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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
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Phenotypic characters and genetic variations of lurik peanuts (Arachis hypogaea L. var. lurikensis) with Inter Simple Sequence Repeat Ikhsanudin Nur Rosyidi -; Budi Setiadi Daryono
Biodiversitas Journal of Biological Diversity Vol. 21 No. 2 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210227

Abstract

Abstract. Rosyidi IN, Daryono BS. 2020. Phenotypic characters and genetic variations of lurik peanuts (Arachis hypogaea L. var. lurikensis) with Inter Simple Sequence Repeat. Biodiversitas 21: 629-635. Agriculture is a sector that supports national development, one of its commodities is peanut (Arachis hypogaea L.). The needs and demand for peanuts from the food industry sector increased throughout time. However, the current national production level is unable to fulfill the demand, so the number of peanut imports increased sharply.  Based on this condition, researches to improve peanuts production using Lurik peanuts should be held as a solution to fulfill the need for national consumption because lurik peanuts have a greater number of pods and seeds. This research was aimed to improve the quality and quantity of Lurik peanuts phenotype and analyze the successes through the variations and its molecular character. This research was done in May - July 2018 in Mutihan, Madurejo, Prambanan, Sleman, Yogyakarta and in the Laboratory of Genetics and Breeding of Faculty of Biology, Universitas Gadjah Mada (UGM), Yogyakarta, Indonesia. In this research, Lurik peanuts improvement was conducted by selection and induction with colchicine. The Data was collected qualitatively using Inter Simple Sequence Repeat (ISSR) with  ISSR 8, ISSR 9, UBC 825, UBC 841 primers and electrophoresis while the quantitative method was done using plant phenotype measurement and spectrophotometry, then followed by data analysis using one-way ANOVA and MVSP 3.1 program. The results of this research showed that the characters of Lurik peanuts were different from common peanuts such as in having higher plants, different numbers of seeds per pod, and pattern on the seed coat. These data were supported by the molecular results, with similarity index at 84% meaning that the Lurik peanuts and common peanuts are classified as one same species.
Abundance, prey, and activity period of dholes (Cuon alpinus) in Khao Yai National Park, Thailand NORASET KHOEWSREE; KHWANRUTAI CHARASPET; ronglarp - sukmasuang; NUCHARIN SONGSASEN; MANANYA PLA-ARD; JIDAPA THONGBANTUM; WARAPORN KONGCHALOEM; KHANCHIT SRINOPAWAN
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210142

Abstract

Abstract. Khoewsree N, Charaspet K, Sukmasuang R, Songsasen N, Pla-ard M, Thongbantum J, Kongchaloem W, Srinopawan K. 2020. Abundance, prey, and activity period of dholes (Cuon alpinus) in Khao Yai National Park, Thailand. Biodiversitas 21: 345-354. The abundance and occupancy of dholes in Khao Yai National Park are the highest among found carnivorous mammals. This demonstrates the importance of the home range of dholes. From the scat analysis, eight species of mammals that are prey can be identified. The dholes mainly consume ungulates when considering the most percentage of relative biomass consumed were ungulate species. For the number of prey animals consumed by dholes per year, a dhole consumes 25.94 prey animals per year which consist of 6.51 masked palm civets, 6.44 Asian palm civets, 4.55 muntjac, 3.97 lesser mouse-deer, 2.22 large Indian civets, 1.03 wild boars, 0.66 sambar, and 0.56 porcupines. From the daily activity pattern captured by the camera trap, dholes have an average activity period of 14:49 hours. Therefore, they are mostly diurnal. The results of the study confirm that Khao Yai National Park is an important habitat of dholes. To maintain the population of dholes in the area, the most important factor is maintaining the ungulate population in the area, especially muntjac, sambar, lesser mouse-deer, and wild boar by increasing and improving the quality of grassland, austerity of maintenance, garbage and dirt disposal from tourism activities in the area for ecological health, and public relations for dholes’ conservation in the long-term.
Short Communication: Mangrove forest management based on multi dimension scalling (RAP-Mforest) in Kwandang Sub-district, North Gorontalo District, Indonesia Ramla Hartini Melo; Cecep Kusmana; Eriyatno Eriyatno; Dodik Ridho Nurrochmat
Biodiversitas Journal of Biological Diversity Vol. 21 No. 4 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210411

Abstract

Abstract. Melo RH, Kusmana C, Eriyatno, Nurrochmat DR. 2020. Short Communication: Mangrove forest management based on multi-dimension scalling (RAP-Mforest) in Kwandang Sub-district, North Gorontalo District, Indonesia. Biodiversitas 21: 1352-1357. Management of mangrove forests is an important aspect in the effort to conserve the environment in coastal areas. Its management requires planning to ensure the sustainability of its function and benefit. This study aimed to analyze the sustainability level of the mangrove forest management in Kwandang Sub-district, North Gorontalo District, Gorontalo Province, Indonesia and to determine the factors that affected that sustainability. Data were collected through field measurement and interviews, and then analyzed using Rapid Appraisal of Mangrove Forest (Rap-Mforest) approach and Monte Carlo analysis. The results showed that mangrove management was fairly sustainable on the ecological criteria (60.43%), but less sustainable on the economic criteria (47.79%) and social criteria (42.22%). The result of leverage analysis indicated that 6 out of 20 indicators were categorized as sensitive indicators affecting the sustainability of mangrove management. These sensitive indicators should be given priority in increasing the sustainability index in the future.
Fish species, traders, and trade in traditional market: Case study in Pasar Baru, Balikpapan City, East Kalimantan, Indonesia RAHMAN LATIF ALFIAN; JOHAN ISKANDAR; BUDIAWATI SUPANGKAT ISKANDAR; SUROSO; DICKY P. ERMANDARA; DEDE MULYANTO; Ruhyat Partasasmita
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210146

Abstract

Abstract. Alfian RL, Iskandar J, Iskandar BS, Suroso, Ermandara DP, Mulyanto D, Partasasmita R. 2020. Fish species, traders, and trade in traditional market: Case study in Pasar Baru, Balikpapan City, East Kalimantan, Indonesia. Biodiversitas 21: 393-406. The purpose of this study is to analyze the species of fish traded by fish traders in the Pasar Baru traditional market, Balikpapan, East Kalimantan. In addition, this study analyses the Traditional Ecological Knowledge (TEK) of fish traders on fishes, including naming fish, fish habitat and caught technique, sex differentiate, taste of fish, price of fish, origin of fish and processing, freshness of fish and preservation, and the transmission of knowledge and conservation of the fish species. This study used qualitative methods that ethnoichthyology approach was used, with some field technics, namely observation, depth interview, and survey of species of fish were applied. The results showed that there were 36 species, representing 22 families recorded in the traditional market of Pasar Baru. Fish traders have good knowledge on fishes, including naming fish, sex differentiate, fish caught, freshness of fish, and how to preserve fish. Traders often offer fish to buyers by mentioning the names and various aspects of fish species, so the traders have indirectly introduced and socialized the TEK of fish species to buyers and a wider community. In addition, since the high diversity of fish species has normally traded in the traditional market, it has an important function not only for the community's economy, but also have an important function for the conservation of biodiversity of fish species in the region.
Cranefly fauna (Diptera: Limoniidae, Pediciidae, Tipulidae) of the Republic of Mordovia, Russia Valentin Pilipenko; ALEXANDER B. RUCHIN; GENNADY B. SEMISHIN
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210143

Abstract

Abstract. Pilipenko VE, Ruchin AB, Semishin GB. 2020. Cranefly fauna (Diptera: Limoniidae, Pediciidae, Tipulidae) of the Republic of Mordovia, Russia. Biodiversitas 21: 355-369. The paper summarizes the Tipuloidea fauna of the Republic of Mordovia, Russia, for the first time. Among the 94 species, 29 species of Limoniidae and 14 species of Tipulidae have not been previously recorded from the region. The family Pediciidae, with five species, is also recorded for the first time. Six species are recorded from ?entral European Russia for the first time: Hexatoma (Hexatoma) fuscipennis (Curtis, 1836), Phylidorea (Phylidorea) bicolor (Meigen, 1804), Dicranomyia (Dicranomyia) omissinervis de Meijere, 1918, Limonia macrostigma (Schummel, 1829), Tricyphona (Tricyphona) unicolor (Schummel, 1829), and Ula (Ula) bolitophila Loew, 1869.
Short communication: The crustaceans fauna from Natuna Islands (Indonesia) using three different sampling methods Rianta Pratiwi; DEWI ELFIDASARI
Biodiversitas Journal of Biological Diversity Vol. 21 No. 3 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210349

Abstract

Abstract. Pratiwi R, Elfidasari D. 2020. Short communication: The crustaceans fauna from Natuna Islands (Indonesia) using three different sampling methods. Biodiversitas 21: 1215-1226. Research on crustacean fauna has been carried out in Natuna waters. Natuna is the outer islands of Indonesia which is still very abundant in fisheries resources including crustaceans. Unfortunately, research on crustaceans is rarely carried out there, especially on the islands around Natuna. Therefore research and information about fisheries, especially crustaceans are needed. The study was conducted on 12-29 April 2011 and sampling locations around the Bunguran Islands, Sedanu, Kognang, Batang, and Sebangmawang. The sampling collection was focused on three different sampling methods, namely: bottom trawling, transects, and free collection. The purpose of this study is to find out which method is best used in crustacean fauna research and it is expected that the crustacean data obtained can add information about crustacean fauna found in the Natuna Islands. Crustacean fauna, which were collected, showed that species from basic trawlers numbered 66 species, 41 species were from transects and 101 species was from free collections. The total number of individuals from the bottom trawl were 746, from the transect were 65 and from the free collection were 704. From the results of the study using three different methods have advantages and disadvantages of each method. The best method used is the free collection method and bottom trawling, because it can collect many crustacean species.
The detection of plantaricin-encoding genes and their amino acid profiles in Lactobacillus plantarum AKK30 isolated from Indonesian native chicken ELISABETH LOVIAN ULI BASA; Abinawanto Abinawanto; A. SOPHIAN; H. JULENDRA; A. SOFYAN
Biodiversitas Journal of Biological Diversity Vol. 21 No. 12 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d211241

Abstract

Abstract. Elisabeth LUB, Abinawanto, Sophian A, Julendra H, Sofyan A. 2020. The detection of plantaricin-encoding genes and amino acid profile in Lactobacillus plantarum AKK30 isolated from Indonesian native chicken. Biodiversitas 21: 5792-5799. Plantaricin-encoding genes of lactic acid bacteria (LAB) Lactobacillus plantarum AKK30 which was isolated from Indonesian native chicken has been characterized using DNA sequencing technology. In order to substitute antibiotics for chickens and enhance probiotics in their gut, characterization of the indigenous probiotics in the chicken should be conducted. A potential probiotic in native chicken gut is Lactobacillus plantarum AKK30. Genes that harbor the bacteriocin biosynthesis of the strain were reported for the first time. The bacterium has diverse plantaricin genes, i.e., plnA, plnEF, plnJ, plnK and plnO. According to the dendrogram, the five plantaricin genes were closely related to plnA, plnE, plnF, plnJ, plnK and plnO genes from L. plantarum WCFS1, L. plantarum C11, and L. plantarum V90. Intriguingly, besides various plantaricin-encoding genes, another important probiotic property in L. plantarum AKK30 is cholesterol-lowering activity. Amino acid profiling also indicated proteolysis activity and probiotic potential, for instance, GABA production. Thus, L. plantarum AKK30 may be added in chicken broiler’s diet to provide probiotic benefits.
Diversity of black pepper plant (Piper nigrum) in Bangka Island (Indonesia) based on agro-morphological characters Gigih Ibnu Prayoga; Ropalia Ropalia; Sitti Nurul Aini; Eries Dyah Mustikarini; Yuniar Rosalin
Biodiversitas Journal of Biological Diversity Vol. 21 No. 2 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210230

Abstract

Abstract. Prayoga GP, Aini SN, Mustikarini, ED, Rosalin Y. 2020. Diversity of black pepper plant (Piper nigrum L.) in Bangka Island (Indonesia) based on agro-morphological characters. Biodiversitas 21: 652-660. Black pepper (Piper nigrum L.) production in Bangka Belitung Islands Province continued to decrease in 2014-2017. Efforts to increase black pepper production was carried out by providing superior varieties that began with an increase in the genetic diversity of black pepper plants. Increasing the genetic diversity of black pepper can be done through black pepper germplasm exploration activities followed by characterization. The research aimed to obtain the agro-morphological characteristics of black pepper plants in Bangka island. Exploration was carried out by survey method in four regencies in Bangka Island. The research method used a survey method with convenience sampling technique. Observation of agro-morphological characters was carried out in accordance with the descriptor for black pepper from IPGRI (1995). The results of exploration of black pepper plants in Bangka Island have found 9 accessions of black pepper plants, consisting of 5 cultivars were Lampung Daun Lebar (LDL), Lampung Daun Kecil (LDK), Chunuk, and Jambi and 4 landraces namely Bogor, Peremis, Keriwil, and Merapin Daun Kecil (MDK). There were morphological differences in 9 accessions of black pepper plants, namely leaf lamina shape, leaf vein, leaf margin, lateral branch habit, leaf base shape, ripe fruit color, hanging vines, ground vines, and stem shape. Agro-morphological relationship of 9 accessions of black pepper plants can be divided into 5 clusters at a 50% similarity level. Based on this study, black pepper breeding program on Bangka Island could be done accessions of Peremis, Bogor, Nyelungkup, and Jambi as genetic sources. Furthermore, selection would be better to use length of petiole, length of stem segment, fruit size, percentage of perfect fruit, weight of 1000 fruits, and the weight of 1000 dried seeds as the selection criteria.
Evaluation of conservation and trade status of marine ornamental fish harvested from Pangandaran Coastal Waters, West Java, Indonesia Agus Nuryanto; DIAN BHAGAWATI; KUSBIYANTO
Biodiversitas Journal of Biological Diversity Vol. 21 No. 2 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210212

Abstract

Abstract. Nuryanto A, Bhagawati D, Kusbiyanto. 2020. Evaluation of conservation and trade status of marine ornamental fish harvested from Pangandaran Coastal Waters, West Java, Indonesia. Biodiversitas 21: 512-520. Pangandaran coastal waters are among the main supply areas of marine ornamental fish in Indonesia. However, no scientific data are available on the conservation and trade status of marine ornamental fish harvested in this region. This study aimed to evaluate the diversity, conservation, and trade status of marine ornamental fish species harvested from Pangandaran coastal waters. Fish were collected during surveys conducted in March, April, July, and September 2019. Species were identified by referring to the available guidance books. The conservation status was analyzed according to the IUCN database, whereas the trade status was evaluated based on the CITES database. A total of 107 marine ornamental fish species from 32 families and eight orders was obtained. The two out of these 107 species had an unresolved conservation status, whereas 24 species were listed as Not Evaluated, 80 species were listed as Least Concern, and one species was listed as Vulnerable by IUCN. Two species had an unknown trade status, whereas 104 species were listed as Not Evaluated and one species was listed in Appendix II of CITES. Our data prove that Pangandaran coastal waters have a high potential for supplying marine ornamental fish, with most of the species listed as having a Not Evaluated or Least Concern status. Most of the species identified were also categorized as having a Not Evaluated trade status.
Short Communication; Medicinal plants in Ubud Monkey Forest in Bali, Indonesia: Diversity, distribution, traditional use and tourism attractiveness Nyoman Wijana; putuindah rahmawati
Biodiversitas Journal of Biological Diversity Vol. 21 No. 6 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210617

Abstract

Abstract. Wijana N, Rahmawati PW. 2020. Short Communication; Medicinal plants in Ubud Monkey Forest in Bali, Indonesia: Diversity, distribution, traditional use and tourism attractiveness. Biodiversitas 21: 2455-2461. The present study attempts to survey and document the medicinal plant diversity found in Ubud Monkey Forest in Bali, Indonesia. The study covers three aspects, namely: ecosystems (vegetation), socio-systems (social) and cultural systems. The population from ecosystem aspects are all plant species that grow in the Ubud?? Monkey Forest. Numerous surveys were conducted to study the distribution pattern of medicinal plants. The purposive samples were used from the aspect of the socio-system, including: community leaders, stakeholders, traditional healers and local community with a total sample of 50 people. The cultural system discussed in this research is Balinese culture. The present study concluded that 28 species of medicinal plants in the Ubud Monkey forest that can be used for traditional medication; medicinal plants in the Monkey Forest are spread in the forest area; these species can be used for internal and external medicine; and various parts of medicinal plant species used for medication are parts of leaves, flowers, fruit, seeds, stems, and roots. The availability of these medicinal plants in Ubud Monkey Forest can be used as an additional attraction for visitors, i.e., for educational tours for students as well as for health and wellness tourism.

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