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All Journal Jurnal Ilmu-Ilmu Peternakan (Indonesian Journal of Animal Science) Jurnal Ternak Tropika ZOO INDONESIA Zoo Indonesia
Shidiq, Fajrin
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Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Other

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CHECKLIST ON FAUNA DIVERSITY GUNUNG HALIMUN SALAK NATIONAL PARK: Cikaniki-Citalahab Qodri, Agmal; Utama, Ilham Vemandra; Ferdian, Pamungkas Rizki; Dwijayanti, Endah; Rusdianto, Rusdianto; Yohanna, Yohanna; Mulyadi, Mulyadi; Supriatna, Nanang; Hernawati, Rena Tri; Shidiq, Fajrin; Encilia, Encilia; Animalesto, Gloria; Sushadi, Pangda Sopha; Budi, Anang Setyo; Rizal, Syaiful; Nurhaman, Ujang; Herlambang, Alamsyah Elang Nusa; Nurinsiyah, Ayu Savitri
ZOO INDONESIA Vol 29, No 2 (2020): Desember 2020
Publisher : Masyarakat Zoologi Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar

Abstract

The Cikaniki resort is one of the most accessible research stations located in the Gunung Halimun Salak National Park (GHSNP). It is in adjacent with Citalahab village. The Research Center for Biology, Indonesian Institute of Sciences and other institutions have conducted intensive research on the fauna diversity of GHSNP from this station. Here we formulate a checklist on fauna diversity surrounding the Cikaniki Research Station and Citalahab, GHNSP from various sources, i.e. field work, museum collections (Museum Zoologicum Bogoriense), scientific publications, and technical report. The study was conducted from October 2019 until October 2020. The latest field work was conducted from 8-10 October 2019 under the framework of the Jungle Survival and Biological Collection Management 2019 program. In total, 821 fauna species were recorded in Cikaniki-Citalahab areas which comprises of 48 species of Mollusca, five species of Malacostraca, 523 species of Insects, 22 species of Actinopterygii, 63 species of Amphibia and Reptiles, 115 species of Aves and 45 species of Mammals. The diversity contributes 62.1% of the total 1,323 known fauna species in GHSNP. Five number of species were assigned as endangered and three species critical endangered by IUCN. In addition, 123 species were endemic to Java and 34 species protected by Regulation of the Ministry of Environment and Forestry Republic of Indonesia Number P.106/MENLHK/SETJEN/KUM.1/12/2018. The areas of Cikaniki and Citalahab are rich in biodiversity. Although both areas are in close intact with human activity, research and ecotourism, the need of continuously spreading awareness and enforce species and area conservation is inevitable.
CHECKLIST ON FAUNA DIVERSITY GUNUNG HALIMUN SALAK NATIONAL PARK: Cikaniki-Citalahab Qodri, Agmal; Utama, Ilham Vemandra; Ferdian, Pamungkas Rizki; Dwijayanti, Endah; Rusdianto, Rusdianto; Yohanna, Yohanna; Mulyadi, Mulyadi; Supriatna, Nanang; Hernawati, Rena Tri; Shidiq, Fajrin; Encilia, Encilia; Animalesto, Gloria; Sushadi, Pangda Sopha; Budi, Anang Setyo; Rizal, Syaiful; Nurhaman, Ujang; Herlambang, Alamsyah Elang Nusa; Nurinsiyah, Ayu Savitri
ZOO INDONESIA Vol 29, No 2 (2020): Desember 2020
Publisher : Masyarakat Zoologi Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.52508/zi.v29i2.4037

Abstract

The Cikaniki resort is one of the most accessible research stations located in the Gunung Halimun Salak National Park (GHSNP). It is in adjacent with Citalahab village. The Research Center for Biology, Indonesian Institute of Sciences and other institutions have conducted intensive research on the fauna diversity of GHSNP from this station. Here we formulate a checklist on fauna diversity surrounding the Cikaniki Research Station and Citalahab, GHNSP from various sources, i.e. field work, museum collections (Museum Zoologicum Bogoriense), scientific publications, and technical report. The study was conducted from October 2019 until October 2020. The latest field work was conducted from 8-10 October 2019 under the framework of the Jungle Survival and Biological Collection Management 2019 program. In total, 821 fauna species were recorded in Cikaniki-Citalahab areas which comprises of 48 species of Mollusca, five species of Malacostraca, 523 species of Insects, 22 species of Actinopterygii, 63 species of Amphibia and Reptiles, 115 species of Aves and 45 species of Mammals. The diversity contributes 62.1% of the total 1,323 known fauna species in GHSNP. Five number of species were assigned as endangered and three species critical endangered by IUCN. In addition, 123 species were endemic to Java and 34 species protected by Regulation of the Ministry of Environment and Forestry Republic of Indonesia Number P.106/MENLHK/SETJEN/KUM.1/12/2018. The areas of Cikaniki and Citalahab are rich in biodiversity. Although both areas are in close intact with human activity, research and ecotourism, the need of continuously spreading awareness and enforce species and area conservation is inevitable.
The Favorable Allele of CAPN1-316 Genetic Marker is Absent in Bali and Sumbawa Cattle Shidiq, Fajrin; Anwar, Saiful; Lestari, Novi Cahya; Kusdianawati, Kusdianawati
Jurnal Ilmu-Ilmu Peternakan Vol. 33 No. 3 (2023): December 2023
Publisher : Faculty of Animal Science, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21776/ub.jiip.2023.033.03.04

Abstract

The micromolar calcium-activated neutral protease 1 (CAPN1) gene encodes the u-calpain enzyme, which plays a crucial role in meat tenderisation. Genetic diversity within the CAPN1 gene, specifically a nucleotide substitution from G to C in exon nine resulting in a change from glycine to alanine at position 316 (CAPN1-316 marker), is known to significantly affect meat tenderness. This study aimed to assess the polymorphism of the CAPN1-316 locus in Bali and Sumbawa cattle. A total of 293 blood samples, 193 from Bali cattle and 100 from Sumbawa cattle were extracted and genotyped using PCR-RFLP with BtgI restriction enzyme (recognition sequence: 5'-C*CRYGG-3') applied to 706 bp PCR products. The results showed the presence of only one genotype (GG genotype) and one allele (G allele) in all DNA samples obtained from the Bali and Sumbawa cattle populations studied. In conclusion, the CAPN1-316 genetic marker showed a lack of diversity or monomorphism in Bali and Sumbawa cattle, making it unsuitable for further association studies in these breeds. Consequently, the CG/AG haplotype identified in Sumbawa cattle warrants further investigation and could serve as an alternative genetic marker, especially due to its monomorphism at the CAPN1-316 locus.
Identifikasi Keragaman Gen Myostatin (MSTN|BsrI) Pada Ayam Kampung Dengan Metode PCR-RFLP Shidiq, Fajrin; Yulianto, Yulianto; Gunawan, Asep; Sumantri, Cece
TERNAK TROPIKA Journal of Tropical Animal Production Vol. 24 No. 1 (2023): TERNAK TROPIKA Journal of Tropical Animal Production
Publisher : Jurusan Produksi Ternak, Fakultas Peternakan, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21776/jtapro.2023.024.01.8

Abstract

Myostatin (MSTN) atau Growth and Differentiation Factor 8 (GDF8) adalah anggota dari superfamili Transforming Growth Factor (TGF)-β yang bertindak sebagai pengatur negatif pertumbuhan otot rangka. Mutasi pada ekson 2, di mana basa timin pada gen myostatin berubah menjadi basa guanin, mengubah asam amino leusin menjadi arginin, yang mempengaruhi berat badan ayam. Penelitian ini bertujuan untuk mengidentifikasi keragaman gen myostatin pada 132 ekor ayam kampung yang terdiri dari ayam kampung Ciawi dan kampung Sukabumi. Sebagai perbandingan keragaman pada populasi besar digunakan ayam broiler, nunukan dan petelur. Keragaman gen diidentifikasi menggunakan metode Polymerase Chain Reaction - Restriction Fragment Length Polymorphism (PCR-RFLP) menggunakan enzim restriksi BsrI. Produk amplifikasi sepanjang 247 pb, genotipe yang ditemukan pada keragaman gen MSTN|BsrI adalah GG, GT dan TT. Hasil analisis menunjukkan bahwa frekuensi genotipe GT dan TT lebih tinggi dibandingkan dengan genotipe GG. Pada semua populasi frekuensi alel T lebih besar dari frekuensi alel G yaitu 0.72 dan 0.28. Gen MSTN|BsrI pada populasi ayam kampung Ciawi dan ayam broiler berada dalam kesetimbangan Hardy-Weinberg. Populasi ayam kampung Ciawi dan Sukabumi menunjukkan skor heterozigositas (Ho) lebih tinggi dari skor heterozigositas yang diharapkan (He), sedangkan ayam pedaging menunjukkan skor heterozigositas (Ho) sama dengan skor heterozigositas yang diharapkan (He). Gen MSTN|BsrI pada populasi Kampung Ciawi, Kampung Sukabumi dan ayam broiler bersifat polimorfik
Co-Authors Alamsyah Elang Nusa Herlambang, Alamsyah Elang Nusa Animalesto, Gloria Asep Gunawan Budi, Anang Setyo Cece Sumantri Dwijayanti, Endah Elfrida Ratnawati Encilia, Encilia Ferdian, Pamungkas Rizki Kusdianawati Lestari, Novi Cahya Mulyadi Mulyadi Nana Supriatna Nurhaman, Ujang Nurinsiyah, Ayu Savitri Qodri, Agmal Rena Tri Hernawati Rusdianto Rusdianto, Rusdianto Saiful Anwar Sushadi, Pangda Sopha Syaiful Rizal Yohanna, Yohanna Yulianto Yulianto