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Journal of Fisheries & Marine
Published by Universitas Airlangga
ISSN : 20855842     EISSN : 25280759     DOI : https://doi.org/10.20473/jipk.v16i1.44436
Core Subject : Science,
Biochemistry, Genetics & Molecular Biology
Jurnal Ilmiah Perikanan dan Kelautan (JIPK; English: Scientific Journal of Fisheries and Marine) ISSN International Centre | ISSN:2528-0759 (Online) | ISSN: 2085-5842 (Print) JIPK is a peer-reviewed and open access biannually (April and November) that published by the Faculty of Fisheries and Marine, Universitas Airlangga. The aim of JIPK is to publish exciting, empirical research, recent science development, and high-quality science that addresses fundamental questions in fisheries and marine. JIPK only accepts manuscripts written in full English and processes submitted original script related of scope to fisheries and marine science and not being published by other publishers. We publish four categories of papers; 1) Original research papers, 2) Critical review articles, 3) Short communications, and, 4) Special Issue on applied or scientific research relevant to freshwater, brackish and marine environments. This journal gives readers the state of art of the theory and its applications of all aspects of fisheries and marine science. The scope of this journal includes, but is not limited to the research results of: Aquaculture, Fish Diseases, Marine science, Oceanography, Aquatic resources management, Fisheries product technology, Fish capture, technology, Fishery agribusiness, Fishery biotechnology/molecular genetics, Fish health management. JIPK has been indexed in Scopus, DOAJ, Sinta 1, Dimensions, Crossref, and others indexing. This journal has been accredited as a 1st Grade Scientific Journal (Sinta 1) by the Ministry of Research, Technology, and Higher Education of Indonesia since 8 December 2020.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia
Articles 582 Documents
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Front Meter Vol 18 No 1 Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 1 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Abstract

Back Meter Vol 18 No 1 Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 18 No. 1 (2026): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Effect of Dietary Probiotic Lactococcus garvieae JAL37 Supplementation on Growth and Disease Resistance in Tor tambroides Challenged with Aeromonas hydrophila PTF3 Mahasin, Faiz; Istiqomah, Indah; Handayani, Desy Putri; Isnansetyo, Alim; Murwantoko, Murwantoko; Herath, Tharangani
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.82534

Abstract

Graphical Abstract Highlight Research 1. Aeromonas hydrophila PTF3 was identified and analysed as a causative agent of a previously identified hemorrhagic syndrome in Tor tambroides. 2. Lactococcus garvieae JAL37 supplementation in feed can enhance the growth of Tor tambroides fingerlings. 3. Lactococcus garvieae JAL37 can increase the resistance of Tor tambroides fingerlings to Aeromonas hydrophilla PTF3. 4. Relative mRNA levels of ghrelin, GH, and I-FABP genes were increased after 90 days of tor cultivation with Lactococcus garvieae JAL37 supplementation.   Abstract  Mahseer, or tor fish, an indigenous Asian fish of great socio-economic value, is gaining attention as it faces threats to its survival. However, slow growth rates and disease susceptibility remain significant challenges in mahseer cultivation. Feed supplemented with probiotic Lactococcus garvieae JAL37 at a concentration of 1.0 × 10⁸ CFU/g feed, twice weekly, was used in this study to evaluate its effects compared with a control. Triplicate groups of Tor tambroides fingerlings (average weight 1.86 ± 0.09 g) were cultivated for 90 days. Parameters such as growth, intestinal histology, and mRNA expression levels of growth-related genes (ghrelin and I-FABP from the intestine; GH and IGF-1 from the liver) were assessed. Day 90 post-cultivation, mahseer were challenged with an oral infection of Aeromonas hydrophila at 5.0 × 105 CFU/g fish to assess survival rate and mRNA expression levels of pro-inflammatory cytokine-related genes (TNF-α and IL-1β). Weight gain, specific growth rate, and villus length in Tor tambroides fingerlings treated with probiotics showed significant increases (P<0.05). Real-time PCR results indicated upregulated mRNA expression of ghrelin, I-FABP, and GH genes in the probiotic group, whereas IGF-1 gene expression was similar to that in the control group. Probiotic treatment significantly improves the survival rate of T. tambroides after A. hydrophila challenge, while suppressing mRNA expression of TNF-α and IL-1β genes post-challenge. These findings suggest that Lactococcus garvieae JAL37 supplementation can promote growth in Tor tambroides fingerlings and enhance disease resistance against Aeromonas hydrophila.
Morphological and Molecular Characteristics of Pufferfish Using DNA Barcode COI Gene at Camplong Beach, Madura, Indonesia Adam Dwi Rangga; Viona Angelina Erlan Panjaitan; Endik Deni Nugroho; Rahayu, Dwi Anggorowati; Cahya Ajeng Valentina Sulung; Rusdianto, Rusdianto; Noorhidayah Binti Mamat
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.82924

Abstract

Graphical Abstract Highlight Research 1. Combining DNA barcoding with morphological variation analysis can enhance the accuracy of Pufferfish species identification. 2. This is the first study to examine the genetic diversity and phylogenetic relationships pufferfish from Madura, East Java, using partial COI sequences. 3. DNA barcoding confirms the morphological identification of this group (96%-100%) 4. The reliability using targeted DNA barcoding and phenetic taxonomy to study genetic variation and identify species differences in pufferfish.   Abstract Pufferfish are one of the most common fish species in the ocean particularly in Camplong Beach, Madura. Despite the abundant nature, there isn’t much information on this species in East Java, showing the need for identification. Therefore, this study sought to identify pufferfish species in Sampang Regency through morphological and molecular characterization utilizing DNA barcoding of the COI gene. Fins were kept in 96% absolute ethanol, and DNA extraction, polymerase chain reaction (PCR), and sequence analysis were performed using bioinformatics tools, including the BOLD system and the web-based Automatic Barcode Gap Discovery (ABGD) tool. To strengthen genetic study, phenetic taxonomy was again applied using Ntysc. Morphological identification revealed five distinct species of pufferfish, namely Chelonodontops patoca, Lagocephalus spadiceus, Arothron reticularis, Otracion rhinorhynchos, and Cyclichthys orbicularis. The high haplotype diversity (Hd) of 0.9 and nucleotide diversity (π) of 0.2 indicated substantial genetic variation. There were 11 polymorphic sites, and the overall ts/tv ratio was 2.2. The frequency of parsimonious informative sites was 21.6%. The phylogenetic tree displayed distinct branching patterns among species. Morphological and molecular identification data supported these results, demonstrating that five distinct pufferfish species occur at Camplong Beach in the Sampang District of Madura.
Enhancement of Skin Pigmentation and Intestinal Health in Comet Goldfish (Carassius auratus) Using Dunaliella salina Teodoresco 1905 Supplemented Diets Iba, Wa; Martono, Martono; Syam, Rukman Awan; Ruslaini, Ruslaini; Abidin, La Ode Baytul; Kurnia, Agus; Nur, Indriyani; Rice, Michael A
Jurnal Ilmiah Perikanan dan Kelautan 2026: JIPK VOLUME 18 ISSUE 2 YEAR 2026 (JUNE 2026, ISSUE IN PROGRESS)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.83250

Abstract

Graphical Abstract Highlight Research 1. Dunaliella salina meal (7–9%) optimally enhanced skin carotenoid deposition in C. auratus. 2. Higher D. salina inclusion improved intestinal morphology and reduced inflammatory lesions. 3. Intestine somatic index stabilized at 7–9%, indicating better digestive efficiency. 4. Survival rates increased with D. salina supplementation due to antioxidant and immunoprotected effects. 5. Microalgal carotenoids show strong potential as functional additives for ornamental fish feed.   Abstract Maintaining efficient and stable carotenoid-based pigmentation remains a challenge in aquaculture due to limited dietary carotenoid bioavailability and variable intestinal absorption. Comet goldfish (Carassius auratus) were used as a model species for aquaculture nutrition and digestive physiology to evaluate the effects of natural carotenoid supplementation from microalgae Dunaliela salina on skin pigmentation and intestinal health. This study aims to determine the effect of D. salina meal addition in formulated feed on the carotenoid content of fish skin, growth and survival as well as the intestinal condition of comet gold fish. Experimental diets were prepared by incorporating D. salina meal into a formulated feed at graded inclusion levels (0, 3, 5, 7, and 9%), where the microalgal meal was homogenized with other feed ingredients, pelleted, and oven-dried before use. The initial weight of experimental fish was 4 ± 1 g. The fishes were maintained in aquarium measuring of 40 × 35 × 35 (l × w × h) cm for 30 days and fed until satiation with 5 treatments of formulated feed added microalgae meal at 0, 3, 5, 7 and 9 %.  Commercial feed was used as control feed and all treatments were in triplicates. The highest final carotenoid content in skin of comet fish at 14.82 mg. g-1 was obtained with addition of 7 % microalgae meal.  The highest weight gain was obtained with addition of 5 % microalgae meal at 5.5 g.  Normal comet fish intestinal morphology was found in those feds on 9 % microalgae meal. Intestinal inflammation was observed in those feds with the addition of 3, 5 and 7 % microalgae meal and control feed.  The intestinal somatic index (ISI) value obtained was 1.08-3.06 %.  The survival was 100 % in fish fed with the addition of microalgae meal at high percentage from 5-9%. The findings provide practical guidance for developing natural, microalgae-based functional feeds that improve pigmentation efficiency, support intestinal health, and enhance survival, thereby contributing to more sustainable and economically valuable aquaculture production.  We recommend to use 7-9 % of D. salina meal for use in aqua feed to maintain optimal color, growth and survival of ornamental fish or cultured finfish in general.
Biodiversity and DNA Barcoding of Seagrass in Equatorial Latitudes Regional Representation of Tropical Indonesia Would Improve Clarity, Structure, and Scientific Precision Subur, Riyadi; Akbar, Nebuchadnezzar; Abubakar, Salim; Ismail, Firdaut; Paembonan, Rustam E; Subhan, Beginer; Arafat, Dondy; Irfan, Muhammad
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.83915

Abstract

Graphical Abstract Highlight Research 1. This research provides initial and current information regarding seagrass on small islands right on the equator. 2. directly depicts the diversity, density and cover of seagrass in a unique region, namely a small island crossed by the equator. 3. The environmental conditions of marine waters in seagrass areas on islands crossed by the equator have been described. 4. The latest information specifically describing seagrass and the ecology of equatorial marine environments. Essential for the development of future knowledge and technology. 5. DNA barcoding was capable of resolving field identification challenges and providing taxonomic clarification based on DNA sequence data.   Abstract The equator is a hypothetical line that separates the general region from the world.  Complete information on coastal ecosystems has not been provided for seagrass in the equatorial latitudes. Seagrass is dynamically distributed throughout the equatorial latitudes. The area that the equatorial latitudes also traverse is known as the indotropic region. Eastern Indonesia's Kayoa Island is situated directly on the equator.  A problem, namely how is the biodiversity of seagrass in the equatorial region. There are no published research on seagrass, particularly on biodiversity. The aim of this study is to reveal the diversity of seagrass in equatorial latitudes on the small islands. The methodology in this study was purposive sampling with a quadrant line transect was used to obtain the samples.  In situ identification of seagrass species was done.  Seagrass samples were taken from the leaves for DNA analysis purposes. Leaf samples were analyzed molecular in the laboratory. To determine the distribution of seagrass ecology and environmental were subjected to PCA analysis. The results found that six species of seagrass.  It has been discovered that seagrass may grow and develop in the tropical region under typical environmental conditions.  Despite the fact that six species were discovered, diversity was limited.  In this region, seagrass cover is typically high and supports a healthy species density.  In general concluded that diversity and density are low but cover is still quite good. DNA barcoding has revealed differences in morphological identification.This discovery represents preliminary data that can be investigated further in subsequent studies.    
Extraction, Purification, and Bioactivity of Fucoxanthin from Brown Seaweed Sargassum hystrix Mufarocha, Nungky; Husni, Amir; Putra, Masagus Muhammad Prima
Jurnal Ilmiah Perikanan dan Kelautan 2026: JIPK VOLUME 18 ISSUE 2 YEAR 2026 (JUNE 2026, ISSUE IN PROGRESS)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.84197

Abstract

Graphical Abstract Highlight Research 1. UAE at 45°C for 30 min produced the highest crude extract yield (19.90%). 2. Ethyl acetate:n-butanol (8:2) yielded the highest fucoxanthin fraction (1.31 mg/g). 3. Fucoxanthin fractions showed strong antioxidant activity (DPPH IC₅₀ 86.18±5.06 µg/mL). 4. Purified fractions exhibited strong tyrosinase inhibition (IC₅₀ 76.04±3.24 µg/mL).   Abstract Fucoxanthin is the major carotenoid present in brown seaweeds and exhibits strong biological activities, particularly as an antioxidant and anti-aging agent. However, efficient extraction and purification conditions for fucoxanthin from Sargassum hystrix, along with its functional evaluation, remain limited. This research aimed to establish the most effective extraction conditions for obtaining fucoxanthin from S. hystrix using Ultrasound‑Assisted Extraction (UAE), determine the optimal solvent system for purification, and evaluate the antioxidant and anti-aging activities of both the extracted and purified fucoxanthin. Extraction was carried out using UAE with 96% ethanol at temperatures of 35–45°C and durations of 20–30 min. Purification was conducted through column chromatography using three solvent systems: n‑hexane:acetone (6:4 v/v), methanol:chloroform (7:3 v/v), and ethyl acetate:n‑butanol (8:2 v/v). Fucoxanthin was identified by thin-layer chromatography and fucoxanthin was quantified using reversed-phase high-performance liquid chromatography (HPLC) equipped with a C18 column, while antioxidant activity was measured using the DPPH method and anti-aging activity was assessed via tyrosinase inhibition. The results showed that optimal extraction occurred at 40–45°C for 25–30 min, yielding 18.33–19.9% crude extract, and the ethyl acetate:n‑butanol (8:2 v/v) system produced the highest fucoxanthin fraction yield (8.26–9.54%), with fraction F22 containing the highest fucoxanthin level at 1.31 mg/g. The fucoxanthin fraction displayed markedly enhanced activity, with strong antioxidant capacity (IC₅₀ = 86.18±5.06 μg/mL, an 83.8% improvement over the crude extract) and strong tyrosinase inhibition (IC₅₀ = 76.04±3.24 μg/mL). Overall, fucoxanthin derived from S. hystrix demonstrates substantial promise as an active antioxidant and anti-aging compound for nutraceutical and cosmetic applications, suggesting that future studies should focus on scaling up the extraction and purification process and further elucidating its mechanisms of action and stability in formulated products.  
Liquid Smoke as a Biofertilizer and Ice-Ice Disease Suppressant in the Cultivation of Kappaphycus striatus Ensano, Fatima Nhidzlah T; Robles, Rizal Jhunn F; Sarri, Jurmin H; Amlani, Merilyn Q; Yangson, Nour Aley T; Jalaidi, Noriam L; Yangson, Nour Mahdey T
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.85504

Abstract

Graphical Abstract Highlight Research Liquid smoke improved growth and biomass of Kappaphycus striatus. A concentration of 2.67 mL L⁻¹ yielded the highest specific growth rate and weight gain. All treatments maintained 100% survival throughout the culture period. Liquid smoke reduced ice-ice disease incidence, indicating biostimulant potential.   Abstract Liquid smoke (LS) is an organic product derived from the condensation of natural wood smoke and is widely applied in agriculture as a fertilizer, growth enhancer, and disease-control agent. However, its potential application in seaweed farming, particularly for improving growth performance and mitigating ice-ice disease, remains poorly explored. This study aimed to evaluate the effects of different liquid smoke concentrations on the growth performance, weight gain, survival rate, and ice-ice disease occurrence in the cultured macroalga Kappaphycus striatus. A 45-day culture experiment was conducted under controlled conditions using a Randomized Completely Block Design (RCBD) with five treatments in triplicate: a control without liquid smoke (T1) and four liquid smoke concentrations, 0.67 mL L⁻¹ (T2), 1.33 mL L⁻¹ (T3), 2.00 mL L⁻¹ (T4), and 2.67 mL L⁻¹ (T5). Liquid smoke treatments were prepared by dissolving the required volume in seawater, and seaweed seedlings were soaked in the respective solutions for 10 minutes and covered overnight before deployment. Higher liquid smoke concentrations significantly enhanced seaweed performance. The highest concentration (2.67 mL L⁻¹) resulted in the greatest specific growth rate (5.70 ± 0.04% day⁻¹), which was significantly higher (p<0.05) than the control (3.41 ± 0.16% day⁻¹), and produced the highest weight gain (207.94 ± 1.96 g). Survival remained at 100% across all treatments, while ice-ice disease incidence was markedly reduced in higher liquid smoke treatments, decreasing from 28.00 ± 0.00% in the control to 6.00 ± 0.00% at the highest liquid smoke concentration, with improvements observed as early as day 15. Liquid smoke, particularly at a concentration of 2.67 mL L⁻¹, effectively enhances growth performance, biomass production, and disease resistance in Kappaphycus striatus. Further studies under field conditions are recommended to validate its long-term effectiveness and practical application in commercial seaweed farming.
Assessment of Fish Floating Net Cage Conditions Using ROV and Deep Learning Algorithms Lestari, Nurhaliza Amalia; Jaya, Indra
Jurnal Ilmiah Perikanan dan Kelautan 2026: JIPK VOLUME 18 ISSUE 2 YEAR 2026 (JUNE 2026, ISSUE IN PROGRESS)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v18i2.85796

Abstract

Graphical Abstract Highlight Research 1. This study demonstrates the successful use of a self-developed Remotely Operated Vehicle (ROV) to acquire underwater imagery for monitoring floating net cage conditions without the need for manual diving. 2. The integration of ROV-based image acquisition with deep learning classification using the YOLOv8 model achieved high accuracy in identifying different levels of net fouling under real aquaculture field conditions. 3. The results show that classification performance decreases as the number of fouling classes increases, influenced by visual similarity between classes, environmental variability, and limited image distribution. 4. The proposed approach provides an effective, non-invasive, and practical monitoring solution that supports timely maintenance decisions and contributes to more sustainable management of floating net cage aquaculture systems.   Abstract Monitoring the condition of floating net cages (FNC) is essential for maintaining water circulation, dissolved oxygen availability, and overall fish health in aquaculture systems. However, FNC-based aquaculture commonly faces the problem of biofouling accumulation, including barnacles, algae, sediment, dirt, and solid waste, which gradually obstruct water flow and reduce cage performance. This study aimed to develop an automated method for classifying floating net cage fouling conditions by integrating a self-developed remotely operated vehicle (ROV) with deep learning–based underwater image classification. Underwater monitoring produced 7,156 extracted image frames, which were processed through image selection and white balance color correction. A total of 741 images were used to train a YOLOv8 model under three classification schemes, namely 2-class, 3-class, and 6-class classifications. The results demonstrated high classification performance across all schemes, with accuracy values of 100% for the 2-class model, 99% for the 3-class model, and 98% for the 6-class model. These findings indicate that integrating ROV-based image acquisition with deep learning classification provides an effective approach for assessing floating net cage conditions, enabling timely maintenance, improving monitoring efficiency, and supporting better environmental management in aquaculture systems. Future studies are encouraged to expand the dataset size and environmental variability to further enhance model robustness.
Mapping of Scad Fish (Decapterus sp.) Fishing Grounds Based on the Suitability Level of Oceanographic Parameters in FMA 573 Simbolon, Domu; Apriela, Huryn Najmi; Taurusman, Am Azbas; Aprianti , Eka
Jurnal Ilmiah Perikanan dan Kelautan 2026: IN PRESS ISSUE (JUST ACCEPTED MANUSCRIPT, 2026)
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

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Abstract

Graphical Abstract Highlight Research 1. Integration of multi-variable oceanographic parameters for mapping fishing areas. 2. Spatial-temporal dynamics based on changes in oceanographic parameters. 3. Development of upwelling index-based fishing area detection methods. 4. Optimization of fishermen's operations through the prediction of potential locations.   Abstract Sustainable management of scad stocks (Decapterus sp.) in FMA 573 necessitates integrating satellite-based oceanographic monitoring to identify distribution zones amid complex aquatic dynamics. This study integrates satellite imagery, descriptive analysis, and spatial modeling to map oceanographic parameters and identify fish distribution zones, aimed at enhancing the monitoring and sustainable management of scad stocks in FMA 573. The research combines satellite-based oceanographic monitoring with CPUE analysis and spatial modeling to determine fish distribution based on environmental suitability. Results indicate that oceanographic conditions fluctuate seasonally, with warm waters dominating the West Monsoon and Transition-1, while higher salinity and Chl-a concentrations characterize the later seasons. Habitat suitability modeling reveals that scad potential is primarily concentrated in coastal areas during the West Monsoon and Transition-1. The spatial distribution of the scad in FMA 573 shows a preference for coastal areas with a strong dependence on oceanographic dynamics. This spatial shift between coastal and offshore zones is primarily driven by the seasonal expansion of optimal SST and Chl-a concentrations, which alter the boundaries of suitable habitats. However, a spatial-temporal discrepancy exists: while environmental suitability peaks early in the year, industrial landing data shows fishing activity concentrated offshore, peak during Transition-2. This mismatch suggests that existing catch data reflects industrial operational habits rather than the full biological potential of nearshore areas, highlighting the need for supplementary data from small-scale fishers to validate coastal PFZs. These findings provide a baseline for predictive catch modeling and seasonal spatial recommendations. Identifying the shift from coastal zones in the West Monsoon to offshore waters in Transition-1 allows for optimized fishing efforts, improved fuel efficiency, and more precise monitoring of fishing pressure.  

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