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INDONESIA
Jurnal Biodjati
Published by Universitas Islam Negeri Sunan Gunung Djati Bandung
ISSN : 25481606     EISSN : 25414208     DOI : 10.15575/biodjati
Core Subject : Science,
Biochemistry, Genetics & Molecular Biology Earth & Planetary Sciences
Arjuna Subject : -
Articles 15 Documents
 1   2 
Search results for , issue "Vol 7 No 2 (2022): November" : 15 Documents clear
Diversity of the Cave-Dwelling Bat (Chiroptera) in the Ngobaran Coastal Area, Karst of Gunung Sewu Bagus Putra Prakarsa, Tatag; Putri, Rizka Apriani; Rahmawati, Yunita Fera; Dalee, Abdullah Dolah
Jurnal Biodjati Vol 7 No 2 (2022): November
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v7i2.20163

Abstract

Bats (Chiroptera) are divided into two suborders (Yinpterochiroptera and Yangochiroptera). More than 50% of species of bats use caves as their roosting sites. Thus, they play a crucial role in the cave ecosystem. For that reason, they also exist as keystone species in the karst area. Gunung Sewu is one of the karst areas in Indonesia that best exemplifies tropical karst. Furthermore, Gunung Sewu is still at risk of habitat loss despite being designated as a Geopark. This study aimed to understand the diversity of bats that live in caves in the karst region of Gunung Sewu, specifically in four caves near Ngobaran Beach between April and June 2020. A harp net and misnet placed at the cave’s entrance were used to capture bats for data collection. After they were captured, the bats were identified using Morphometry and the Shannon-Wiener index. Through another index, Margalef index, the bat diversity in the four cave habitats was expressed, with a discovery that there are many different species. Based on the Jaccard similarity index, bats were categorized again using cluster analysis and the unweighted pair-group method using arithmetic averages (UPGMA). A total of nine species across five families were identified. The diversity of existing species variety was also recognized by analyzing the composition of the four cavern inhabitants. The four cave ecosystems’ bat diversity was divided into three categories: moderate variety, low similarity, and high species diversity. Except for Cekelan 1 Cave and Gebyog Cave (P=0.015), other variations did not demonstrate a meaningful difference (P0.05). This demonstrates how different each ecosystem is. Therefore, they could be classified as potentially spoiled habitats, demanding additional conservation efforts.
An Extracellular Pectinase from ISH16 Bacteria Isolated Induced by Coffee Pulp Waste Substrate Muzakhar, Kahar; Elida, Farah Salma; Putrasetya, Ramdhan; Siswoyo, Siswoyo; Winarsa, Rudju; Wiyono, Hidayat Teguh
Jurnal Biodjati Vol 7 No 2 (2022): November
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v7i2.20279

Abstract

An α-1,4-glycosidic bonds galactoses pectin, mainly composed of a D-galacturonic acid chain, are important biomaterial widely used in industries. Utilizing this material, a bioprocess, including the biocatalysis pectinase, is often needed. Pectinase production was optimized in 7 days SSF at 37°C, and the pectinase activities were daily measured by the method of Somogy-Nelson. The optimum pectinase production was 0.166 U/ml on the fourth day SSF. Purification using open column ion exchange chromatography DEAE cellulose DE-52 resulted in 1030.9 folds of pectinase purity with a yield of 25.9%. The enzyme was at optimal activity at pH six and attended stable in the pH range of 5.5-8, while optimal activity at a temperature of 50°C and was stable in the range of 30-45°C. The pectinase activity increased by 120% with the addition of 10 mM Mg2+, and 95% retained when 10 mM Ca2+ was added. The presence of 10 mM Na+, K+, and Fe2+ resulted in a slight effect of activity at 85%, 83%, and 78%. However, it was strongly inhibited by 10 mM Al3+ and retained 25%. Based on the results above, the microbial utilization of coffee pulp waste by ISH16 bacteria pectinolytic is one opportunity to produce valuable pectinase with low-cost production, so comprehensive examination in large-scale production is needed too. In this paper, all research detail steps were described.
Association Analysis of Seagrass Coverage and Human Activities in Nusa Lembongan Wardono, Suko; Sobhytta, Elland Yupa; Dhananjaya, I Gusti Ngurah Agung; Lasniroha, Rodo; Pumpun, Yuniarti Karina; Mashuda, Mochammad Miftakhul; Saputra, Dewa Gde Tri Bodhi; Yudiarso, Permana
Jurnal Biodjati Vol 7 No 2 (2022): November
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v7i2.20307

Abstract

Nusa Lembongan has high marine biodiversity, including seagrass. Seagrass is a plant that lives submerged in a marine or estuary water that functions as a nursery ground, trapping sediment, and beach protector, so it is important to know the condition of seagrass coverage, especially in Nusa Lembongan for managing the Nusa Penida Marine Protected Area. This study aimed to understand the condition of seagrass coverage and the factors influencing the existence of its ecosystem in Nusa Lembongan. According to reslut in two stations, it was found that six of the twelve types of seagrasses in Indonesia, namely Enhalus acoroides, Thalassia hemprichii, Cymodocea serrulata, Cymodocea rotundata, Halodule pinifolia, and Halophila ovalis. From the two stations (LMB01 and LMB02), the total seagrass coverage was 38.10±30.98% or the medium category. The seagrass communities in the station areas were generally formed by 3 types of seagrasses; Thalassia hemprichii, Cymodocea serrulata, and Cymodocea rotundata. LMB02 has higher seagrass coverage than LMB01. The seagrass coverage is inversely proportional to the intensity of human activity.
The Epilithic Diatom Community as a Bioindicator of water quality Brangkal Subwatershed in the Mojokerto Area Prahardika, Bayu Agung; Styawan, Widi Muhammad Lutsfi Dwi
Jurnal Biodjati Vol 7 No 2 (2022): November
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v7i2.20439

Abstract

Diatoms are widely used as bioindicators of water quality because of their short life cycle and sensitivity to changes of environmental conditions in waters.  One type of diatom that is used as a bioindicator is an epilithic diatom. Epilithic diatoms are one of the diatom microalgae communities attached to rock, so they are difficult to be carried away by currents. This study aimed to determine the type, composition, abundance, diversity, and dominance of epilithic diatoms found in the waters of the Brangkal subwatershed, and to determine the quality of water in the Brangkal subwatershed based on the epilithic diatom tropic index. Epilithic diatom samples were taken from 4 stations in the Brangkal subwatershed, Mojokerto Regency at the beginning of the dry season (July-August). The analysis carried out includes abundance, diversity index, dominance index, and Diatom Trophic Index (TDI). Based on the results of the study, 17 genera of epilithic diatoms were found, with the highest abundance of epilithic diatoms, including Navicula, Cocconeis, Nitszchia, and Gomphonema. The diversity index of all stations was in the medium category, with a value between 1.206 to 1.882. The lowest dominance index at station 1 was 0.167 and the highest was at station 4 with 0.373. In addition, the observed water quality is based on the Diatom Trophic Index (TDI), stations 1 to 3 are in a good category, and stations 4 are in a bad category. 
Pharmacophore Analysis of Monoterpene Melaleuca leucadendra as an Inhibitor for 3CLPro of the SARS-CoV-2 Syarifah, Ismi Farah; Suryani, Yani; Adzani, Ghea Gema; Kurniawan, Isma Dwi; Taupiqurrohman, Opik
Jurnal Biodjati Vol 7 No 2 (2022): November
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v7i2.20496

Abstract

The monoterpene compound has been reported to have antiviral activities . This study aimed to test the monoterpene compound in Melaleuca leucadendra to inhibit the SARS-CoV-2 virus. The monoterpenes tested were α-Pinene, β-Pinene, Linalool, α-Terpineol, and Terpinene-4-Ol. The method used was computational through pharmacophore analysis. The indicator for the quality of the compound was the fit score. A fit score of more than 50% indicates a good-quality compound, while a fit score of less than that indicates a  poor-quality compound. Based on the analysis results, the monoterpene compound in Melaleuca leucadendra can potentially inhibit the SARS-CoV-2 virus directly through the inhibition of 3C-like protease. The linalool showed a fit score of 55% with interactions of hydrophobic, electrostatic, and hydrogen bonds. All the compounds did not inhibit the metabolic process and were safe, possibly having no side effects based on ADMET analysis.

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