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INDONESIA
Journal of Fisheries & Marine
Published by Universitas Airlangga
ISSN : 20855842     EISSN : 25280759     DOI : https://doi.org/10.20473/jipk.v16i1.44436
Core Subject : Science,
Biochemistry, Genetics & Molecular Biology
Jurnal Ilmiah Perikanan dan Kelautan (JIPK; English: Scientific Journal of Fisheries and Marine) ISSN International Centre | ISSN:2528-0759 (Online) | ISSN: 2085-5842 (Print) JIPK is a peer-reviewed and open access biannually (April and November) that published by the Faculty of Fisheries and Marine, Universitas Airlangga. The aim of JIPK is to publish exciting, empirical research, recent science development, and high-quality science that addresses fundamental questions in fisheries and marine. JIPK only accepts manuscripts written in full English and processes submitted original script related of scope to fisheries and marine science and not being published by other publishers. We publish four categories of papers; 1) Original research papers, 2) Critical review articles, 3) Short communications, and, 4) Special Issue on applied or scientific research relevant to freshwater, brackish and marine environments. This journal gives readers the state of art of the theory and its applications of all aspects of fisheries and marine science. The scope of this journal includes, but is not limited to the research results of: Aquaculture, Fish Diseases, Marine science, Oceanography, Aquatic resources management, Fisheries product technology, Fish capture, technology, Fishery agribusiness, Fishery biotechnology/molecular genetics, Fish health management. JIPK has been indexed in Scopus, DOAJ, Sinta 1, Dimensions, Crossref, and others indexing. This journal has been accredited as a 1st Grade Scientific Journal (Sinta 1) by the Ministry of Research, Technology, and Higher Education of Indonesia since 8 December 2020.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia
Articles 602 Documents
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Characteristics of Haematococcus pluvialis Cultivated from Snakehead Fish Wastewater Media Culture with UV and Ethanol Treatment Marini Wijayanti; Muhammad Rizky Ariansyah Putra; Dade Jubaedah; Mohamad Amin; Mirna Fitrani; Tanbiyaskur Tanbiyaskur
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 2 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.87871

Abstract

Graphical Abstract   Highlight Research 1. Production of Haematococcus microalgae using optimum Walne fertilizer media in snakehead fish farming waste. 2. Utilization of UV and/or ethanol to increase lipid production in Haematococcus. 3. Changes in the fatty acid composition of Haematococcus microalgae after UV and/or ethanol treatment. 4. Haematococcus protein levels decrease when treated with UV and/or ethanol.   Abstract Haematococcus pluvialis is a single-celled green microalga that is a possible source of bioactive compound. H. pluvialis cultivation mostly employs pro-analysis media, with organic components frequently limited. The use of wastewater from snakehead fish rearing to cultivate H. pluvialis to produce necessary fatty acids and amino acids has never been investigated. Environmental stress-induced physical treatment is likely to boost lipid production. There have been very few investigations on fatty acid composition in lipid synthesis from H. pluvialis cultivated in fish-rearing effluent. The purpose of this work was to assess the potential of snakehead fish wastewater (SFWW) as a culture medium for H. pluvialis, as well as to examine the fatty acid and amino acid properties of the microalga after exposure to UV and ethanol stress during the stationary phase.  The study consisted of two sequential experiments:  optimizing growth to determine the optimal Walne medium supplementation for H. pluvialis growth in SFWW, and inducing stress to assess the effects of ethanol and UV irradiation on H. pluvialis biochemical. The results showed that the SFWW medium supports the growth of H. pluvialis, with addition of 0.75 ml L-1 Walne medium achieving the highest densities (28.13±0.38 ×106 cells mL−1). Ethanol and UV are excellent at inducing stress in H. pluvialis. The maximum lipid percentage was seen in the Ethanol-UV treatment, but this stress also reduced H. pluvialis protein content.  SFWW can be used to cultivate H. pluvialis by supplementing Walne. Further research is needed on treatments that can increase long-chain unsaturated fatty acids.
Towards Sustainable Hilsa Fish (Tenualosa ilisha) Management in Labuhanbatu Regency, North Sumatra, Indonesia: SWOT Analysis and Community Participation Rumondang Rumondang; Heru Gunawan; Muhammad Sabir Ramadhan; Syafrida Br Tambunan; Nurhadi Nurhadi; Abdul Ghofur; Dwi Arditiana
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 2 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.88635

Abstract

Graphical Abstract Highlight Research 1. The study applies the Rational, Analytical, and Holistic Strategic Governance (RAHSG) framework to Indonesian hilsa fisheries. 2. Survey reveals that 80% of coastal residents support conservation policies and value the hilsa’s ecological role. 3. SWOT analysis positions the Labuhanbatu hilsa fishery in a favorable growth quadrant for proactive management. 4. Results identify institutional fragmentation and limited population data as the primary barriers to sustainable governance.   Abstract Hilsa Fish (Tenualosa ilisha), despite its ecological and socio-economic importance in Labuhanbatu, Indonesia, is experiencing population decline due to overexploitation and habitat degradation, highlighting a critical need for management strategies. This study aims to analyze coastal community perceptions and participation in the management of hilsa fish and to formulate sustainable management strategies using Rational, Analytical, and Holistic Strategic Governance (RAHSG) framework and Strength, Weakness, Opportunity, Threat (SWOT) analysis in Labuhanbatu Regency. The RAHSG framework was used to structure the rational evaluation of governance evidence, integrate SWOT factor weighting, and support holistic interpretation in developing management strategies. The research used a descriptive method with quantitative and qualitative approaches through a questionnaire survey involving 100 proportionally selected respondents. Data were analyzed using the Likert scale and SWOT analysis. The results indicate that community perceptions of the ecological and economic value of hilsa fish are categorized as good to excellent, with more than 80% of respondents supporting conservation policies. The SWOT analysis yielded an internal factor score of 1.04 and an external factor score of 1.25, positioning hilsa fish management in Quadrant I (Aggressive Strategy). Key strengths identified include established formal regulations and well-known migration routes, while the primary weaknesses are limited population data and weak institutional coordination. This strategic position suggests that current healthy habitat conditions and cross-sector opportunities can be leveraged to mitigate threats from fishing pressure and migration route disruption. The study concludes that an integrated, participatory management approach is essential, focusing on interagency collaboration and the establishment of formal conservation zones. This aggressive strategy should prioritize community empowerment to sustain existing support. Future research should examine the institutional power dynamics and stakeholder cooperative behaviors required to scale this co-management model effectively.
Genetic Diversity and Differentiation in the Stingless Jellyfish (Mastigias sp.) in Marine Lakes in the Berau Archipelago, Indonesia Dewi Embong Bulan; Trifan Budi; Yadi; Nurfadilah; Wanlada Klangnurak
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 2 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.89221

Abstract

Graphical Abstract   Highlight Research 1. The first population genetic assessment of the Berau Archipelago (DKB and DKK) jellyfish populations. 2. Two lakes populations within Berau Archipelago exhibited low-to-moderate population genetic diversity level. 3. Retained connectivity yet distinct evolutionary history between DKB and DKK lakes population have been observed. 4. This research underscore vulnerability of the stingless jellyfish populations within Berau Archipelago that warrant effective conservation strategies.   Abstract Kakaban Lake in East Kalimantan, Indonesia, is characterized by unique hydrographic conditions that support distinctive biodiversity. The stingless jellyfish Mastigias sp., one of the lake’s endemic faunas, is hypothesized to have evolved a loss of stinging capability due to prolonged isolation and adaptation within this enclosed ecosystem. Despite its uniqueness, there is no population genetic baseline data available for this species in Kakaban and nearby Lakes, which could threaten their survivability. The data provide an initial basis for future monitoring and management planning. This study aimed to provide baseline population genetic diversity and differentiation data for Mastigias sp. population in Berau Archipelago. Samples from individual jellyfish were collected from Kakaban Lake (DKB, N=20) and Kuku Lake, Maratua Island (DKK, N=19). Based on partial fragment of mtDNA 16S rRNA sequences, genetic diversity, genetic differentiation, and demographic history were estimated between two populations. Genetic analysis revealed moderate diversity across both populations (H=10; h=0.487 ± 0.099; π=0.00127 ± 0.00035). Weak and non-significant population differentiation (FST= 0.012, p>0.05) was observed, alongside a high frequency of shared haplotypes, indicating retained connectivity between the two lakes. However, the presence of population-specific haplotypes in both DKB (6 haplotypes) and DKK (2 haplotypes) suggests evolutionary uniqueness, despite the overall weak genetic structure. Neutrality test consistent with pattern of demographic expansion following past bottleneck (Tajima’s D = -2.039, p<0.05). The Berau Mastigias lineage showed genetic distinctiveness but requires integrated morphological and genomic confirmation for species-level assignment. This study highlights evolutionary uniqueness of these populations, emphasizing the need for effective conservation strategies to ensure the longterm viability of this flagship species.
FRONT METER VOLUME 18 ISSUE 2 Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 2 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Abstract

BACK METER VOLUME 18 ISSUE 2 Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 2 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Abstract

Enhancement of Growth Kinetics and Biochemical Composition of Chlorella sorokiniana via Marine-Derived Biostimulant (AMPEP) Jurmin H Sarri; Noriam L Jalaidi; Wahaymin M Jamil; Suhana A Abduraup; Alhamin A Anuddin
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Abstract

Graphical Abstract Highlight Research 1. 25 mg L⁻¹ AMPEP produced the highest cell density (55.96 ×10⁶ cells mL⁻¹) and growth rate (1.02 day⁻¹). 2. Low AMPEP concentration maximized biomass yield (7.13 g L⁻¹). 3. AMPEP increased total carotenoids while chlorophyll a remained unchanged. 4. Lipid accumulation peaked at 25 mg L⁻¹ AMPEP (14.81% w/w).   Abstract Chlorella sorokiniana is widely utilized in aquaculture and biotechnology due to its high nutritional value, pigment content, and lipid productivity. However, optimizing its growth and biochemical composition through environmentally friendly supplements remains an important research focus. This study aimed to evaluate the effects of Acadian Marine Plant Extract Powder (AMPEP) supplementation on growth kinetics, biomass production, cell size, pigment accumulation, and lipid content of C. sorokiniana cultured in BG-11 medium. Five treatments were tested: GP-A (control, no AMPEP), GP-B (25 mg L⁻¹), GP-C (50 mg L⁻¹), GP-D (100 mg L⁻¹), and GP-E (150 mg L⁻¹). Cultures were maintained for 21 days under controlled light conditions and temperature with continuous aeration and biological replication, and growth, biomass, cell size, pigments, and lipid accumulation were measured using standard analytical methods for pigment and lipid quantification. Under controlled light and temperature conditions, AMPEP supplementation enhanced growth performance. Highest cell densities, specific growth rate, biomass, and lipid accumulation were observed in GP-B (p<0.05), while cell size and carotenoids increased significantly in AMPEP-treated groups (p<0.05). Chlorophyll a levels did not differ significantly among treatments (p>0.05). AMPEP effectively improves growth and biochemical composition of C. sorokiniana, indicating its potential as a biostimulant for microalgal cultivation. Further studies are recommended to investigate long-term cultivation responses and underlying physiological mechanisms.
Bioproduct Potential of Indigenous Indonesian Euglena gracilis Strains Based on Morphological, Molecular, and Biochemical Characterization Dedy Kurnianto; Andri Frediansyah; Dwi Enny Djoko Setyono; Budi Setiadi Daryono; Eko Agus Suyono
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Abstract

Graphical Abstract Highlight Research 1. Three indigenous Indonesian Euglena gracilis strains were identified based on a morphological and molecular approach through the ITS2 region. 2. E. gracilis IDN 22 exhibited the highest specific growth rate. 3. E. gracilis IDN 22 produced the highest amounts of biomass, protein, paramylon, and lipids under the tested conditions, making it the most promising strain. 4. Euglena gracilis IDN 22 exhibited the highest DHA content among the three strains. DHA is an omega-3 fatty acid that has significant potential as a functional food ingredient.   Abstract Acidophilic microalgae represent a promising source of novel food ingredients due to their unique biochemical properties. This study aims to identify and screen the indigenous tropical Euglena gracilis strains from three Indonesian aquatic habitats, evaluating their growth, nutritional profiles, and fatty acid composition to assess their potential. Three E. gracilis strains (IDN 1, IDN 22, and IDN 40) were isolated from Indonesian aquatic habitats and characterized using morphological and ITS2 molecular analyses. Growth performance was determined by cell counting, biomass production by gravimetric analysis, protein content using the Bradford assay, lipid content following the Bligh and Dyer method, and fatty acid composition by gas chromatography with flame ionization detection (GC-FID). This study is the first to integrate morphological, molecular (ITS2), and biochemical characterization to evaluate native Indonesian E. gracilis strains comprehensively. Among these strains, IDN 22 was the most superior. This strain exhibited a growth rate of 0.202 ± 0.006, a biomass yield of 0.558 ± 0.072 g/L, a protein content of 520.171 ± 12.324 µg/mL, a lipid accumulation of 15.33 ± 0.015%, and a paramylon concentration of 51.0 ± 1.80%. While total fatty acid content ranked as IDN 1 < IDN 22 < IDN 40, IDN 22 notably produced the highest levels of docosahexaenoic acid (DHA) among the three strains. These findings establish a scientific basis for selecting superior indigenous E. gracilis strains and demonstrate the potential of integrated strain characterization to support the development of functional foods, nutraceuticals, and other sustainable microalgal bioproducts.  
Predictive Mapping of Bioactive Peptides from Terasi and Identification of Antidiabetic Peptide Candidates Using an Integrated In Silico Workflow Jariyah Jariyah; Naurahyani Syifa Salsabila; Dina Mustika Rini; Muhammad Alfid Kurnianto
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Graphical Abstract Highlight Research 1. Integrated in silico framework successfully identified antidiabetic peptides from Indonesian shrimp paste (terasi). 2. Shrimp proteins, particularly myosin, actin, and haemocyanin, were predicted as major bioactive peptide precursors. 3. Microbial enzymatic hydrolysis generated peptides with high predicted bioactivity and DPP-IV inhibitory potential. 4. Novel terasi-derived peptides showed favorable safety profiles and stable interactions with the DPP-IV receptor. 5. This study provides molecular insights into fermented seafood as a source of functional antidiabetic ingredients.   Abstract The increasing prevalence of Type 2 Diabetes Mellitus has encouraged the exploration of safer therapeutic alternatives, including food-derived bioactive peptides (BAPs) with antidiabetic potential. Indonesian shrimp paste (terasi), a traditional fermented seafood product, is a promising source of BAPs generated through microbial protein hydrolysis. However, systematic identification of antidiabetic peptides from terasi remains limited. This study aimed to predict, identify, and characterize potential antidiabetic BAPs from terasi using an integrated in silico approach, focusing on DPP-IV inhibitory peptides and their molecular interactions. Shrimp-derived protein sequences associated with terasi fermentation were analyzed through an in silico framework. Major protein precursors were subjected to simulated enzymatic hydrolysis using microbial proteases, followed by bioactivity screening, peptide mapping, antidiabetic activity prediction, toxicity and physicochemical assessment, and molecular docking against DPP-IV using AutoDock Vina and GNINA. Myosin, actin, and haemocyanin were identified as major BAP precursors. Microbial enzymatic hydrolysis generated peptides with higher predicted bioactive densities (85.94–89.65%) than non-specific contaminant enzymes (79.05–83.55%). BIOPEP-UWM analysis showed that antidiabetic activity was the dominant predicted function, mainly associated with DPP-IV inhibition (0.269–0.395). Further screening identified promising peptides (VPPHL, PHAIL, ALPPGV, and MAMMAG) with favourable safety profiles, physicochemical properties, and stable interactions within the DPP-IV catalytic pocket. Terasi represents an underexplored source of potential antidiabetic peptides. Further validation through peptide synthesis, in vitro DPP-IV inhibition assays, and biological studies is required to confirm their efficacy and functional food applications.
Microbial-mediated Relationship between Water Quality and Oxidative Stress in Whiteleg Shrimp Cultured in the Biofloc Technology System Evellin Dewi Lusiana; Mohammad Mahmudi; Asus Maizar Suryanto Hertika; Muhammad Musa; Sunadji Sunadji; Alfina Pagita Larasati
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Graphical Abstract Highlight Research 1. Physicochemical water quality parameters, particularly transparency, pH, and nitrite, exerted stronger direct effects on superoxide dismutase (SOD) activity in whiteleg shrimp (Penaeus vannamei) than indirect effects mediated through microbial community in the biofloc technology (BFT) system. 2. The phytoplankton community in the BFT ponds was consistently dominated by Bacillariophyceae across the entire 90-day culture period, while total bacterial abundance peaked at day 60 and declined at day 90, indicating temporal succession and maturation of the microbial community. 3. SOD activity increased progressively from DOC 30 to DOC 90, reflecting an enhanced antioxidant defense response in shrimp as cumulative environmental stress intensified throughout the culture cycle. 4. Path analysis integrated with principal component analysis (PCA) revealed that microbial community (total bacteria and phytoplankton) provided only weak direct and indirect mediation of oxidative stress response, suggesting that maintaining physicochemical water quality stability is the primary strategy for reducing oxidative stress response in BFT-based shrimp culture.   Abstract Biofloc technology (BFT) is increasingly used in intensive whiteleg shrimp (Penaeus vannamei) aquaculture to improve water quality, shrimp health, and system sustainability by promoting microbial biomass. However, the complex interactions among water quality, microbial community, and oxidative stress responses that reflect shrimp health remain poorly understood. This research aims to evaluate the relationships between water quality dynamics and oxidative stress responses in whiteleg shrimp, while accounting for the microbial community present in the BFT system. An observational (non-experimental) field study was conducted in three biofloc ponds (2 m diameter; 500 shrimp m⁻²) in Probolinggo, Indonesia, over a 110-day culture cycle. Principal component analysis (PCA) reduced the dimensionality of water quality variables, followed by path analysis of their direct and indirect effects on SOD mediated by the microbial community. Transparency, pH, and nitrite deviated from the recommended ranges, indicating suboptimal rearing conditions that act as potential stressors. Bacillariophyceae consistently dominated the phytoplankton community, total bacterial abundance peaked at day 60 and declined at day 90, and SOD activity increased steadily. Path analysis showed that water quality influenced SOD more strongly through direct than microbially mediated pathways. Physicochemical water quality is the principal driver of the oxidative stress response in BFT-based shrimp culture, whereas the microbial community exerts weak direct and indirect effects. The community may modulate antioxidant capacity, but it did not fully buffer shrimp against physicochemical stress. Future research should include additional biomarkers, such as catalase and malondialdehyde, for a more comprehensive evaluation of shrimp health.
Microplastic Contamination in Traditionally Produced Sea Salt of Watu Asa Village, Central Sumba Umbu Paru Lowu Dawa; Andi Kurniawan; Asep Awaludin Prihanto; Abu Bakar Sambah
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Graphical Abstract Highlight Research 1. Microplastic abundance and polymer profiles were evaluated in traditional brine and boiled sea salt. 2. A sharp surge in particle concentration was confirmed during the transformation from brine to solid salt crystals. 3. Microscopic analysis revealed that fibre structures were the most dominant shape across all sampling stages. 4. FTIR spectroscopy successfully fingerprints synthetic polymers, including polyethylene and polyacrylonitrile.   Abstract Microplastic contamination has emerged as a growing environmental concern in coastal ecosystems and poses potential risks to food safety through its accumulation in sea salt. Traditional salt production systems are particularly vulnerable to contamination by marine debris; however, information on microplastic occurrence in traditionally boiled sea salt produced using saline–soil filtration systems remains limited. Therefore, this study aimed to investigate the abundance, morphological characteristics, and polymer composition of microplastics in brine and crystallised sea salt traditionally produced in Watu Asa Village, Central Sumba, East Nusa Tenggara, Indonesia. A descriptive-exploratory study employing purposive sampling was conducted in a traditional salt production system. Brine samples were collected from saline-soil filtration units prior to boiling, while salt crystal samples were obtained after the brine-boiling process. Microplastics were isolated through density separation and oxidation using 30% H₂O₂, followed by morphological characterisation under an optical microscope at 40× magnification. Polymer identification was performed using Fourier-transform infrared spectroscopy (FTIR). The results revealed a substantial increase in microplastic concentration during the conversion of brine into salt crystals. Microplastic abundance increased from 285 ± 17.32 particles L⁻¹ in the filtered brine to 35,000 ± 2,500 particles kg⁻¹ in the boiled salt crystals. Fibres were the dominant microplastic morphology in all samples, followed by fragments and films. FTIR analysis confirmed the presence of several synthetic polymers, including polyethylene (PE), polypropylene (PP), polyethylene terephthalate (PET), and polyacrylonitrile (PAN). The hydroxyl signal (3328.90 cm-1) previously assigned to poly(vinyl alcohol) (PVA) was reclassified as surface-bound moisture and weathering-induced oxidation products. Polyurethane (PU) was excluded as it was not detected in the confirmed spectral library matching. In conclusion, the traditional brine-boiling process concentrates microplastics in the final salt product, potentially increasing consumer exposure to microplastic contamination. Further research should evaluate practical filtration technologies for reducing microplastic loads during brine processing and assess the long-term implications of microplastic ingestion through traditionally produced sea salt.    

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