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All Journal BAREKENG: Jurnal Ilmu Matematika dan Terapan Enthusiastic : International Journal of Applied Statistics and Data Science Automotive Experiences Bulletin of Applied Mathematics and Mathematics Education STATISTIKA Emerging Statistics and Data Science Journal
Yotenka, Rahmadi
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Aerospace Engineering Automotive Engineering Chemical Engineering, Chemistry & Bioengineering Computer Science & IT Control & Systems Engineering Decision Sciences, Operations Research & Management Economics, Econometrics & Finance Electrical & Electronics Engineering Energy Engineering Materials Science & Nanotechnology Mathematics Mechanical Engineering Physics Transportation

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Journal : Bulletin of Applied Mathematics and Mathematics Education

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Pipeline on microarray data analysis: Pre-processing Fajriyah, Rohmatul; Kongchouy, Noodchanath; Ayudhaya, Wanvisa Saisanan Na; Yotenka, Rahmadi; Danarwindu, Ghiffari Ahnaf
Bulletin of Applied Mathematics and Mathematics Education Vol. 5 No. 1 (2025)
Publisher : Universitas Ahmad Dahlan

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.12928/bamme.v5i1.12539

Abstract

Bioinformatics is blooming and its data are store in some repository offline and or online. Yet some basic concepts are not fully disseminated. The paper intends to provide the reader with a review of one important concept in the pipeline bioinformatics data analysis of microarray, pre-processing. In pre-processing, there are four steps, background correction, normalization, probe correction and summarization. Each step consists of several methods, and we describe each method to give a better understanding on how it works theoretically. We focused on microarray data from Affymetrix platform with single-color chip.
Co-Authors Agustinus Purna Irawan Akbar, Wahyu Sa'dun Anindita, Sukma Ayudhaya, Wanvisa Saisanan Na Cahyaningrum, Nafisah Hanan Cionita, Tezara Danarwindu, Ghiffari Ahnaf Fitriyana, Deni Fajar Ismail, Nur Hidayah Kireyna Cindy Pradhisa, Kireyna Kongchouy, Noodchanath Maharani, Shafira Mas'udi, Nafisah Mas'ud Muhammad Khafidh Putera, Finny Pratama Rifky Ismail Rohmatul Fajriyah Siregar, Januar Parlaungan Suparna Yovita, Zulma Zulkarnaen Anas, Irfan