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INDONESIA
Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences
Published by Universitas Brawijaya
ISSN : 20875517     EISSN : 25274376     DOI : -
Core Subject : Agriculture, Social,
Agriculture, Biological Sciences & Forestry Environmental Science
The Journal of Tropical Life Science (JTLS) provides publication of full-length papers, short communication and review articles describing of new finding or theory in living system, cells and molecular level in tropical life science and related areas. The journal publishes articles that report novel findings of wide Tropical Life system phenomenon in the areas of biodiversity, agriculture, fisheries, health, husbandry, forestry and environmental technology. JTLS has 1 volume with 3 issues per year.
Arjuna Subject : -
Articles 1,001 Documents
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Mangrove Conservation in East Java: The Ecotourism Development Perspectives Luchman Hakim; Dian Siswanto; Nobukazu Makagoshi
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.14

Abstract

An analysis of the role of mangrove ecosystems in tourism was undertaken in order to build a strategy for mangrove conservation and conceptualize sustainable mangrove-based tourism development in East Java, Indonesia. The results of the present study suggest that mangroves could be used as nature-based tourism destinations. While tourism in mangrove areas in East Java clearly contributes to mangrove conservation, it still lacks a mangrove tour program, in which it is important to deliver the objectives of ecotourism. For the sustainable use of mangrove biodiversity as a tourist attraction, it is essential to know the basic characteristics of mangroves and establish mangrove tourism programs which are able to support a conservation program. It is also crucial to involve and strengthen the participation of local communities surrounding mangrove areas. The involvement of local wisdom could increase the sustainability of mangrove ecosystems.
A Different Approach to Assess Oxidative Stress in Dengue Hemorrhagic Fever Patients Through The Calculation of Oxidative Stress Index Edi Hartoyo; Iskandar Thalib; Cynthia Maharani Puspita Sari; Windy Yuliana Budianto; Eko Suhartono
Journal of Tropical Life Science Vol. 7 No. 3 (2017)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.07.03.08

Abstract

The objectives of this study were to determine the involvement of Oxidative Stress (OS) in the pathogenesis of dengue hemorrhagic fever (DHF) through the analysis of oxidative stress Index (OSI). The levels of malondialdehyde (MDA), superoxide dismutase (SOD) and catalase (CAT) activity, and OSI were measured in 61 child dengue patients and (aged 6 months–18 years) with three different stages of DHF, i.e stage I, II, and III. The results show that the levels of MDA, SOD and CAT activity, and OSI significantly different between the group. The all parameters that investigated in this present study seems higher MDA level and OSI in the higher grade of DHF, except for SOD and CAT activity. From this result, it can be concluded that oxidative stress pathways might be involved in the pathomechanism of DHF and OSI might be used as a biomarker for OS and the severity in DHF patients.
Analysis of Technical Efficiency of Small-Scale Rice Farmers in Indonesia Fitri Wardana; Naoyuki Yamamoto; Hideyuki Kano
Journal of Tropical Life Science Vol. 8 No. 2 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.02.01

Abstract

In this study, we analyzed the performance of small-scale rice farmers who used hand tractors in Jember Regency, Indonesia. Data were collected from 144 small-scale rice farmers in six districts through the use of a questionnaire in September 2015. The Data Envelopment AnalysisSlack-Based Model (DEA-SBM) was used to calculate the technical efficiency of small-scale rice farmers based on seven inputs and one output by determining Overall Technical Efficiency (OTE), Pure Technical Efficiency (PTE), and Scale Efficiency (SE). The results showed that out of 144 small-scale rice farmers, only nine farmers and 14 farmers were evaluated as strongly efficient and weakly efficient, respectively, while the rest were categorized as inefficient. The average values for OTE, PTE, and SE were 0.41, 0.63, and 0.61, respectively. The observed inefficiency was because of both poor input utilization (managerial inefficiency) and failure to operate at an optimal scale (scale inefficiency). Such analysis of technical efficiency can encourage small-scale rice farmers to enhance their performance and profitability.
The Effect of Human Pellucide Zone 3 Monoclonal Antibody on Expression of Bcl-2 and Bax in Follicle Granulosa Cells of Mice Ovary Riny Natalina; Tatit Nurseta; Sri Winarsih
Journal of Tropical Life Science Vol. 8 No. 2 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.02.09

Abstract

Pellucide zone 3 (ZP3) involves in fertilization mechanism. Moreover, antibody of ZP3 can develop to inhibit egg and sperm interaction. This study aims to determine the effect of hZP3 (mab-hZP3) monoclonal antibody on the expression of Bcl-2 and Bax in follicle granulosa cells of the mice ovary. Female mice BALB/c were divided into 12 groups which consisted of control and experimental treatment group. Each group was added with 30% of total mice as error sample (1 mice). Each groups were treated differently: 50 µl adjuvant Al(OH)3 in 50 µl Tris HCl, 20 µg Mab-hZP3, 40 µg Mab- hZP3, and 60 µg Mab-hZP3. Each group was dissected at day 10, 15 and 20. Measurement of Bcl-2 and Bax was performed with immunohistochemistry. Data was analyzed by Two-Way ANOVA. There was no significant effect of Mab-hZP3 administration in various doses on Bcl-2 (p=0.0825), and Bax (p=0.836). There was no significant effect of administration of Mab-hZP3 in time (p=0.807), neither on Bcl-2 expression (p=0.088) and Bax (p=0.227). The lowest Bcl-2 level was found in dose of 60 µg in day 15. There was no significant effect of Mab-hZP3 in various doses and time (p=0.691), neither to Bcl-2 and Bax. Such results obtained due to the specificity of a monoclonal antibody that recognizes specific antigen. Mab-hZP3 is proposed as immunocontraception for women causing no disturbance of folliculogenesis.
Sequence Analysis of Rifampicin Resistance Determining Region (RRDR) of Mycobacterium tuberculosis Mitesh Shrestha; Hemanta Kumari Chaudhary; Pradip Kumar Chaudhary; Bal Hari Poudel
Journal of Tropical Life Science Vol. 8 No. 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.15

Abstract

Mycobacterium tuberculosis has become the cause for one of the most dreadful disease which the mankind has ever known i.e. Tuberculosis. The organism holds the ability to infect multiple organs at a time resulting in multiple symptomatic presentations in pathogenic condition while in non-pathogenic condition, it can lay dormant and remain asymptomatic. The research work presented here aimed at sequencing of Rifampicin Resistance Determining Region (RRDR) of the rpoB gene present in phenotypically multidrug resistant M. tuberculosis. The findings showed that the major point of mutations to be present within this region was at codon 516, 526, and 531. Early diagnosis of multidrug resistance in any pathogen has become a pre – requisite for proper treatment and efficient elimination of pathogenic organisms from the host with minimal toxicity. Similarly, understanding the mutation dynamics of target genes also help in novel drug design and discovery.
Immunohistochemistry Evaluation of TGF-β1, SOX-9, Type II Collagen and Aggrecan in Cartilage Lesions Treated with Conditioned Medium of Umbilical Cord Mesencyhmal Stem Cells in Wistar Mice (Rattus novergicus) Bintang Soetjahjo; Mohammad Hidayat; Hidayat Sujuti; Yuda Fibrianto
Journal of Tropical Life Science Vol. 8 No. 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.05

Abstract

Currently, umbilical cord mesenchymal stem cells have the potential to be used as treatment options for any cartilage lesion. This research aimed to evaluate the effects of conditioned medium from umbilical cord mesenchymal stem cells (UC-MSC) on damaged cartilage through the expression of proteins TGF-β1, SOX-9, type II collagen and aggrecan, which are known to be related to chondrogenesis. UC-MSC were isolated from 19-days-pregnant Wistar mice and were cultured using the standard procedure to obtain 80% confluence. Subsequently, the culture was confirmed through a microscopic examination that was driven to be an embryoid body to obtain a pre-condition medium. This research utilized 3-month-old male Wistar mice and was categorized into 6 groups (3 control and 3 treatment groups). Each animal had surgery performed to create a femur condyle cartilage defect. The treatment groups were administered a dose of stem cells at 1 mL/kg. Next, immunohistochemical (IHC) staining was performed to examine the expression of TGF-β1, SOX-9, type II collagen and aggrecan in the 2nd, 3rd, and 4th month of evaluation. The results were analyzed statistically using ANOVA test. For each of the treatment groups, there was increased expression (p < 0.05) in all proteins TGF-β1, SOX-9, type II collagen and aggrecan when compared with control groups at the 2nd, 3rd, and 4th month of evaluation. Pre-conditioned medium from UC-MSC potentially increases the expression of TGF-β1, SOX-9, type II collagen and aggrecan in the damaged cartilage of Wistar mice.
Fruit Nutrients of Five Species of Wild Raspberries (Rubus spp.) from Indonesian Mountain’s Forests Muhammad Imam Surya; Siti Suhartati; Lily Ismaini; Yuyun Lusini; Destri Destri; Dian Anggraeni; Suluh Normasiwi; Nurul Asni; Mirwan Abu Bakar Sidiq
Journal of Tropical Life Science Vol. 8 No. 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.13

Abstract

Rubus spp. (wild raspberries) is one of genera belongs to Rosaceae, also distributed in the mountain forest of Indonesia. It has a high potency to be cultivated plant. Although, some of the potential of Rubus has already known, information of about fruit nutrients of species that distribute in the mountain forest of Indonesia are not known yet. This study was aimed to determine the fruit nutrients of five species of wild raspberries that was collected in Cibodas Botanical Garden. The results of our experiments demonstrate that the fruits nutrients contents varied among five species of wild raspberries from Indonesian mountain's forests. Rubus fraxinifolius has the highest content of sugar (5.05 g sugar per 100 g fruits) compared to Rubus rosifolius, Rubus chrysophyllus, Rubus lineatus and raspberry. During the ripening and ripe period, there were a different value of vitamin C and iron contents. The highest vitamin C of R. fraxinifolius (83.65 mg/100 gram) on the ripening fruit stage II. On the other hand, the highest vitamin C of R. rosifolius (54.30 mg/100 gram) found on the stage of ripe fruit.
Bioactivity of Antibacterial Compounds Produced by Endophytic Actinomycetes from Neesia altissima Rina Hidayati Pratiwi; Muhammad Hanafi; Nina Artanti; Rosa Dewi Pratiwi
Journal of Tropical Life Science Vol. 8 No. 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.07

Abstract

Identification of alternate bioactive compounds isolated from microbial endophytes from plants may lead to better solution against antibiotic resistance. Main objective of this research is to determine the bioactivity of antibacterial compounds produced by endophytic actinomycetes, which was isolated from stem bark of Neesia altissima Bl. at Halimun Salak Mount. Detection of bioactive compounds was assayed using Thin Layer Chromatography (TLC) by employing bioautography. Bioactivity was assayed using crude extract against five microorganisms using agar diffusion methods. Tetracycline was used as a positive control. The result of antibacterial activity from endophytic actinomycetes isolate revealed that the bioactive compounds were effective in inhibiting the growth of bacteria Bacillus cereus (1.25 mm), Salmonella typhimurium (5.75 mm), and Shigella flexneri (4.37 mm). Bioactivity of ethyl acetate extract from bioactive compounds of endophytic actinomycetes has an antibacterial activity against bacteria Bacillus cereus (13.00 mm) and Staphylococcus aureus (15.90 mm), at a concentration of 250,000 ppm. Each of TLC fraction was able to inhibit growth of B. cereus at a minimum concentration of 10,000 ppm. In conclusion, the bioactive compounds produced by endophytic actinomycetes can have inhibitory effect towards B. cereus. The category of that compounds are narrow spectrum. The bioactive compound isolated from endophytic actinomycetes may have other implications such as anticancer, antifungal, and antioxidant.
The Effect of Low Power Ultrasonic Wave Exposure to Suppress Methicillin-Resistant Staphylococcus aureus (MRSA) In Vitro Mas Mansyur; Erni Yudaningtyas; Sumarno Reto Prawiro; Edi Widjajanto
Journal of Tropical Life Science Vol. 8 No. 2 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.02.07

Abstract

The incidence of methicillin-resistant Staphylococcus aureus (MRSA) infection keeps increasing in every part of the world. Currently, the infection prevalence of MRSA has reached 70% in Asia. In Indonesia in 2006 the prevalence was 23.5%; the infection prevalence of MRSA in RS Atmajaya Jakarta reached 47%, in RSUP Dr. Moh. Husin Palembang reached 46%, and RSUD Abdul Moeloek Lampung in 2013 reached 38.4%. MRSA is multiresistant to antibiotics and is hard to kill compared to most other negative gram bacteria. The purpose of this research is to find the lethal power and exposure of ultrasonic waves to kill MRSA, monitoring its ef-fects via changes in shape, size, structure and Gram staining as indicators. The observations were done mac-roscopically by culturing the MRSA in a petri dish filled with Chromagar MRSA medium, while the morpho-logical observations of MRSA were done by SEM, changes in the structure using TEM, and changes in the color of MRSA cells using Gram staining. Ultrasonic wave exposure, at a lethal power = 8.432 watt, killed a significant percentage of MRSA over the control (p = 0.000). The death indicators of the MRSA due to expo-sure to ultrasonic waves of various power were: changes in shape of MRSA affected by ultrasonic power (p = 0.005), changes in size is not affected by ultrasonic power (p= 0.470), the stain of MRSA cell staining from purple to pink affected by ultrasonic power (p = 0.000), all compared with the control. MRSA died due to ne-crosis, with physical evidence of the MRSA death such as mechanical stress marked by swollen MRSA cell, shift cell wall, crack and tears, cavitation marked by pieces of MRSA cell in the field of view due to explosions inside the cell, change to an irregular cell shape, and changes in color from black to transparent.
Using Benthic Diatom to Assess the Success of Batch Culture System Phytoremediation Process of Water Irrigation Catur Retnaningdyah; Endang Arisoesilaningsih
Journal of Tropical Life Science Vol. 8 No. 3 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.03.08

Abstract

Diatoms or phytobenthic are often used as bio-indicators of water quality in freshwater ecosystems such as rivers, but have never been used for monitoring the quality of artificial water ecosystems. The objective of this research is to use the diatom as a bioindicator for measurement the success of phytoremediation process of irrigation water that has status hyper-eutrophic and is polluted from organic materials using polyculture of various local hydromacrophytes through batch culture system. This experimental study was conducted in a greenhouse through planting some local emergent, submerged and floating leaf hydromacrophytes on a 30 L bucket with a given substrate from sand and gravel. The experiment used a completely randomized design with two treatment included phytoremediation model and control in the form of substrate without hydromacrophyte which repeated three times at the same time. The success of phytoremediation model was determined through some biotic diatoms indices (Percentage Pollution Tolerant Value/%PTV, Tropical Diatom Index/TDI and Shannon Wiener Diversity Index) as bioindicator and the improved water physics chemical quality on days 0, six, and 13 after incubation. The results showed that phytoremediation process using polyculture hydromacrophytes through batch culture system for 13 days significantly improving the quality of irrigation water. Based on some biotic diatom indices, the water was improved from heavily organic pollution to moderately organic pollution (%PTV), from hypereutrophic to become eutrophic (TDI) and from moderately polluted become slightly polluted (Shannon Wiener Diversity Index). This results also supported from water physico-chemical parameters. Poly-culture of some local hydromacrophytes for six days significantly decreased the organic matter content of irrigation water was reflected from the decrease concentration of Biochemical Oxygen Demand/BOD (14.79 mg/L to 3.61 mg/L), Total Suspended Solid/TSS (14.6 mg/L to 0.08 mg/L), turbidity (19.97 NTU to 1.46 NTU), nitrate (1.44 mg/L to 0.03 mg/L), orthophosphate (0.24 mg/L to 0.042 mg/L), Total Kjeldahl Nitrogen (TKN) (0.93 mg/L to 0.68 mg/L), and free chlorine (0.09 mg/L to 0.05 mg/L), while concentration of Chemical Oxygen Demand (COD) decreased significantly 13 days after incubation from 48.3 mg/L to18.2 mg/L.

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