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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
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Short Communication: Ant (Hymenoptera: Formicidae) diversity as bioindicator of agroecosystem health in northern slope of Mount Slamet, Central Java, Indonesia IMAM WIDHIONO; RIZKITA DINDA PANDHANI; DARSONO DARSONO; EDI RIWIDIHARSO; SLAMET SANTOSO; LUCKY PRAYOGA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180424

Abstract

Widhiono I, Pandhani RD, Darsono, Riwidiharso E, Santoso S, Prayoga L. 2017. Short Communication: Ant (Hymenoptera: Formicidae) diversity as bioindicator of agroecosystem health in northern slope of Mount Slamet, Central Java, Indonesia. Biodiversitas 18: 1475-1480. This study examined the diversity of ant assemblages in two different agroecosystems (organic and intensive farming) with maize as main crops on the northern slope of Mount Slamet, Indonesia from April to August 2015. The response of ant diversity to the different farming systems was evaluated. In total, 359 ants from 17 species in five subfamilies were collected: 13 species from the organic farm and 10 species from the conventional farm. Seven (41%) species were found only on the organic farm, four (23%) species were found only on the conventional farm, and six (35%) species were found on both. The Morisita-Horn similarity index (33%) showed that the similarity of the species composition in the two habitats was low. More individual ants were found on the organic farm than the intensive farm [287 (79.94%) vs. 72 (20.05%) individuals]. The diversity of the ants was affected by the density of weeds with organic farming. Hypoponera sp. had the highest Indicator Value (50.7), followed by Aphaenogaster sp. (28.9), Diacamma sp. (28.2), and Odontoponera sp. (27.6), however only Odontoponera sp can be used as bioindicator. Although the ant diversity was higher with organic farming than with intensive farming, there was no correlation with soil conditions. As a bioindicator, the Indicator Value reflects agroecosystem health better than does ant diversity.
Gene flow and selection evidence of sandalwood (Santalum album) under various population structures in Gunung Sewu (Java, Indonesia), and its effects on genetic differentiation YENI W.N. RATNANINGRUM; SAPTO INDRIOKO; ENY FARIDAH; ATUS SYAHBUDIN
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180427

Abstract

Ratnaningrum YWN, Indrioko S, Faridah E, Syahbudin A. 2017. Gene flow and selection evidence of sandalwood (Santalum album) under various population structures in Gunung Sewu (Java, Indonesia), and its effects on genetic differentiation. Biodiversitas 18: 1493-1505. Field observations on population structures and isoenzyme analysis were conducted to determine gene flow and selection evidence of sandalwood under various population structures in Gunung Sewu, and its effects on genetic differentiation. Sandalwood (Santalum album Linn., Santalaceae) is origin to the south-eastern islands but recently emerged as new landraces in Java Island, Indonesia. Results suggested that (i) natural barriers contributed to habitat fragmentation and disrupted gene flow among populations; (ii) gene flow affected selection processes regarding bottleneck effects and genetic drifts, which determined allelic richness and population diversity; and (iii) variation on gene flow and selection processes affected genetic differentiation among populations. Gene flow restriction and genetic drift occurred when population had lower genetic base, highly clonalized, fragmented, and/or more inbreeding in mating. Genetic differentiation was highest between populations within Timor island, and between Gunung Sewu (Java Island) and Sumba-Timor islands. Populations were not clustered based on geographical sites, but more by the similarity of genetic structures. Genetic differentiations were the combined effect of the differences on genetical processes regarding gene flow and selection events. Both differences existed due to differences on (i) population structures including landscape, clonality and parental genetic composition, and (ii) the disturbance histories of population, which affected the equilibrium between gene flow and drift. These findings emphasized the importance of larger gene flow and genetic base to naturally maintain genetical processes of sandalwood population under various landscapes structures.
Short Communication: Occurrence and cluster analysis of palm oil (Elaeis guineensis) fruit type using two-dimensional thin layer chromatography DENI ARIFIYANTO; MOHAMMAD BASYUNI; SUMARDI SUMARDI; LOLLIE AGUSTINA PANCAWARASWATI PUTRI; ETTI SARTINA SIREGAR; IWAN RISNASARI; INDRA SYAHPUTRA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180426

Abstract

Arifiyanto D, Basyuni M, Sumardi, Putri LAP, Siregar ES, Risnasari I, Syahputra I. 2017. Short Communication: Occurrence and cluster analysis of palm oil (Elaeis guineensis) fruit type using two-dimensional thin layer chromatography. Biodiversitas 18: 1487- 1492. The problems that have been faced by palm oil breeders are the length of time and high costs to discover the type of palm oil (Elaeis guineensis) fruit namely Dura, Pisifera, or Tenera, before using as a seed parent. These conditions are ineffective and add to the cost of maintenance and the production of seedling is more expensive. The present study describes the occurrence and cluster analysis of palm oil fruits using two-dimensional thin layer chromatography (2D-TLC). The leaves and fruit on each fruit mesocarp and shell, commercial seed on each fruit type were sampled through direct determination, plant nurseries, commercial seed and unknown type of palm oil. 2D-TLC chromatograms of hexane extracts showed diversity in palm oil fruits: Dura had ficaprenol-type polyprenol (C50-C60) and no carbon chain-length of polyprenol and dolichols (C85-C100) were found. In Tenera polyprenols of C45-C60 and C90-C100 occurred and dolichols of C85-C105 as well, where polyprenols of C45 and C105 and dolichol of C105 found in Tenera were not detected in Pisifera. To confirm these findings, cluster analysis was drawn using the UPGMA method. The dendrogram demonstrated that the three types of palm oil were grouped to fruit type, suggesting that the occurrence of polyisoprenoids in palm oil fruits were chemotaxonomically significant.
Economic valuation for tembawang ecosystem, in Sanggau District, West Kalimantan, Indonesia EMI ROSLINDA; SITI MASITOH KARTIKAWATI; RABUDIN RABUDIN
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180428

Abstract

Roslinda E, Kartikawati SM, Rabudin. 2017. Economic valuation for tembawang ecosystem, in Sanggau District, West Kalimantan, Indonesia. Biodiversitas 18: 1506-1516. The tembawang ecosystem in West Kalimantan (Indonesia) spreads over especially in Sanggau District region. Tembawang is a system of land used by customary community of Dayak ethnic which is traditionally managed and communally used. The objective of this study is to determine the total economic value (TEV) of the tembawang ecosystem. Survey methods were used in this research. 70 respondents were selected by census method. Total economic values in this research were restricted on direct use value, indirect use value and option value. Based on market price (biomass) and opportunity cost (hydrological role), the economic values were calculated. The results showed that total economic value of Tembawang Ampar was IDR 263,837,082 year-1, which was equivalent to IDR 36,900,291 year-1ha-1. They are IDR 33,545,791 year-1ha-1 from direct use value, IDR 3,072,738 year-1ha-1 from indirect use value, and IDR 281,762 year-1ha-1 from option value. Total economic value of tembawang was rather low. The low of economic value was due to limited benefits assessed in this study. Whereas in fact, there were many benefits from tembawang obtained by the community. Conserving tembawang ecosystem will not be achieved by simply considering the conservation of species in tembawang, but the preservation will need to encompass a wide range of natural resources and the potential services provided by them.
The practice of farming, processing and trading of tobacco by Sukasari people of Sumedang District, West Java, Indonesia JOHAN ISKANDAR; BUDIAWATI S. ISKANDAR; AZRIL AZRIL; RUHYAT PARTASASMITA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180429

Abstract

Iskandar J, Iskandar BS, Azril, Partasasmita R. 2017. The practice of farming, processing and trading of tobacco by Sukasari people of Sumedang District, West Java, Indonesia. Biodiversitas 18: 1517-1527. Tobacco (Nicotiana tabacum L) is an original crop of Cuba, Latin America, discovered by Christoper Columbus in 1492 and introduced to Europe. Moreover, it was distributed to Asia countries, including Indonesia. Local people of Sukasari village, Sukasari sub-district, Sumedang district, West Java, has cultivated tobacco for a long time, since the Dutch colonial, based on local ecological knowledge transmitted by inter-generations. As a result, local people of Sukasari village have rich knowledge on the tobacco. Nowadays, however, since the agricultural lands as well as tobacco farmers have decreased, the local ecological knowledge of the Sukasari people have eroded. This paper elucidates the local ecological knowledge of Sukasari people, Sumedang District of West Java on landraces, cultivation, process, and local trading of tobacco. The method used in this study was qualitative with descriptive analysis applying the ethnoecological approach. The result of the study showed that the Sukasari people have predominantly cultivated four landraces of the tobacco. The cultivation of tobacco include the selecting of seeds, nursery, preparing land, planting, caring, harvesting and processing of tobacco products, requiring diligent efforts and high skill. Today, the cultivation of tobacco has many constrains, such as climate anomalies, decrease of agricultural lands, and the lack of finance; consequently, the tobacco farmers have less enthusiasm to cultivate the tobacco. As a result of decreaase of tobacco cultivation, the local ecological knowledge of the Sukasari people has eroded and may extinct in the near future.
Identification of Aves, Herpetofauna and Arthropods in Miangas Island (Indonesia), the borderline of Wallacea ecoregion ADY SURYAWAN; ISDOMO YULIANTORO; ANITA MAYASARI; MARGARETTA CHRISTI
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180430

Abstract

Suryawan A, Yuliantoro I, Mayasari A, Christita M. 2016. Identification of Aves, Herpetofauna and Arthropods in Miangas Island (Indonesia), the borderline of Wallacea ecoregion. Biodiversitas 18: 1528-1537. Miangas Island is located on the northeast of Wallacea and bordered by the Philippines and it belongs to Talaud archipelago. This study aims to identify the species of terrestrial wildlife in Miangas Island. Observations used the direct encounter method starting at 7:00 to 17:00 pm and they were conducted through four times visits in October and December 2015, April and May 2016. Some species were found, such as 15 species of birds, 3 species of lizards, 1 snake and 1 species of Arthropods. Hirundapus caudacutus and Butastur indicus are migrant bird species. Lamprolepis smaragdina is green and classified as tree climber type. It is included to hybrid lizard type of the Pacific and the Philippines. Based on IUCN database, Eos histrio is classified as endangered group (E), Ducula pickeringii as vulnerable (V) Todirhamphus enigma enigma is classified as near threatened group (NT), Birgus latro is classified as Data deficient (DD), while Butastur indicus, Lanius Schach, Nectarinia jugular plateni, Todirhamphus chloris, Hirundo tahitica, Hirundapus caudacutus, Egretta sacra, Ardea alba, Anthus cervinus, Motacilla cinerea, Cuculus saturatus, Passer Montanus, Ducula pickeringii, Eutropis multicarinata multicarinata, Lamprolepis smaragdina, Emoia caeruleocauda and Laticauda laticauda are classified as low risk (LC).
Land cover changes in the Air Telang Protected Forest, South Sumatra, Indonesia (1989-2013) SYAIFUL EDDY; ISKHAQ ISKANDAR; MOH. RASYID RIDHO; ANDY MULYANA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180431

Abstract

Eddy S, Iskandar I, Ridho MR, Mulyana A. 2017. Land cover changes in the Air Telang Protected Forest, South Sumatra, Indonesia (1989-2013). Biodiversitas 18: 1538-1545. The Air Telang Protected Forest (ATPF) is a mangrove forest in the Banyuasin District, South Sumatra, Indonesia. It has an area of about 12,660.87 ha. In fact, that the ATPF area has been converted into aquacultures, plantations, agricultural lands, settlements and ports during recent decades. The objective of this study is to identify the land cover changes in the ATPF from 1989 through 2013 using satellite remote sensing data. Three Landsat satellite imageries for 1989, 2001 and 2013 have been used to build maps and to predict the land cover changes in the study area. A ground-truthing verification was done to increase the accuracy of image classification in each region. The results showed that the anthropogenic forcing had caused significant degradation of primary mangrove forest in the ATPF from 1989 to 2013. This forcing was categorized as mangrove conversion into coconut plantations, oil palm plantations, aquacultures, farms, ports, and settlements. Of these six conversions, the coconut plantations, oil palm plantations and aquacultures have potential tendencies to increase construction that could threaten the existence of mangrove forest in ATPF. It was found that during 2013, the coconut plantations, oil palm plantations, and aquacultures accounted for about 18.0% (2,278.62 ha), 4.7% (591.87 ha) and 3.1% (386.18 ha) of mangrove forest changes, respectively.
Anti-inflammatory activities of ethnomedicinal plants from Dayak Abai in North Kalimantan, Indonesia SWANDARI PARAMITA; KHEMASILI KOSALA; DZULKIFLI DZULKIFLI; DEBY INDAH SAPUTRI; ENGGAR WIJAYANTI
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180433

Abstract

Paramita S, Kosala K, Dzulkifli D, Saputri DI, Wijayanti E. 2017. Anti-inflammatory activities of ethnomedicinal plants from Dayak Abai in North Kalimantan, Indonesia. Biodiversitas 18: 1556-1561. Inflammation is a normal process in the human body as a response to injury from the healing process. Meanwhile, chronic inflammation will cause new health problems to patients. Antiinflammatory drugs generally used for those conditions, have several side effects to patients. The objective of this research was to find alternative anti-inflammatory drugs, especially from natural sources. Three medicinal plants recorded from Dayak Abai in North Kalimantan, Indonesia for health problems caused by the inflammation process i.e. Amomum xanthophlebium Baker, Clerodendrum buchananii (Roxb.) Walp., and Donax canniformis (G.Forst.) K.Schum. were used as material in this research. The experimental method using carrageenan-induced rat paw edema was used followed by the resulting measurement using plethysmometer. The results showed that significant differences of AUC (area under the curve) with p = 0.001 (p < 0.05) were achieved between negative control, positive control, and treatment group with plant medicinal extracts. AUC of leaves ethanol extract of C. buchananii showed the strongest antiinflammatory activities. It could be concluded that the medicinal plants recorded from ethnomedicinal data from Dayak Abai in North Kalimantan, have anti-inflammatory activities, with C. buchananii as the most potential ones which could be further developed as a new source of the anti-inflammatory drug.
The distribution and variability of chlorophyll-a bloom in the southeastern tropical Indian Ocean using Empirical Orthogonal Function analysis ISKHAQ ISKANDAR; QURNIA WULAN SARI; DEDI SETIABUDIDAYA; INDRA YUSTIAN; BRUCE MONGER
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180432

Abstract

Iskandar I, Sari QW, Setiabudidaya D, Yustian I, Monger B. 2017. The distribution and variability of chlorophyll-a bloom in the southeastern tropical Indian Ocean using Empirical Orthogonal Function analysis. Biodiversitas 18: 1546-1555. The Indian Ocean Dipole (IOD) events cause anomalously strong upwelling along the sourthen coast of Sumatra-Java leading to the bloom of chlorophylla. An empirical orthogonal function (EOF) analysis was applied to the time series of the satellite-observed chlorophyll-a, sea surface temperature (SST) and surface winds. Spatial eigen functions of the first EOF mode revealed the broad areas of coherent temporal variation in chlorophyll-a, SST and Ekman pumping, which was observed in the southeastern tropical Indian Ocean (SETIO) region. The corresponding time series of principal component of the first EOF mode revealed a robust seasonal variation and relativley weak inter-annual variation. The second EOF mode exhibited a distinct inter-annual variation with the high surface chlorophyll-a concentration was observed along the southern coast of Sumatra-Java. This high chlorophyll-a concentration is co-located with the low SST, the positive Ekman pumping, and the positive wind-induced mixing. An EOF analysis applied on the seasonal time series showed interesting patterns. The leading EOF mode during the peak IOD season from September to November (SON) showed the high concentration of chlorophyll-a was restricted to the southern coast of Java and was co-located with low SST region. The corresponding time series of principal component of the leading EOF mode showed a significant correlation with the Dipole Mode Index (DMI), however it had no correlation with the Ekman pumping. It could be concluded that the chlorophyll-a bloom during the peak phase of the IOD event was generated by the alongshore upwelling-favorable winds in the preceding season.
Species richness, conservation status, and potential uses of plants in Segara Anakan Area of Sempu Island, East Java, Indonesia SITI NURFADILAH; LIA HAPSARI; ILHAM KURNIA ABYWIJAYA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180435

Abstract

Nurfadilah S, Hapsari L, Abywijaya IK. 2017. Species richness, conservation status, and potential uses of plants in Segara Anakan Area of Sempu Island, East Java, Indonesia. Biodiversitas 18: 1568-1588. Sempu Island is a small Island in Indonesia that has an important functional role as a nature reserve to protect unique landscapes and high plant species richness. Within the Island, one of the most frequently visited areas, Segara Anakan, needs careful attention in order to conserve its plant diversity. The objectives of the present study were to investigate the species richness, conservation status, and potential uses of plants in Segara Anakan, Sempu Island. The aim was to support management of the area and to reveal plants that have potential to be developed for useful products. A total of 77 plant species belonging to 43 families were recorded within the study area. These consisted of trees (55.84 %), shrubs (33.77%), herbs (9.09%) and epiphytes (1.3%). Two species were listed in the IUCN Red List as endangered (Cycas circinalis L. and Myristica teijsmannii Miq.). Plant species in Segara Anakan have many potential uses; namely for staple food, fruits, vegetables, flavouring, beverages, herbal medicines, timbers, ornamental plants, natural dyes, and other uses. The study has implications for biodiversity conservation and management of Sempu Island. Plant species on the IUCN Red List should receive priority in conservation efforts. Data concerning the potential uses of plants can serve as a basis for biodiversity conservation on Sempu Island.

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