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Biodiversitas Journal of Biological Diversity
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Articles 6,315 Documents
Bacterial vaginosis pattern and antibiotic susceptibility testing in female patients using high vaginal swabs ISRAA ABDUL AMEER AL-KRAETY; SDDIQ GHANI AL-MUHANNA; SHAIMA RABEA BANOON; ABDOLMAJID GHASEMIAN
Biodiversitas Journal of Biological Diversity Vol. 23 No. 6 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230608

Abstract

Abstract. Al-Kraety IAA, Al-Muhanna SG, Banoon SR, Ghasemian A. 2022. Bacterial vaginosis pattern and antibiotic susceptibility testing in female patients using high vaginal swabs. Biodiversitas 23: 2838-2844. Bacterial species found in the vaginal environment encompass a wide variety of species. A common cause of vaginal discharge in women is bacterial vaginosis BV (BV). Various Gram-positive and Gram-negative rod shaped bacteria, including E. coli, Klebsiella spp., Enterococcus spp., Enterobacter spp., Raoultella ornithinolytica, and Staphylococcus spp. contribute significantly to bacterial vaginosis. In this study, vaginal swabs (VS) were obtained from 50 individuals with symptoms of vaginal discharge. The swabs were inoculated on blood, Mannitol, and MacConkey agar culture media. Biochemical tests were performed after an overnight incubation period to determine growth and colonial morphology. In addition to VITEK® 2 compact system and PCR technique by using a 16s RNA gene where all bacteria isolates were positive for this gene. Antibiotic sensitivity was investigated through compact VITEK® 2 and sensitivity cards (AST-P580), (AST-N222), and (AST-GN76). The bacterial isolates including 20 (43.4%) of E. coli, 8 (17.3%) of Klebsiella spp. and 8 (17.3%) of Staphylococcus spp. were investigated in present study. Additionally, 4 (8.6%) isolates of Enterobacter spp., 3 (6.5%) of E. faecalis, and 3 (6.5%) of R. ornithinolytica. The E. coli, Staphylococcus spp., Enterobacter spp., E. faecalis and R. ornithinolytica isolates were found resistant to several antibiotics and considered multi-resistance (MDR).
Short Communication: The effects of SO2 and NO2 fumigation on the chlorophyll of Parmotrema perlatum from Mt. Lawu, Cemoro Sewu, Indonesia EFRI ROZIATY; SUTARNO SUTARNO; SUNTORO SUNTORO; SUGIYARTO SUGIYARTO
Biodiversitas Journal of Biological Diversity Vol. 24 No. 5 (2023)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d240515

Abstract

Abstract. Roziaty E, Sutarno, Suntoro, Sugiyarto. 2023. Short Communication: The effects of SO2 and NO2 fumigation on the chlorophyll of Parmotrema perlatum from Mt. Lawu, Cemoro Sewu, Indonesia. Biodiversitas 24: 2630-2637. Lichens are symbiotic organisms composed of algae and fungi. Lichens have long been recognized as bioindicators of environmental health. One of the lichen parts that will be affected by pollution is chlorophyll. The lichen thallus was fumigated with the gases from motor vehicle emissions. The lichens under study were Parmotrema perlatum (Huds.) M. Choisy, found in Cemoro Sewu Forest, Magetan, East Java. The categorization of vehicle emission exposure levels includes Level 0 (no fumigation, control group), Level 1 (1.5 hours), Level 2 (3 hours), Level 3 (4.5 hours), Level 4 (6 hours), Level 5 (7.5 hours) and Level 6 (9 hours). The fumigated thallus had already been examined with spectrophotometry. Sulfuric dioxide (SO2) was measured at 324 nm and 328 nm, whereas nitrogen dioxide and chlorophyll were measured at 645 nm and 663 nm. Each test was replicated three times (R1, R2, and R3). Level 6 had the highest NO2 and SO2 content. The highest NO2 content on thallus lichens was 4.00 at Level 6, while the lowest was 2.14 at Level 0 (Control). The highest SO2 content was 1.856 at Level 6, whereas the lowest was 0.231 at Level 0 (Control). The highest chlorophyll content of Parmotrema was found at Level 0, while the lowest was identified at Level 6 (0.245 µg ml-1). The highest content of chlorophyll b was 0.659 (Level 4), while the lowest was Level 6 (0.413 µg ml-1). The thallus Parmotrema responded positively to NO2 and SO2 exposure. Correlation tests between the four components, specifically fumigation, NO2, SO2, and chlorophyll, show a positive correlation between pollutants and chlorophyll.
Quality and storage time of traditional dangke cheese inoculated with indigenous lactic acid bacteria isolated from Enrekang District, South Sulawesi, Indonesia MUHAMMAD ASKARI x MUHAMMAD ASKARI ZAKARIAH; RATMAWATI MALAKA; AMRAN LAGA; AMBO AKO; MUHAMMAD ZAKARIAH; FAILAL ULFI MAULIAH
Biodiversitas Journal of Biological Diversity Vol. 23 No. 6 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230656

Abstract

Abstract. Zakariah MA, Malaka R, Laga A, Ako A, Zakariah M, Mauliah FU. 2022. Quality and storage time of traditional dangke cheese inoculated with indigenous lactic acid bacteria isolated from Enrekang District, South Sulawesi, Indonesia. Biodiversitas 23: 3270-3276. Dangke is a traditional cheese from Enrekang District. Many research on the isolation of lactic acid bacteria (LAB) from dangke has been done without knowing the type of LAB species. This study aimed to find out the type of LAB species that have been successfully isolated and applied to dangke again. The design of this study was conducted in two stages: 1) isolated LAB species were identified by 16S rRNA sequencing; 2) effect of inoculated LAB on the quality and storage time of traditional dangke cheese. The molecular results showed that LAB from dangke included Streptococcus lutetiensis, Weissella confusa and Streptococcus equinus. Isolates type and ripening time have affected pH, organic matter, and dangke crude fat. The type of isolate can partially affect the dry matter content, and dangke crude protein. Weissella confusa can improve the quality of dangke with a ripening time of 6 days and a storage time of 3 days.
Cytogenetic study of five species of medicinal plants from Maha Sarakham Province, Thailand PIYAPORN SAENSOUK; NATKAMON SAEN-IN; SURAPON SAENSOUK
Biodiversitas Journal of Biological Diversity Vol. 23 No. 7 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230736

Abstract

Abstract. Saensouk S, Saen-in N, Saensouk P. 2022. Cytogenetic study of five species of medicinal plants from Maha Sarakham Province, Thailand. Biodiversitas 23: 3593-3603. The cytogenetic study of five species of medicinal plants, namely Butomopsis latifolia (D. Don) Kunth, Iris domestica (L.) Goldblatt & Mabb., Limnocharis flava (L.) Buchenau, Murdannia loriformis (Hassk.) R.S. Rao & Kammathy, and Pontederia hastata L. from Maha Sarakham Province, northeastern Thailand was conducted. This study aimed to investigate the chromosome numbers, fundamental number (NF), karyotype forms, and perform ideogram analysis of the five species. The cytogenetic characteristics, including the chromosome number, karyology (fundamental number (NF), karyotype formula), symmetrical karyotype, chromosome size, relative length (RL), centromeric indexes (CI), and ideograms of B. latifolia (D. Don) Kunthwere studied for the first time. The chromosome numbers of five medicinal plant species were reported as 2n = 14 (B. latifolia (D. Don) Kunth)- 80 (I. domestica (L.) Goldblatt & Mabb.). Moreover, the NF had 28 (B. latifolia (D. Don) Kunth) - 80 (Iris domestica). Two species (M. loriformis(Hassk.) R.S. Rao & Kammathyand P. hastata L.) were recognized as having symmetrical karyotypes. Three species, namely B. latifolia (D. Don) Kunth, Iris domestica, and L. flava(L.) Buchenau were reported as having asymmetrical karyotypes. Chromosomes of large size (L), chromosomes of medium size (M), and chromosomes of small size (S) were observed. Ideograms of five species were provided in this study. The NF, RL, CI, chromosome size, and ideograms of all species were reported for the first time in this study. The karyotype formulae of the five species, except the karyotype formula of P. hastata L., differed from those previously studied. The cytogenetic data of the five species in this study can be used for identification.
Short Communication: Agronomical characteristics of sweet corn under different plant growth regulators during the dry season SYARIFUL MUBAROK; FIKY YULIANTO WICAKSONO; ANNE NURAINI; BAYU PRADANA NUR RAHMAT; RAHMAT BUDIARTO
Biodiversitas Journal of Biological Diversity Vol. 23 No. 6 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230636

Abstract

Abstract. Mubarok S, Wicaksono FY, Nuraini A, Rahmat BPN, Budiarto R. 2022.S hort Communication: Agronomical characteristics of sweet corn under different plant growth regulators during the dry season. Biodiversitas 23: 3091-3098. Sweet corn (Zea mays convar. saccharata var. rugosa)is one of the important horticultural crops. Increasing sweet corn production during the dry season can be achieved by applying plant growth regulators (PGR). PGRs such as auxin, gibberellin, cytokinin, ethylene, and other phytohormones control various physiological and chemical processes in plants. The PGR is often used for the engineering process of plant cultivation technology, especially during environmental stress conditions. This study aimed to determine the effect of PGRs (auxin, gibberellic acid, salicylic acid, and paclobutrazol) on sweet corn growth and yield during the dry season. The results showed that the application of PGR significantly affected sweet corn growth, yield, and yield quality during the dry season. The auxin significantly increased plant height and leaf length, whereas paclobutrazol and salicylic acid significantly increased the number of cobs and total soluble solids of sweet corn, respectively.
Additional distribution records of butterflies (Lepidoptera: Rhopalocera) with seven species new to Nepal Sajan KC; ANISHA SAPKOTA
Biodiversitas Journal of Biological Diversity Vol. 23 No. 5 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230555

Abstract

Abstract. Sajan KC, Sapkota A. 2022. Additional distribution records of butterflies (Lepidoptera: Rhopalocera) with seven species new to Nepal. Biodiversitas 23: 2711-2743. New distribution records of some butterflies of Nepal are given in terms of geographical area, season and elevation based on our observations since early 2017 to late 2021. Seven new species: Hasora taminatus (Hübner, 1818), Hasora vitta (Butler, 1870), Celaenorrhinus pyrrha de Nicéville, 1889, Seseria sambara (Moore, [1866]), Coladenia agni (de Nicéville, [1884]), Erionota thrax (Linnaeus, 1767) and Tarucus balkanicus (Freyer, 1844), one new subspecies: Pelopidas conjuncta narooa (Moore, 1878) are added to the known butterfly fauna of Nepal along with two other species which need further confirmation: Rohana tonkiniana Fruhstorfer, 1906 and Neptis capnodes Fruhstorfer, 1908. Six species: Gerosis sinica (C. & R. Felder, 1862), Aeromachus kali (de Nicéville, 1885), Aeromachus pygmaeus (Fabricius, 1775), Niphanda cymbia de Nicéville, [1884], Tarucus nara (Kollar, 1848) and Discophora timora Westwood, [1850] have been reported for the second time in Nepal. This paper provides an updated distribution record of close to 200 species of butterflies in Nepal while discussing the possible causes of change in their distribution.
The structure communities of gastropods in the permanently inundated mangrove forest on the north coast of Jakarta, Indonesia Endang Hilmi; Lilik Kartika Sari; Tri Nur Cahyo; Rose Dewi; Tjahjo Winanto
Biodiversitas Journal of Biological Diversity Vol. 23 No. 5 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230554

Abstract

Abstract. Hilmi E, Sari LK, Cahyo TN, Dewi R, Winanto T. 2022. The structure communities of gastropods in the permanently inundated mangrove forest on the north coast of Jakarta, Indonesia. Biodiversitas 23: 2699-2710. The permanently inundated mangrove ecosystem support gastropods communities to live and grow. The gastropods communities require a mangrove ecosystem for feeding, spawning, nursing, distributing, and breading. The distribution of gastropod communities is shown by the number, association, and clustering of gastropods and is influenced by the potential of permanent water inundation. This research used association, clustering, and correlation methods to describe the distribution of gastropod communities. The results of this research showed that the mangrove ecosystem on the north coast of Jakarta was dominated by Avicennia marina, Bruguiera gymnorrhiza, Calophyllum inophyllum, Cerbera manghas, Excoecaria agallocha, Nypa fruticans, Rhizophora apiculata, Rhizophora mucronata, Rhizophora stylosa, Sonneratia caseolaris, Terminalia catappa, and Thespesia populnea with density between 20-2800 trees/ha. However, the gastropods communities in the mangrove ecosystem were dominated by Cassidula angulifera, Cassidula aurisfelis, Cassidula plecotrematoides, Cassidula rugata, Ellobium aurisjudae, Ellobium gangeticum, Pythia plicata, Cerithidea obtusa, Cerithidea quoyii, and Melanoidessarius tuberculata with abundance between 0.36 to 6.68 ind/m2, 12 pairs positive association from 78 pairs, had uniform distribution (Moroshita index 0-0.87), and two clusters.
Ecological index of freshwater gastropods in Kolaka District, Southeast Sulawesi, Indonesia Salwiyah Salwiyah; ‪Muhammad Fajar Purnama; SYUKUR SYUKUR
Biodiversitas Journal of Biological Diversity Vol. 23 No. 6 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230630

Abstract

Abstract. Salwiyah, Purnama MF, Syukur. 2022. Ecological index of freshwater gastropods in Kolaka District, Southeast Sulawesi, Indonesia. Biodiversitas 23: 3031-3041. Kolaka District is one of the existing centers of high freshwater gastropod diversity in Southeast Sulawesi Province, Indonesia. more than 30 species of inland gastropods occupy this area and some of them (species) are used by local communities as food (daily consumption). This research was conducted for 4 months, namely January-April 2021 in Kolaka District, Southeast Sulawesi, Indonesia. The purpose of this study was to determine the ecological index (abundance, diversity, evenness, species richness, dominance, and distribution pattern) of the inland gastropod community in Kolaka. The sampling location of gastropods was determined qualitatively using the purposive sampling method and sampling using a simple random sampling technique (Quantitative based). Gastropod samples were collected manually (hand picking) using a paralone pipe (3.5 inches), Sieve (1 mm), and Gloves. The total gastropod sample obtained during the study was 1929 individuals consisting of 9 families, 19 genera, and 33 species. The average abundance of the gastropod population reached 96.45 ind./m2 and the abundance of gastropod species ranged from 0.75-15.05 ind./m2. Overall, the results of the gastropod ecological index analysis showed a stable condition, where the diversity of gastropod species was categorized as high (H': 3.20), moderate evenness (E: 0.90), and high species richness (R: 4.23), dominant dominance. showed that there were no dominant species (C: 0.1) and the distribution of gastropods showed a clumped pattern (Ip: 0.01). Empirically the ecological index data is a scientific justification related to the sustainability of inland water ecosystems or a description of the current freshwater homeostasis system in Kolaka.
Morpho-physiological responses of iaa9 tomato mutants to different levels of PEG simulated drought stress ERNI SUMINAR; RAHMAT BUDIARTO; ANNE NURAINI; SYARIFUL MUBAROK; HIROSHI EZURA
Biodiversitas Journal of Biological Diversity Vol. 23 No. 6 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230639

Abstract

Abstract. Suminar E, Budiarto R, Nuraini A, Mubarok S, Ezura H. 2022. Morpho-physiologicalresponsesof iaa9 tomato mutants to different levels of PEG simulated drought stress. Biodiversitas 23: 3115-3126.This study aimed to analyze the morphological and physiological responses of iaa9 mutants and its WT-MT to different levels of drought stress in in vitro growing medium. This study applied a completely randomized design with two factors, i.e., tomato genotypes and polyethylene glycol (PEG) - induced drought stress levels. The factor of varieties consisted of three levels, i.e., WT-MT as control (G1), iaa9-3(G2), and iaa9-5 (G3). The factor of PEG-induced drought stress also consisted of four levels, i.e., 0% PEG as control (PEG0), 5% PEG (PEG5), 10% PEG (PEG10), and 15% PEG (PEG15). The results observed 12 weeks after culture showed the variations of the morpho-physiological response of WT-MT and mutant genotypes to PEG-induced in vitro drought stress. The WT-MT showed a higher reduction in plantlet height, root number, and root length than mutants under severe drought conditions. The plantlet fresh and dry weight of iaa9-3and iaa9-5were higher than its WT-MT under no drought conditions. The total chlorophyll content of WT-MT was lower than iaa9-5due to the significant gain of chlorophyll-b on that mutant rather than its WT-MT. However, the analysis of principal components and correlation revealed the reduction of morphological size and leaf pigment content in response to drought stress, irrespective of genotype factor. These results suggest that in vitro selection techniques using PEG is useful for the initial screening of drought-tolerant tomato.
Diversity and abundance of water birds in the mangrove area of south coast of Bangkalan, Madura Island, Indonesia Ajeng Ramadhani; Reni Ambarwati; Ragil Satriyo Gumilang
Biodiversitas Journal of Biological Diversity Vol. 23 No. 6 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230657

Abstract

Abstract. Ramadhani A, Ambarwati R, Gumilang RS. 2022. Diversity and abundance of water birds in the mangrove area of south coast of Bangkalan, Madura Island, Indonesia. Biodiversitas 23: 3277-3284. The southern coastal mangrove area of ??Bangkalan, Madura Island, Indonesia, is an important bird habitat, especially for water birds. This study aimed to analyze the diversity and abundance of water birds in the southern coastal mangrove area of ??Bangkalan, Indonesia, as well as the environmental carrying capacity of this area as their habitat. Sampling was carried out using a birdwatching approach at four research stations. The diversity of water birds was analyzed using the Shannon-Wiener diversity index, while the abundance of water birds was calculated based on the abundance index. Environmental carrying capacity was analyzed descriptive-quantitatively based on the habitat profile. The results indicated that there were 15 species of water birds in the mangrove area belonging to five families in four orders, namely Charadriiformes, Ciconiiformes, Pelecaniformes, and Suliformes, with a diversity index of 1.547. There were three abundant species of water birds, namely the little egret (Egretta garzetta), Javan Pond-heron (Ardeola speciosa), and Great Egret (Ardea alba). In addition to water birds, there were nine species of arboreal birds in this area. The areas with dense mangroves provide better habitat carrying capacity for water birds compared to other coastal areas.

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