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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
 100   101   102   103   104 
Traditional markets and diversity of edible plant trading: Case study in Ujung Berung, Bandung, West Java, Indonesia BUDIAWATI SUPANGKAT ISKANDAR; JOHAN ISKANDAR; BUDI IRAWAN; RUHYAT PARTASASMITA
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190211

Abstract

Iskandar BS, Iskandar J, Irawan B, Partasasmita R. 2018. Traditional markets and diversity of edible plant trading: Case study in Ujung Berung, Bandung, West Java, Indonesia. Biodiversitas 19: 437-452. Traditional markets are where traders and buyers meet; places where the supply and demand activities of selling and buying between traders and buyers occur. Buying and selling activities are realized based on the practice of bargaining, made possible by a negotiated willingness to slide a price. In bargaining, social relationships are activated. Traditional markets are managed by local companies called PD Pasar. The traders are generally small business groups. A particular feature of traditional markets is that they are primarily places to trade various foodstuffs that are needed by urban dwellers, including products such as rice and other additional staple foods, vegetables, spices and fruits. The aim of the study reported here was to detail various edible plant species and their variations (landraces) that are the source of products traded in a typical traditional market of West Java, Indonesia. The products of interest to us included carbohydrate staple foods, vegetables, spices, and fruits, produced by village farmers. We investigated the trading network for these edible plant commodities; and the role of traditional markets in supporting the conservation of biodiversity in the edible plants traded. The method used in this study was qualitative, applying an ethnobotanical approach. Field techniques of direct observation, participant observation and deep interview were applied. The results of the study showed that the traditional market of Ujung Berung, in Bandung, West Java, plays an important role in trading various edible plants produced by village farmers. Altogether, 120 plant species were recorded in the market, out of a total of 188 variants (species, and intra-species landraces), representing 44 families. There were 103 species that provided vegetables, 58 species used as spices, 39 species used for their fruits, and 10 that provided carbohydrate staple foods. In general, these plants commodities traded in the Ujung Berung traditional market are supplied by village traders or are bought from the central market in Bandung. The traditional market of Ujung Berung, Bandung has an important role as a place of economic activity for small businesses Furthermore, it is a factor supporting biodiversity in the edible plants traded.
The comparison of aboveground C-stock between cacao-based agroforestry system and cacao monoculture practice in West Sumatra, Indonesia SANTHYAMI SANTHYAMI; ADI BASUKRIADI; MUFTI PETALA PATRIA; ROCHADI ABDULHADI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190214

Abstract

Santhyami,  Basukriadi A, Patria MP, Abdulhadi R. 2018. The comparison of aboveground C-stock between cacao-based agroforestry system and cacao monoculture practice in West Sumatra, Indonesia. Biodiversitas 19: 472-479. One of the main cause of climate change is deforestation for agricultural purposes. Therefore, Agroforestry System-AFS is regarded as a benign approach to reduce pressure on natural forest while still meeting the needs of local communities. In West Sumatra, Indonesia, small-scale AFS with cacao (Theobroma cacao L.) is the most commonly developed agroforestry system. At present, there is a tendency to intensify cacao-based AFS by reducing the shade trees leading to monoculture practice.  Although many studies had demonstrated the benefits of agroforestry over monoculture, not many studies have been looking at the comparison of carbon stock (C-Stock) of cacao-based AFS with different types of shade trees, particularly in West Sumatra. This study aimed to compare the aboveground C-Stock of three types of cacao-based AFS developed in West Sumatra; (i) Cacao-Rubber (CR), (ii) Cacao Multi-strata (CM), (iii) Cacao-Coconut (CC) with monoculture practice. Using replicated nested plot design, data were collected in April-June 2017 in Pasaman District for CR and CM and Padang Pariaman District for CC and monoculture. Biomass of cacao and shade trees and saplings were determined using allometric equations. The highest total aboveground biomass and C-Stock was found in CC AFS system (an average of 206.84 Mg ha-1 containing 103.42 MgC ha-1, respectively). The lowest total aboveground biomass and C-Stock was found in monoculture system (an average of 20 Mg ha-1 containing 10 MgC ha-1, respectively). Cacao-based AFS in West Sumatra has the potential to contribute to carbon storage by increasing the stocking density of shade tress through carbon-friendly intensification. An additional incentives should be considered such as including the farmers in environmental service reward schemes for maintaining high C stocks in their farms.
Short Communication: Biometric of freshwater crayfish (Cherax spp.) from Papua and West Papua, Indonesia ABINAWANTO ABINAWANTO; HANI HAMIDAH; ANOM BOWOLAKSONO; RURY EPRILURAHMAN
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190216

Abstract

Abinawanto, Hamidah H, Bowolaksono A, Eprilurahman R. 2018. Short Communication: Biometric of freshwater crayfish (Cherax spp.) from Papua and West Papua,, Indonesia. Biodiversitas 19: 489-495. Freshwater crayfish, Cherax spp. is a native crayfish species in Papua, Indonesia. Biometric information of this crayfish species in Indonesia is limited. Hence, this study aimed to provide these data. Specimens were collected from West Papua Province, i.e., from Uter Lake (Atinjo Subdistrict, Maybrat) and Seremuk River (Haha Village, Seremuk Subdistrict, South Sorong), respectively. Besides, the specimens were also collected from Papua Province in Baliem River at Pike Village, Hubukiak Subdistrict, and Wesaput Village, Wesaput Subdistrict, Jayawijaya. Data were analyzed using canonical discriminant function (CDF). The results showed that the longest carapace of Cherax spp. was 97.83 mm found in Baliem River at Pike Village. CDF analysis showed that there were three population groups of Cherax spp. from four locations. The first group originated from Uter Lake (Atinjo Subdistrict) and Seremuk River (Haha village). The second group was from Baliem River (Pike Village; Hubukiak Subdistrict, Jayawijaya and the third group from Baliem River (Wesaput Village; Wesaput Subdistrict)
Identification of potentially pathogenic bacteria from tilapia (Oreochromis niloticus) and channel catfish (Clarias batrachus) culture in Samarinda, East Kalimantan, Indonesia ESTI HANDAYANI HARDI; RUDY AGUNG NUGROHO; GINA SAPTIANI; RIA SARINAH; MAULINA AGRIANDINI; MIRA MAWARDI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190215

Abstract

Hardi EH, Nugroho RA, Saptiani G, Sarinah R, Anggraidini M, Mawardi M. 2018. Identification of potentially pathogenic bacteria from tilapia (Oreochromis niloticus) and channel catfish (Clarias batrachus) culture in Samarinda, East Kalimantan, Indonesia. Biodiversitas 19: 480-488. This research was conducted to isolate, identify, and characterize pathogenic bacteria from feces and water of tilapia (Oreochromis niloticus) and channel catfish (Clarias batrachus) culture from two selected locations in Samarinda, East Kalimantan, Indonesia. Bacteria were cultured and isolated on NA, TSA, and BHIA media at 30oC for 24 h. Colonies of the isolated bacteria were characterized morphologically in terms of their shape, chromogenesis, edge, and size. Antibiotic sensitivity test on each bacterial isolate was completed using inhibition zone tests. Commercial antibiotics used in this research were nitrofurantoin, ciprofloxacin, oxytetracycline, chloramphenicol, nalidixic acid, gentamicin, and norfloxacin. Koch’s postulates test was done by intraperitoneal injection of bacterial suspension to tilapia (15 g weight) at 103-109 CFU mL-1 in triplicates to determine the pathogenicity of each bacterium. Overall, there were 37 isolates obtained from different sources and growth media that belonged to 14 species: Acinetobacter calcoaceticus (1 isolate), Aerococcus urinae (2 isolates), Aerococcus viridans (1 isolate), Aeromonas hydrophila (1 isolate), Citrobacter freundii (5 isolates), Enterobacter amnigenus (2 isolate), Enterobacter cloacae (4 isolates), Escherichia coli (3 isolates), Listeria sp. (1 isolate), Niseria sp. (4 isolates), Pantoea spp. (1 isolate), Pseudomonas aeruginosa (1 isolate), Staphylococcus aureus (9 isolates), and Streptococcus iniae (2 isolates). Sixteen of the isolates were grown in BHIA medium, 12 isolates in TSA medium and 9 isolates in NA medium. The highest mortality was found in tilapia injected with Enterobacter sp., Listeria sp. and Streptococcus sp. at a density of 109 CFU mL-1. However, the number of bacteria causing mortality in fish was approximately 104-108 CFU mL-1. All bacteria detected in the tilapia and channel catfish cultures were also known as putative pathogens in human.
Tree species composition and structure of dry forest in Mutis Timau Protected Forest Management Unit of East Nusa Tenggara, Indonesia AAH AHMAD ALMULQU; NOULKAMOL ARPORNPONG; JARUNTORN BOONYANUPHAP
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190217

Abstract

Almulqu AA, Arpornpong N, Boonyanuphap J. 2018. Tree species composition and structure of dry forest in Mutis Timau Protected Forest Management Unit of East Nusa Tenggara, Indonesia. Biodiversitas 19: 496-503. Plots 10,000 m2 were established in four sites of Mutis Timau Protected Forest Management Unit (Mutis Timau PFMU), in order (Koonkhunthod 2007)to determine tree species density, basal area, importance value index, species richness and to identify the relationship betwen species richness and abundance of trees. A total of 94 species belonging to 72 genera and 45 families were recorded. Species richness and forest structure were different between sites. Moraceae was the dominant tree family at most sites, particulary for Eucalyptus urophylla. The results suggest controlling the number of species, level on species distribution pattern, silvicultural interventions to pioneer species through thinning liberation, seeding and planting (pioneer species) could accelerate the tree regeneration of Mutis Timau PFMU in Kupang District, East Nusa Tenggara Province, Indonesia.
Growth of typha grass (Typha angustifolia) on gold-mine tailings with application of arbuscular mycorrhiza fungi LULUK SETYANINGSIH; ARUM SEKAR WULANDARI; HAMIM HAMIM
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190218

Abstract

Setyaningsih L, Wulandari AS, Hamim H. 2018. Growth of typha grass (Typha angustifolia) on gold-mine tailings with application of arbuscular mycorrhiza fungi. Biodiversitas 19: 504-509. Gold mine tailings contain extreme physical and chemical properties, which inhibit plant growth due to lower nutrition and higher heavy metal contaminants. Typha (Typha angustifolia) is type of grass growing well on waterlogged area including tailing dam. The objective of this study was to investigate the effect of arbuscular mycorrhizal fungi (AMF) in combination with compost and soil on the typha growth in gold mine tailings. The study was conducted in greenhouse by inoculating two AMF isolates (Glomus etunicatum and G. manihotis) to typha seedlings grown in pure tailing media, mixed tailing-compost media, and mixed tailing-compost-soil media. The compatibility and growth of typha grass were analysed after 1 month. Results showed that G. etunicatum and G. manihotis application significantly increased AMF colonization of typha roots up to 16.6% and 21.8% respectively. The length, number of leaves and biomass of typha also increased up to 90%, 50% and 97% respectively compared to those without AMF inoculation. G. etunicatum contributed the best growth of typha grown in mixed compost-soil-tailings, resulting in double increase of its length and biomass. The application of G. manihotis did not significantly increase the growth of typha in mixed media; however, under pure tailing, this mycorrhiza had the best induction for typha biomass and leaf number. In general, AMF application increased growth of typha grass in tailings media.
Short Communication: New records of aphid species Subfamily Aphidinae (Hemiptera: Aphididae) in West Java, Indonesia YANI MAHARANI; PURNAMA HIDAYAT; AUNU RAUF; NINA MARYANA
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190219

Abstract

Maharani Y, Hidayat P, Rauf A, Maryana N. 2018. Short Communication: New records of aphid species Subfamily Aphidinae (Hemiptera: Aphididae) in West Java, Indonesia. Biodiversitas 19: 510-515. Aphids (Hemiptera: Aphididae) are an economically important group of insects. Their feeding not only damages crops directly but also transmits viruses that cause plant disease. The total number of aphid species recorded in West Java, Indonesia between 1917 and 2013 was 184 species. The aim of the study reported here was to identify and record any aphid species and their host plants in West Java Province, Indonesia that had not previously been recorded. The study was conducted in thirteen districts in West Java. Fourteen species of aphid were newly recorded as found in West Java; five species from the tribe Aphidini, and nine species from the tribe Macrosiphini.
Population and vegetation structure of ramin (Gonystylus bancanus) in secondary forests of Ketapang District, West Kalimantan, Indonesia ABDURRANI MUIN; DWI ASTIANI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190222

Abstract

Muin A, Astiani D. 2018. Population and vegetation structure of ramin (Gonystylus bancanus) in secondary forests of Ketapang District, West Kalimantan, Indonesia. Biodiversitas 19: 528-534. In the tropical peatland, ramin (Gonystylus bancanus Miq. Kurz) was one of many prominent species that present in peatland forest. The species distribution is mostly in Southeast Asia peatland. The beautiful wood color, pale yellow sometimes grayish with no differentiated sapwood and heartwood with straight interlocked grain, made it become the most wanted tree species from tropical peatland.The exploitation of Ramin wood since the 1970s caused the decrease of its population in the peatland forest, led to this species being listed as an endangered species. This study aimed to search information on the Ramin population and vegetation structure left in its habitat in secondary peatland forest of Pematang Gadung and Sungai Sirih villages area of Ketapang District. The study employed a survey method, and data collection was carried out using line plots system. Data assessed were natural regeneration condition-seedling, sapling and pole growth levels-, and tree growth levels. A 20 m x 20 m size plots were continually established to form a line with the length of 550-680 m. Results showed that relatively a few Ramin was found in the forests in Sungai Sirih with a mean seedling density of only 9.9 tree ha-1, height ranges of 131 cm to 150 cm, and counted sapling level of 183 trees ha-1 with diameter ranges from 0.38 to 6.37 cm. At Pematang Gadung village, more Ramin was found, especially with a bigger diameter. Tree level (diameter >20cm) was recorded at 74.1 tree ha-1 with a contradictory far less seedling (2.8 tree ha-1), sapling level (only 1 tree ha-1) and pole level (7.4 tree ha-1) established. Based on the tree population condition and the variation of their growth level, the vegetation structure of Ramin did not describe a normal curve form in the natural forest both in the villages of Pematang Gadung and Sungai Sirih.
Mangrove plants species from Delta Mahakam, Indonesia with antimicrobial potency GINA SAPTIANI; ANDI NOOR ASIKIN; ESTI HANDAYANI HARDI; FIKRI ARDHANI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190220

Abstract

Saptiani G, Asikin AN, Ardhani F, Hardi EH. 2018. Mangrove plants species from Delta Mahakam, Indonesia with antimicrobial potency. Biodiversitas 19: 516-521. This research was aimed to study biodiversity of mangrove that have potential as an antimicrobial material. The leaves of 4 types of mangroves, namely Avicennia marina, Sonneratia alba, Rhizophora stylosa, and Acanthus ilicifolius were chopped, dried and extracted with 3 types of solvents 80% ethanol, water and seawater. The Antimicrobial used Agar Disc Diffusion (ADD) method, and Minimal Inhibitory Concentration (MIC). Microbes that used for the test were Staphylococcus aureus, Escherichia coli, Vibrio harveyi, Aeromonas hydrophila and Saprolegnia sp. The ADD test showed ethanol extract of A. marina and A. ilicifolius can inhibit S. aureus with inhibition zone 13.33±0.58 mm. All the extract can inhibit A. hydrophila 13.00±1.00 mm and E. coli 12.67±0.58 mm. Ethanol extract of S. alba can inhibit V. harveyi 12.67±0.58 mm and A. ilicifolius 12.33±0.58 mm against Saprolegnia sp. The best of MIC is ethanol extract of A. ilicifolius, following A. marina, S. alba and R. stylosa.
Enhancing water levels of degraded, bare, tropical peatland in West Kalimantan, Indonesia: Impacts on CO2 emission from soil respiration DWI ASTIANI; BURHANUDDIN BURHANUDDIN; EVI GUSMAYANTI; TRI WIDIASTUTI; MUHAMMAD J. TAHERZADEH
Biodiversitas Journal of Biological Diversity Vol. 19 No. 2 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190221

Abstract

Astiani D, Burhanuddin, Gusmayanti E, Widiastuti T, Taherzadeh MJ. 2018. Enhancing water levels of degraded, bare, tropical peatland in West Kalimantan, Indonesia: Impacts on CO2 emission from soil respiration. Biodiversitas 19: 522-527. The major drivers of deforestation in West Kalimantan have been the development for large or small-scale expansion of agricultural activities; the establishment of oil palm and other plantations; fire; and degradation of forests particularly from industrial logging. Our previous research findings have shown that such activities in affected peatland areas have lowered the water table levels (down to 0.5-1.0 m depths), and have significantly increased CO2 emissions from the peat soils. It has been demonstrated that unmanaged, lowered water tables in peatlands act as one of the main factors inflating soil carbon emissions - an issue that has assumed global significance in recent decades. Regulating peatland water tables has the potential to mitigate degraded peatland carbon emissions as well as improve the hydrological functions for communities who farm the peatlands. However, we are still uncertain exactly how much impact controlled raising of the peatlands water tables will have on reducing soil CO2 emissions. The research described here aimed to mitigate CO2 emissions by raising and regulating water levels on drained peatland to restore and enhance its hydrological functions. The results confirmed that raising the water table significantly decreases CO2 emissions and improves water availability and management for crop production in the coastal peatland of Kubu Raya district, West Kalimantan. Water levels previously at 60cm below the soil surface were regulated to raise the watertable up to just 30 cm below the surface and this reduced peatland carbon emissions by about 49%. However, longer-term monitoring is required to ensure that the hydrological benefits and CO2 mitigation can be sustained.

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