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Computational screening of boswellic acid for its antibacterial activity against acne-causing bacteria via molecular docking Dedi Damhuri; Ietje Wientarsih; Rini Madyastuti Purwono; Agustin Indrawati; Asri Rizky; Jessica Anggun Safitri; Ahmad Syarifuddin
Jurnal Teknosains Vol 15, No 1 (2025): December
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/teknosains.106278

Abstract

Acne vulgaris (AV) is a common inflammatory-skin disorder associated with bacterial infections, particularly Cutibacterium acnes, Staphylococcus aureus, and Staphylococcus epidermidis. The rising resistance to conventional antibiotics has prompted the exploration of natural compounds such as boswellic acid, which is known for its antibacterial potential. This study aimed to evaluate the antibacterial activity of boswellic acid using an in-silico approach through molecular docking against several essential bacterial target proteins implicated in acne pathogenesis. The boswellic acid ligand was obtained from the PubChem database, while the three-dimensional structures of the target proteins were retrieved from the RCSB Protein Data Bank. Blind docking was performed using AutoDock Tools version 1.5.7 and AutoDock Vina, followed by interaction analysis using Discovery Studio Visualizer and Visual Molecular Dynamics (VMD). Nine bacterial proteins involved in vital cellular processes such as metabolism, protein synthesis, biofilm formation, and DNA replication were selected, including transcriptional regulator TcaR, penicillin-binding proteins (PBPs), tyrosyl-tRNA synthetase (TyrRS), 3-ketoacyl-ACP synthase III (KAS III), CRISPR-associated protein, DNA gyrase, transcriptional regulator MarR, methylmalonyl-CoA epimerase, and accumulation-associated protein (Aap). The docking results demonstrated that all target proteins exhibited negative binding energy values (< 0), indicating thermodynamically stable and spontaneous interactions. Among these, TcaR displayed the highest binding affinity with a binding energy of −10.2 kcal/mol and formed nine conventional hydrogen bonds, reflecting a particular and stable interaction. Key interacting residues included Gln: B61, HisA:42, AsnA:20, AsnB:17, and Arg1:110. In contrast, the Aap protein formed only one covalent bond, indicating the weakest interaction. These findings suggest that boswellic acid effectively inhibits key bacterial proteins, particularly those involved in transcriptional regulation and biofilm development. Therefore, boswellic acid holds significant potential as a safe and effective topical antibacterial agent for further growth in biomedical engineering-based formulations.
Antibiotic Resistance of Escherichia coli and Staphylococcus aureus Bacteria in Goats in Pematang Gajah, Jambi Dedi Damhuri; Yatno Yatno; Asri Rizky; Jessica Anggun Safitri; Ahmad Syarifuddin
Jurnal Biologi Tropis Vol. 26 No. 2 (2026): April - Juni
Publisher : Biology Education Study Program, Faculty of Teacher Training and Education, University of Mataram, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29303/jbt.v26i2.11678

Abstract

Limited knowledge among smallholder goat farmers regarding appropriate antibiotic use may contribute to the emergence of antimicrobial resistance in livestock-associated bacteria. This study aimed to identify bacterial isolates and evaluate antibiotic resistance patterns of bacteria obtained from fecal and nasal mucosal swabs of goats in Pematang Gajah. Samples were collected from nine goats with three repeated examinations. Bacterial identification was performed using Gram staining followed by standard biochemical tests. The results showed that 8 of 9 isolates (≈90%) from fecal swabs exhibited biochemical characteristics consistent with Escherichia coli, including Indole (+), MR (+), VP (−), Citrate (−), TSIA A/A with gas production, positive motility, and metallic green sheen on EMB agar. A total of 7 of 9 isolates (≈76%) from nasal mucosal swabs demonstrated typical characteristics of Staphylococcus aureus, namely Gram-positive cocci, catalase-positive, coagulase-positive, mannitol fermentation positive, and β-hemolysis. Antibiotic susceptibility testing conducted on one isolate of E. coli and one isolate of S. aureus with three replications revealed the highest inhibition zones in E. coli against enrofloxacin (23.33 ± 0.58 mm) and gentamicin (21.33 ± 0.58 mm), categorized as sensitive, while high resistance was observed against tylosin (8.33 ± 0.58 mm) and penicillin–streptomycin (9.33 ± 0.58 mm). Staphylococcus aureus isolates showed high sensitivity to enrofloxacin (24.33 ± 0.58 mm), tylosin and gentamicin (22.33 ± 0.58 mm), but resistance to penicillin–streptomycin and ampicillin. These findings indicate variability in antimicrobial susceptibility among goat-associated bacteria and highlight the importance of susceptibility-based antibiotic selection to reduce antimicrobial resistance risk.