Megophrys sp. from West Pasaman, Megophrys sp. from West Sumatra and Megophrys sp. from Pasawaran, Lampung. The result shows that Megophrys sp. of subclade I (clade A) and clade B, belongs to the same group, both of them were originated from Sumatra. Megophrys sp. subclade I (clade A) originated from Tanggamus (Lampung) and West Lampung (Lampung) separated with 2 species of Megophrys sp. of clade B originated from Pasawaran (Lampung).Keywords: 16s rRNA, Java, Megohprys, Sumatra, zoogeography
Co-Authors Agung Sih Kurnianto Ahmad Muammar Kadafi Aminuddin Affandi AMIR HAMIDY Andri Maulidi Arif Mohammad Siddiq Bagus Priambodo Chomsy, Indah Nur Dewi, Nilasari Fahmi, Muhamad Fauzi, Muhammad Alif Fitra Arya Dwi Nugraha Hari Sulistyowati Khowatini, Husnul Kurnianto, Aguung Sih Nia Kurniawan Ratnasari, Tri Smith, Eric Nelson Wardani, Erintha Eka Yulianto, Roni