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Indonesian Journal of Chemistry

ijc
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Published by Universitas Gadjah Mada

ISSN : 14119420 EISSN : 24601578 DOI : -

Core Subject : Science, Engineering,

Chemical Engineering, Chemistry & Bioengineering Chemistry

Indonesian Journal of Chemistry is an International, peer-reviewed, open access journal that publishes original research articles, review articles, as well as short communication in all areas of chemistry including applied chemistry. The journal is accredited by The Ministry of Research, Technology and Higher Education (RISTEKDIKTI) No : 21/E/KPT/2018 (in First Rank) and indexed in Scopus since 2012. Since 2018 (Volume 18), Indonesian Journal of Chemistry publish four issues (numbers) annually (February, May, August and November).

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Articles 16 Documents

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Search results for , issue "Vol 13, No 3 (2013)" : 16 Documents clear

FLAVANONES FROM THE WOOD OF Morus nigra WITH CYTOTOXIC ACTIVITY Ferlinahayati Ferlinahayati; Yana Maolana Syah; Lia Dewi Juliawaty; Euis Holisotan Hakim
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

Two flavanone derivatives, norartocarpanone (1) and euchrenone a7 (2) had been isolated for the first time from the methanol extract of the wood of Morus nigra. The structures of these compounds were determined base on spectral evidence, including UV, IR, and NMR. The first compound also confirmed by comparison with the reported data. Cytotoxic properties of these compounds were evaluated against murine leukemia P-388 cells. Euchrenone a7 (2) was found more cytotoxic than norartocarpanone (1) with their IC50 7.8 and 12.7 mg/mL respectively.

THE INFLUENCE OF PVA.cl.CITRIC ACID/CHITOSAN MEMBRANE HYDROPHICILITY ON THE TRANSPORT OF CREATININE AND UREA Retno Ariadi Lusiana; Dwi Siswanta; Mudasir Mudasir; Takashi Hayashita
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

The influence of cross-linking and membrane hydrophilicity on the transport rate had been studied using a membrane prepared from a mixture of chitosan/PVA cross-linked citric acid (PVA.cl.CA) for creatinine and urea transport. The optimum mole ratio of PVA:citric acid as well as the best composition of chitosan:PVA.cl.CA were determined using creatinine transport study. Using the optimum compositions, further study was done using different thickness of the membrane in transporting creatinine, urea and a mixture of 3 species (creatinine, urea and vitamin B12). Membrane characterization was done using FT-IR spectrophotometer, water absorption test, TG/DTG and SEM. The results showed that the optimum composition PVA:citric acid was obtained to be 90:1, having % WU of 113.74% and creatinine transport percentage of 18.16%. Meanwhile, the optimum composition of chitosan:PVA.cl.CA was found at 4:6 ratio having % WU and % transport of 136.67% and 24.26%, respectively. The optimum transport capacity was found for membrane thickness of 50 µm with WU% at 139.61% and the percent transport of creatinine and urea each was 38.93% and 60.36%. The presence vitamin B12 in the solution of is proved to disturb the transport of creatinine and urea through the membrane. Finally, hydrophilicity seemed to give substantial contribution in the transport process as well as the mechanical strength of the membrane.

PRODUCTION AND CHARACTERIZATION OF BIOSURFACTANT BY Pseudomonas fluorescens USING CASSAVA FLOUR WASTEWATER AS MEDIA Venty Suryanti; Soerya Dewi Marliyana; Desi Suci Handayani; Desi Ratnaningrum
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

Biosurfactant with efficient emulsification properties could be produced by Pseudomonas flourescens using cassava flour wastewater (manipueira) as media. The ability of P. flourescens to produce biosurfactant could suggest potential use in industrial and environmental applications. Media containing a mixture of natural manipueira and nutrient broth with 48 h fermentation was the optimum condition for the biosurfactant production. Based on UV-Vis and FT-IR spectra, the biosurfactant was indicated as rhamnolipids containing hydroxyl, ester, carboxylic and aliphatic carbon chain functional groups. Biosurfactant exhibited critical micelle concentration (CMC) value of 715 mg/L and reduced the surface tension of the water from 80 mN/m to 59 mN/m. The biosurfactant was able to decrease the interfacial tension about 51-70% when benzyl chloride, palm oil and kerosene were used as water-immiscible compounds. The biosurfactant was able to form stable emulsion until 30 days when paraffin, soybean oil, lubricant oil and kerosene were used as water-immiscible compounds.

ISOLATION AND PRESENCE OF ANTIMALARIAL ACTIVITIES OF MARINE SPONGE Xestospongia sp. Murtihapsari Murtihapsari; Apriani Sulu Parubak; Bertha Mangallo; Wiwied Ekasari; Puji Budi Asih; Ayu Indah Lestari
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

Plasmodium falciparum, the agent of malignant malaria, is one of mankind's most severe scourges, mainly in the tropic world. Efforts to develop preventive vaccines or remedial drugs are handicapped by the parasite's rapid evolution of drug resistance. Here, we presented an advance work on examination of antimalarial component from marine life of Xestospongia sp., the study is based on hexane extraction method. The premier result, we obtained five fractions. Among these five fractions, the fourth has the most potent inhibitory against the growth of P. falciparum 3D7 with an IC50: 7.13 µg/mL. A compiled spectrum analysis, FTIR, 1H-NMR and GC-MS, revealed that the fourth fraction consisted abundantly of two secondary metabolites such as flavonoids and triterpenoids. Finally, our results suggest a plausible structure rooted to the base of ibuprofen.

EXTENDING THE LIFE TIME OF POLYMER INCLUSION MEMBRANE CONTAINING COPOLY(EUGENOL-DVB) AS CARRIER FOR PHENOL TRANSPORT Agung Abadi Kiswandono; Dwi Siswanta; Nurul Hidayat Aprilita; Sri Juari Santosa; Takashi Hayashita
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

A study of phenol transport was conducted in correlation to the evaluation of copoly(eugenol-divinylbenzene, DVB) as carrier using polymer inclusion membrane (PIM) method. The performance of copoly(eugenol-DVB) was observed based on the parameters of Membrane Liquid (ML) loss. Some variations, including the effect of plasticizer concentration, stirring speed, and measurement of lifetime of the membrane, were studied. Related to the lifetime, the effect of the concentration of NaNO3 salt was also studied. The tensile strength of membrane before and after the transport was measured and their morphology was characterized using SEM (Scanning Electron Microscope). Results of the study indicate that the value of the tensile strength of the membrane after the transport was lower than that before the transport. The lifetime of the membrane was not only depending on the capacity of the membrane in restraining ML loss, but also on the concentration of salt that was added to the solution of source phase. In addition, the lifetime of the membrane had correlation to the number of ML loss, i.e. the addition of salt lead to lower amount of ML loss and gave longer lifetime. With the addition of 0.1 M NaNO3, the lifetime of the membrane extended to 62 days, which is longer than the lifetime without the addition of NaO3 which was only 7 days.

POLYMERIC BIOMATERIALS FILM BASED ON POLY(VINYL ALCOHOL) AND FISH SCALE COLLAGEN BY REPETITIVE FREEZE-THAW CYCLES FOLLOWED BY GAMMA IRRADIATION Dian Pribadi Perkasa; Erizal Erizal; Basril Abbas
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

The polymeric biomaterial film based on poly(vinyl alcohol) (PVA) and fish collagen of Lates calcarifer scale were synthesized by three times freeze-thaw cycles followed by gamma irradiation at varied doses of 0, 10, 20, and 30 kGy respectively. Characteristic of PVA/collagen film as effect of constituting polymers and cross linking methods were investigated using Fourier Transform Infrared (FTIR) spectrophotometer, Differential Scanning Calorimetry (DSC), Universal Testing Machine (UTM), and Chroma Mater. Its gel fraction and swelling kinetic were determined by gravimetry. The result showed that IR spectra of controlled and irradiated film demonstrated characteristic vibration bands of both constituting materials. The DSC analysis revealed that gamma irradiation induced interaction between PVA and collagen at molecular level. Improvement of tensile properties by gamma irradiation was observed on tensile strength at 30 kGy with p < 0.05. Gamma irradiation also significantly (p < 0.05) increased yellowness of PVA/collagen film, reduced swelling kinetic, and increased gel fraction of films.

SECONDARY METABOLITE FROM ENDOPHYTIC FUNGI Chochlibus lunatus OF THE RHIZOME OF TUNJUK LANGIT (Helmynthostachys zaylanica) Fitrya Fitrya; Muharni Muharni
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

Helmynthostachys zaylanica which is locally known as tunjuk langit is included Ophioglosaceae genus. The rhizome of tunjuk langit is traditionally used as anticancer. Chochlibolus lunatus was isolated from the tissues of tunjuk langit rhizome. Fungal strain was identified based on the characteristics of its colony and cell morphology. Chochlibolus lunatus was cultured in Potato Dextrose Broth (PDB) medium and it was then extracted using ethylacetate (EtOAc). A secondary metabolite compound was isolated from EtOAc extract. This isolation was done by chromatography technique and the structure of this compound was determined by mean of UV, IR and NMR spectroscopic technique. Isolated compound is like oil. Based on spectra analyses, we concluded that this isolated compound was 11,12,13-trimethylheksyl-2-methylhexa-2,4-dienoat.

COMPARATIVE EVALUATION OF CONVENTIONAL VERSUS RAPID METHODS FOR AMPLIFIABLE GENOMIC DNA ISOLATION OF CULTURED Azospirillum sp. JG3 Stalis Norma Ethica; Dilin Rahayu Nataningtyas; Puji Lestari; Istini Istini; Endang Semiarti; Jaka Widada; Tri Joko Raharjo
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

As an initial attempt to reveal genetic information of Azospirillum sp. JG3 strain, which is still absence despite of the strains' ability in producing valued enzymes, two groups of conventional methods: lysis-enzyme and column-kit; and two rapid methods: thermal disruption and intact colony were evaluated. The aim is to determine the most practical method for obtaining high-grade PCR product using degenerate primers as part of routine-basis protocols for studying the molecular genetics of the Azospirillal bacteria. The evaluation includes the assessment of electrophoresis gel visualization, pellet appearance, preparation time, and PCR result of extracted genomic DNA from each method. Our results confirmed that the conventional methods were more superior to the rapid methods in generating genomic DNA isolates visible on electrophoresis gel. However, modification made in the previously developed DNA isolation protocol giving the simplest and most rapid method of all methods used in this study for extracting PCR-amplifiable DNA of Azospirillum sp. JG3. Intact bacterial cells (intact colony) loaded on electrophoresis gel could present genomic DNA band, but could not be completely amplified by PCR without thermal treatment. It can also be inferred from our result that the 3 to 5-min heating in dH2O step is critical for the pre-treatment of colony PCR of Azospirillal cells.

PyPLIF-ASSISTED REDOCKING INDOMETHACIN-(R)-ALPHA-ETHYL-ETHANOLAMIDE INTO CYCLOOXYGENASE-1 Muhammad Radifar; Nunung Yuniarti; Enade Perdana Istyastono
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

Identification of Protein-Ligand Interaction Fingerprints (PLIF) has been performed as the rescoring strategy to identify the best pose for the docked poses of indomethacin-(R)-α-ethyl-etanolamide (IMM) in the binding site of cyclooxygenase-1 (COX-1) from simulations using PLANTS molecular docking software version 1.2 (PLANTS1.2). Instead of using the scoring functions included in the docking software, the strategy presented in this article used external software called PyPLIF that could identify the interactions of the ligand to the amino acid residues in the binding pocket and presents them as binary bitstrings, which subsequently were compared to the interaction bitstrings of the co-crystal ligand pose. The results show that PyPLIF-assisted redocking strategy could select the correct pose much better compared to the pose selection without rescoring. Out of 1000 iterative attempts, PyPLIF-assisted redocking simulations could identify 971 correct poses (more than 95%), while the redocking simulations without PyPLIF could only identify 500 correct poses (50%).These works have also provided us with the initial step of the construction of a valid Structure-Based Virtual Screening (SBVS) protocol to identify COX-1 inhibitors.

A NEW CYTOTOXIC DOLABELLANE FROM THE INDONESIAN SOFT CORAL Anthelia sp. Anggia Murni; Novriyandi Hanif; Junichi Tanaka
Indonesian Journal of Chemistry Vol 13, No 3 (2013)
Publisher : Universitas Gadjah Mada

One new dolabellane (1) and two known diterpenoids stolonidiol (2) and clavinflol B (3) have been isolated from the ethyl acetate extract of the Indonesian soft coral Anthelia sp. A new compound 1 exhibited a moderate cytotoxicity against NBT-T2 cells at 10 µg/mL, while known compounds 2 and 3 showed cytotoxicity at 1 and 0.5 µg/mL, respectively. Structure of the new compound 1 was elucidated by interpretation of NMR spectroscopic data (1D and 2D NMR data) and mass spectrometry (ESIMS data) as well as comparison with those of related ones. This finding should be useful for anti cancer drug development of the promising dolabellane-types compound.

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