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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,259 Documents
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Culturable fungal diversity associated with forest leaf litter from Bhandara District of Maharashtra, India SUNIL M. AKARE; WALAY Y. TAGADE; ASHNISH R. WARGHAT; AVILEKH NARYAL; ASHWANI BHARDWAJ
Biodiversitas Journal of Biological Diversity Vol. 17 No. 1 (2016)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d170147

Abstract

Akare SM, Tagade WY, Warghat AR, Naryal A, Bhardwaj A. 2016. Culturable fungal diversity associated with forest leaf litter from Bhandara District of Maharashtra, India. Biodiversitas 17: 349-358. Diversity of leaf litter fungi were carried out in 201011. Four samples were collected from Bampewada and Sakoli forest area of Bhandara District of Maharashtra, India. The Blotter paper method, Segment plate method and Serial dilution methods were used to assess the diversity of fungal species. Fungi were cultivated on potato dextrose agar, malt extract agar and czapek dox agar. A total of 31 species comprising 29 Ascomycetes and two Zygomycetes were recognized from 4 samples collected from Bampewada and Sakoli forest area. The most abundant group was Ascomycetes. The dominant species in both the forests were A. flavus, A. niger, Aureobasidium sp., Fusarium oxysporum, Penicillium sp.1, Rhizopus stolonifer, A. caespitosus, Penicillium sp.2, A. nidulans, Helminthosporium sp. and Monodictys fluctuata. While, common species were A. flavus, A. fumigatus, A. nidulans, A. niger, Beltrania rhombica and Fusarium oxysporum. The fungal diversity was higher in theSakoli forest than that of Bampewada forest. Differences were observed in percentage occurrence of fungal species between two forest areas. The reason may be that the quality of litters, different microenvironments and other characteristics in the Sakoli forest provided more resources for fungi than in Bampewada forest.
Short Communication: Fusarium as endophyte of some terrestrial orchid from Papua, Indonesia SUPENI SUFAATI; VERENA AGUSTINI; SUHARNO SUHARNO
Biodiversitas Journal of Biological Diversity Vol. 17 No. 1 (2016)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d170149

Abstract

Sufaati S, Agustini V, Suharno. 2016. Fusarium as endophyte of some terrestrial orchid from Papua, Indonesia. Biodiversitas 17: xxx. The aim of the study was to identify endophytic fungi associated with the roots of terrestrial orchid Phaius tankervilleae (Banks) Blume, Dendrobium lancifolium A. Rich var. papuanum and Calanthe triplicata (Willem) Ames from Papua, Indonesia. The endophytic fungi were isolated from the transversal section of the orchid roots. Identification of the endophytes was carried out based on the morphological characters. The phylogenetic analysis of nucleotide sequences generated from ITS rDNA region of the endophytic fungi isolated from P. tankervilleae showed that those isolates were determined as Fusarium solani. This is the first report of F. solanifound as endophyte of P. tankervilleae in Papua. While the ITS rDNA of Fusarium isolated from C. triplicata need to be sequenced for further identification.
Short Communication: Rhizoctonia-like fungi isolated from roots of Dendrobium lancifolium var. papuanum and Calanthe triplicata in Papua, Indonesia VERENA AGUSTINI; SUPENI SUFAATI; SUHARNO SUHARNO; NUTTIKA SUWANNASAI
Biodiversitas Journal of Biological Diversity Vol. 17 No. 1 (2016)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d170151

Abstract

Agustini V, Sufaati S, Suharno, Suwannasai N. 2016. Rhizoctonia-like fungi isolated from roots of Dendrobium lancifolium var. papuanum and Calanthe triplicata in Papua, Indonesia. Biodiversitas 17: 377-383. The aim of this study was to isolate and identifyRhizoctonia-like fungi associated with the roots of the terrestrial orchids Dendrobium lancifolium A. Rich var. papuanum and Calanthe triplicata (Willem) Ames in Papua. The fungi were isolated from the transversal section of the orchid roots. Two isolates have been morphologically identified as genus Rhizoctonia. Further identification was carried out based on the analysis of nucleotide sequences generated from ITS and 28S rDNA. The results revealed that both isolates closed to Ceratobasidium sp. and the phylogenetic analysis confirmed that they were determined as Rhizoctonia-like fungi.
Species diversity of critically endangered pristid sawfishes (Elasmobranchii: Pristidae) Elasmobranchii: Pristidae (Malay Archipelago) SUTARNO SUTARNO; AHMAD SETYAWAN; IWAN SUYATNA
Biodiversitas Journal of Biological Diversity Vol. 13 No. 4 (2012)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d130401

Abstract

Sutarno, Setyawan AD, Suyatna I. 2012. Species diversity of critically endangered pristid sawfishes (Elasmobranchii: Pristidae) Elasmobranchii: Pristidae (Malay Archipelago). Biodiversitas 13: 161-171. The pristid sawfishes (Pristidae) are notable because of their sawlike rostrum and large body size (up to seven meters). All pristids are listed as critically endangered by IUCN, since decreasingpopulation; Nusantara is home for five pristid species, namely: Anoxypristis cuspidata Latham, 1794, Pristis clavata Garman, 1906, Pristis microdon Latham, 1794, Pristis zijsron Bleeker, 1851, and Pristis pectinata Latham, 1794. A. cuspidata differ from Pristid spp. by the presence of a very narrow rostral saw, with 16 to 29 pairs of teeth except for the part along the quarter of the rostral saw near the head. P. microdon has a highly defined groove that runs along the entire posterior edge of the tooth into and beyond its confluence with the rostrum. This groove is absent in juvenile of P. clavata and whilst it develops in larger individuals it rarely runs along the entire posterior edge of the tooth or reach its confluence with the rostrum. P. clavata possibly have been misidentified as P. pectinata, whose distribution in the Indo-West Pacific is uncertain. P. clavata can be distinguished from P. pectinata and P. zijsron by the possession of fewer rostral teeth (18 to 22 in P. clavata cf. 24 to 28 in P. zijsron and 24 to 34 in P. pectinata), and by its smaller body size (i.e. less than 250 cm TL in P. clavata). P. microdon indicates different sexes of the number of rostral teeth, i.e. 17-21 in female cf. 19-23 in male, but in P. clavata, it can not be used to differentiate male from female, with both sexes possessing an average of 42 rostral teeth. In P. clavata the dorsal fin origin is opposite or slightly behind the pelvic fin origin, the rostum is relatively shorter (22-24% of TL), he lower cauda fin lobe is smaller.
Species diversity of Rhizophora in Tambelan Islands, Natuna Sea, Indonesia AHMAD DWI SETYAWAN; YAYA IHYA ULUMUDDIN
Biodiversitas Journal of Biological Diversity Vol. 13 No. 4 (2012)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d130402

Abstract

Setyawan AD, Ulumuddin YI. 2012. Species diversity of Rhizophora in Tambelan Islands, Natuna Sea, Indonesia. Biodiversitas 13:172177. Research on diversity and distribution of mangroves on the small remote islands are rarely performed than on the coastal area and estuaries. Tambelan Islands is a cluster of small islands isolated in the Natuna Sea, Indonesia. On the island there are four species of Rhizophora, namely R. apiculata, R. stylosa, R. mucronata, and hybrid species R. x lamarckii. Rhizophora stylosa and R. apiculata are the most common species found. R. mucronata only found in certain places (i.e. Durian River), R. x lamarckii rare, usually grows in stands that also covered by the two parental, R. stylosa and R. apiculata. All Rhizophora species were found to have thorn on the leaf tip, and spotted brown on the underneath leaf. R. apiculata has a petal without woolly feathers, inflorescence have short stalks and cork. R. stylosa and R. mucronata are sibling species, both of them have a long-stalks and dichotomy inflorescence, but the style of R. mucronata very short (<2.5 mm), whereas in R. stylosa longer (> 2.5 mm). R. x lamarckii has characters between R. apiculata and R. stylosa.
Impact of forest disturbance on the structure and composition of vegetation in tropical rainforest of Central Sulawesi, Indonesia RAMADHANIL PITOPANG
Biodiversitas Journal of Biological Diversity Vol. 13 No. 4 (2012)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d130403

Abstract

Pitopang R. 2012. Impact of forest disturbance on the structure and composition of vegetation in tropical rainforest of Central Sulawesi, Indonesia. Biodiversitas 13: 178-189. We presented the structure and composition of vegetation in four (4) different land use types namely undisturbed primary forest, lightly disturbed primary forest, selectively logged forest, and cacao forest garden in tropical rainforest margin of the Lore Lindu National Park, Central Sulawesi Indonesia. Individually all big trees (dbh > 10 cm) was numbered with tree tags and their position in the plot mapped, crown diameter and dbh measured, whereas trunk as well as total height measured by Vertex. Additionally, overstorey plants (dbh 2- 9.9 cm) were also surveyed in all land use types. Identification of vouchers and additional herbarium specimens was done in the field as well as at Herbarium Celebense (CEB), Tadulako University, and Nationaal Herbarium of Netherland (L) Leiden branch, the Netherland. The result showed that the structure and composition of vegetation in studied are was different. Tree species richness was decreased from primary undisturbed forest to cacao plantation, whereas tree diversity and its composition were significantly different among four (4) land use types. Palaquium obovatum, Chionanthus laxiflorus, Castanopsis acuminatissima, Lithocarpus celebicus, Canarium hirsutum, Euonymus acuminifolius and Sarcosperma paniculatum being predominant in land use type A, B and C and Coffea robusta, Theobroma cacao, Erythrina subumbrans, Gliricidia sepium, Arenga pinnata, and Syzygium aromaticum in the cacao plantation. At the family level, undisturbed natural forest was dominated by Fagaceae and Sapotaceae disturbed forest by Moraceae, Sapotaceae, Rubiaceae, and agroforestry systems by Sterculiaceae and Fabaceae.
Diversity of Selaginella across altitudinal gradient of the tropical region AHMAD DWI SETYAWAN; JATNA SUPRIATNA; DEDY DARNAEDI; ROKHMATULOH ROKHMATULOH; SUTARNO SUTARNO; SUGIYARTO SUGIYARTO
Biodiversitas Journal of Biological Diversity Vol. 17 No. 1 (2016)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d170152

Abstract

Setyawan AD, Supriatna J, Darnaedi D, Rokhmatuloh, Sutarno, Sugiyarto. 2016. Diversity of Selaginella across altitudinal gradient of the tropical region. Biodiversitas 17: 384-400. Selaginella prefers moist environment for its growth and requires water for fertilization; therefore it is often found flourish in plateau and hilly mountains with high rainfall. The aim of this research was to know species diversity of Selaginella along altitudinal gradient in the southern part of Java, Indonesia. The research was conducted between July 2007 and January 2014across the altitudinal region of Java, Indonesia, which includes the districts of Wonosobo, Purworejo, Kebumen, Banjarnegara and its border areas, with altitudes between 0 and 2500 m. asl. The research found 12 selaginellas species, 10 species collected from field research, namely: S. aristata, S. ciliaris, S. intermedia, S. involvens, S. opaca, S. ornata, S. plana, S. repanda, S. remotifolia, and S. uncinata; and two species only known from herbarium collection of Herbarium Bogoriense (BO), namely S. singalanensis and S. willdenowii. This research was the first publication of the Selaginella flora along altitudinal gradient from the coastal area to the high mountains of Central Java, Indonesia.
Population dynamics of dominant demersal fishes caught in Tambelan Islands waters, Riau Archipelago Province YOVITNER phdmrk@gmail.com; FAHMI FAHMI
Biodiversitas Journal of Biological Diversity Vol. 13 No. 4 (2012)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d130405

Abstract

Yonvitner, Fahmi. 2012. Population dynamics of dominant demersal fishes caught in Tambelan Islands waters, Riau Archipelago Province. Biodiversitas 14: 200-204. The population of demersal fishes tends to be decline in the last few decades. The decline was due to the increased of intensive catches, fishing effort and illegal fishing practices. This study aimed to examine aspects of population dynamics such as mortality, recruitment, opportunity capture and population estimation. The study was conducted in six locations at Tambelan waters, on 4-16 November 2010. Collected data included the fish species, size and biomass catch. The analyses performed included mortality, recruitment, opportunity capture and population estimates (VPA). The data indicated that the Genus of Nemipterus and Lutjanus possess the highest total mortality rate that was respectively 1.62 and 2.55. The highest recruitment presentation of the population which has an annual period as Pentapodus was 16%. Catch opportunities tend to be higher than actual fishing, while the alleged biomass of steady state conditions reached 12.2 tons/yr.
Plants and animals diversity in Buqaty Mountain Area (BMA) in Hamadan Province, Iran MAHDI REYAHI-KHORAM; MAJEED JAFARY; MOSTAFA BAYATI; REIHANEH REYAHI-KHORAM
Biodiversitas Journal of Biological Diversity Vol. 13 No. 4 (2012)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d130404

Abstract

Reyahi-Khoram M, Jafary M, Bayati M, Reyahi-Khoram R. 2012. Plants and animals diversity in Buqaty Mountain Area (BMA) in Hamadan Province, Iran. Biodiversitas 14: 190-194. Buqaty Mountain Area (BMA) is regarded as one of the genetic reserves of Hamadan province in Iran. BMA is highly important regarding variety of plant and animal species, but limited research work has been performed in this area in the field of biodiversity. Identifying the unique ecologic talents and capabilities and aesthetics of BMA is the most important objective of this study. This research was conducted during 2010 through 2011 in BMA to identify various plant and animal species through documentary and also direct field observations. With direct referring to the various regions of the studied area, plant samples were collected from different slope position and transported to field laboratory units. Sampling was made for every 20 meters increase in the height of area. Animal species of the area were identified too. Based on the results, about 44 valuable plant species, 45 species of birds as well as 7 species of mammals have been identified in BMA. It is recommended that the area be declared an A prohibited hunting area by Department of Environment (DoE) of Iran for the conservation of flora and fauna in the study area.
The population of Jernang rattan (Daemonorops draco) in Jebak Village, Batanghari District, Jambi Province, Indonesia IIK SRI SULASMI; NISYAWATI NISYAWATI; YOHANES PURWANTO; SITI FATIMAH
Biodiversitas Journal of Biological Diversity Vol. 13 No. 4 (2012)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d130406

Abstract

Sulasmi IS, Nisyawati, Purwanto Y, Fatimah S. 2012. The population of Jernang rattan (Daemonorops draco)  in Jebak Village, Batanghari District, Jambi Province, Indonesia. Biodiversitas 13: 205-213. Research of Rattan Jernang ((Daemonorops draco Willd.) population in Jebak Village, Batanghari District, Jambi had never been done before. Daemonorops draco is a plant that produces sap called dragon blood. Dragon blood is very useful for the the lives of people of Anak Dalam Tribe in Jambi. This research used purposive random sampling method. All of data were analyzed descriptively. The results showed that beside D. draco, there were other six species of rattan in Jebak forest. The population of D. draco in Jebak forest was only 8 clumps, consisting of 82 individuals. D. draco had the smallest population among all rattan species. Calamus javensis had the highest population, namely 11 clumps, consisting of 197 individuals. The research location had air temperature of 20.2 oC-28.9 oC, relative humidity of 58%-68%, and pH of 4.60-4.81. In this location, there were 35 tree species (73 individuals)  as supporting trees for D. draco to climb. The number of D. draco’s supporting trees and D. draco was not balanced, causing the death of D. draco in Jebak forest. Vegetation analyses showed that there were 51 tree species with diameter > 10 cm, consisting of 69 individuals. Pithecolobium saman had the highest importance value index (11) among all trees. There were also 33 tree species with diameter < 10 cm, consisting of 60 individuals. Pithecolobium saman also had the highest importance value index (20) in this group. Based on the interview, it is showed that the population of D. draco in Jebak forest declined because of illegal logging and forest encroachment.

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