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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
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Indigenous Bacillus spp. ability to growth promoting activities and control bacterial wilt disease (Ralstonia solanacearum) YULMIRA YANTI; TRIMURTI HABAZAR; REFLINALDON REFLINALDON; CHAINUR RAHMAN NASUTION; SRIMANO FELIA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180434

Abstract

Yanti Y, Habazar T, Reflinaldon, Nasution CR, Felia S. 2017. Indigenous Bacillus spp. ability to growth promoting activities and control bacterial wilt disease (Ralstonia solanacearum). Biodiversitas 18: 1562-1567. Among the species of Plant Growth Promoting Rhizobacteria, Bacillus spp. has been found to provide beneficial effects to different plant species. Based on our previous research from in planta screening’s method, we found six indigenous strains of Bacillus spp., which had the ability to control bacterial wilt and increased growth and yields of chili. Those were Bacillus subtilis BSn5,q Bacillus sp. RD-AZPVI-03, Bacillus sp. Y81-1, B.cereus strain C38/15, B.cereus strain APSB-03, and B. subtilis strain CIFT-MFB-4158A. This research aimed to characterize the mechanism of selected Bacillus spp. as biocontrol agents of R. solanacearum and as biofertilizer of chili in vitro. We have observed the biocontrol characters (production of HCN, siderophore, biosurfactant, protease, root colonization, and antibiotic), and biofertilizer’s characters (production of Indole Acetic Acid (IAA), ammonia and phosphate solubilization) of Bacillus spp. All strains had ability to produce variable concentrations of IAA, B.subtilis strain CIFT-MFB-4158A can produce siderophore, all isolates cannot produce HCN and biosurfactant, 4 isolates can produce protease. Based on the ability to colonize roots, B.subtilis strain CIFT-MFB-4158A had the best ability to colonize root surface (4.17 x 105 CFU/g root), while B. subtilis BSn5 had the best ability to colonize internal roots (2.08 x 105 CFU/g), and 2 Bacillus strains can suppress R. solanacearum in vitro.
The diversity of locally utilized plants and local botanical knowledge in Central Bengkulu District, Bengkulu Province, Indonesia WIRYONO WIRYONO; JAPRIYANTO JAPRIYANTO; ERNIWATI ERNIWATI
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180436

Abstract

Wiryono, Japriyanto, Erniwati. 2017. The diversity of locally utilized plants and local botanical knowledge in Central Bengkulu District, Bengkulu Province, Indonesia. Biodiversitas 18: 1589-1595. For thousands of years rural communities have derived from their surrounding plants many products to meet their daily life. Maintaining botanical knowledge is, therefore, essential for the sustainability of rural communities. The objectives of this study were to know the diversity of plants utilized by villagers in Tanjung Terdana Village, Central Bengkulu District, Indonesia, and to describe the botanical knowledge of the villagers. Data were collected through interview with two key informants and 64 respondents. The results showed that 75 of plant species were used by villagers for ten purposes, namely medicine (53 species), firewood (41), food (32), construction (23), ornament (8), handycraft (6), hedge (6), custom (6) forage (3), and food coloring (1). On average, respondents could identify 70% of the 50 plants shown to them, and almost all respondents (98%) could identify plants for food. Older respondents spent more time in garden and knew more plant names and uses than the younger ones. Gender or time spent in electronic entertainment did not affect the botanical knowledge. Respondents unfinishing elementary school knew more plants than those finishing schools, may be because they were older. This study implied that activities in the garden can maintain the local botanical knowledge.
Collaborative planning for development of the Pelawan Biodiversity Park in Bangka, Indonesia DIAN AKBARINI; JOHAN ISKANDAR; RUHYAT PARTASASMITA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180438

Abstract

Akbarini D, Iskandar J, Partasasmita R. 2017. Collaborative planning for development of the Pelawan Biodiversity Park in Bangka, Indonesia. Biodiversitas 18: 1602-1610. Pelawan Biodiversity Park is located in the village of Namang, Sub-district of Namang, District of Central Bangka. The Pelawan Biodiversity Park with a size of approximately 47 hectares is intended as a conservation area in Bangka to protect various distinctive plants and animals, especially the plant species Tristaniopsis merguensis (Griff.) Peter G.Wilson & J.T.Waterh. A preliminary review of Pelawan Biodiversity Park management planning was undertaken between January and March 2017. The purpose of this preliminary review was to obtain information for planning and managing the Pelawan Biodiversity Park which has an important function for conservation, ecotourism and research in the Central Bangka District. The method used for the study was qualitative with field data collection; namely observation, intensive interviews with informants and analysis of documentation. The results of the study show that the management planning for Pelawan Biodiversity Park has not been implemented collaboratively with stakeholders. Furthermore, the potential for biodiversity in the Palawan Biodiversity Parks has not been properly analyzed and used to develop strategies for conversation, ecotourism and research. The proposed solution to this deficiency in the planning of the Pelawan Biodiversity Park is to invite relevent stakeholders comprising village government, community leaders, universities, researchers, non-governmental organisations and private organizations to actively collaborate in the process.
Flower morphology, floral development and insect visitors to flowers of Nepenthes mirabilis TRI HANDAYANI
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180441

Abstract

Handayani T. 2017. Flower morphology, floral development and insect visitors to flowers of Nepenthes mirabilis. Biodiversitas 18: 1624-1631. Nepenthes mirabilis Druce is a commercial ornamental pitcher plant belonging to the Nepenthaceae. This species is often used as a parent plant in artificial crossbreeding. The plant is also used in traditional medicine, rope-making, handicraft, and bouquets. Flower development and pollen maturity are important factors in pitcher plant crossbreeding. However, information about its flowering is still lacking. This study aimed to record the flower morphology, flower development, and faunal visitors to male inflorescences of N. mirabilis planted in Bogor Botanic Gardens, West Java, Indonesia. Twelve racemes of flowers were taken as a sample for observing the process of inflorescence development, while ten flowers on each raceme were observed for investigating the flowering pattern of individual flowers. The morphology of flowers, the process of inflorescence development, the flowering pattern for individual flowers, the number of open flowers, the longevity of anthesis, and the appearance of insect (and/or other faunal) visitors to flowers were observed and recorded, using naked eyes, a hand lens, and a camera. Six phases of inflorescence development were identified: inflorescence bud phase, raceme phase, the opening of the raceme-protecting sheath phase, inflorescence-stalk and flowerstalk growth phase, open flower phase and pollen maturity phase. Four phases of flower development were observed: growth of flower bud, the opening of tepals, pollen maturation, and flower senescence. The pattern of anthesis within an inflorescence was acropetal. The number of flowers per raceme was 56 to 163. The peak duration of anthesis of a flower was 11 days (30.7% of flowers). The length of the raceme-stalks was 17-31 cm. The length of the racemes was 23-38 cm. The most common visitors to the flowers were stingless bees, Trigona apicalis.
Use of local Hydromacrophytes as phytoremediation agent in pond to improve irrigation water quality evaluated by Diatom Biotic Indices CATUR RETNANINGDYAH; ENDANG ENDANG ARISOESILANINGSIH; SETIJONO SAMINO
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180439

Abstract

Retnaningdyah C, Arisoesilaningsih E, Samino S. 2017. Use of local Hydromacrophytes as phytoremediation agent in pond to improve irrigation water quality evaluated by Diatom Biotic Indices. Biodiversitas 18: 1596-1602. Irrigation water in Indonesia generally has been polluted because of agricultural, industrial and domestic activity. The aims of this research were to determine the effectiveness of phytoremediation models conducted by planting some local Hydromacrophytes in three phytoremediation ponds through a continuous culture system with water discharge about 0.3 L/seconds for improving the irrigation water quality. The quasiexperimental research was conducted in a phytoremediation pond located in Kepanjen District of Malang, East Java Indonesia. The phytoremediation pond was divided into four interconnected sections. Pond 1 and 2 were planted with some of floating leaf and emergent hydromacrophyte, pond 3 was planted by combinations of same plants added with submerged Hydromacrophytes, while pond 4 was container pond to collecting the water as a result of phytoremediation process. The success of phytoremediation process was known from some physico-chemical parameters of water and some of diatom biotic indices (trophic diatom index/TDI, percentage of pollution tolerant value (%PTV), and Shannon Wiener diversity Index) that was found from artificial substrate been installed in the early treatment. The water quality monitoring performed in each part of the ponds after the plants grew steadily. The results showed that planting of Hydromacrophytes can significantly improve the physico-chemical quality of water. This was reflected in the decline value of conductivity (from 188 μS/cm to 182 μS/cm), turbidity (30 NTU become 8 NTU), total suspended solid (TSS) from 31.3 mg/L to be 5.5 mg/L, nitrates (7.5 mg/L to 3.3 mg/L) and dissolved phosphates (from 0.16 mg./L become 0.04 mg/L) and increasing value of dissolved oxygen (DO) in waters from 2.6 mg/L become 2.9 mg/L. Based on biotic indices there were improvement of the water quality from heavily polluted (diversity index 0.91) become moderately polluted (diversity index 2.07), eutrophic (TDI 52) become mesoeutrophic (TDI 38), and from heavily organic pollution (PTV 93%) to be some organic pollution contribute to eutrophication (PTV 38%). Improvement of water quality was effectively occur after passing through the third pond.
Short Communication: Biodiversity of the Gaga chicken from Pinrang, South Sulawesi, Indonesia based on the bioacoustic analysis and morphometric study ABINAWANTO ABINAWANTO; PIPIH SUNINGSIH EFFENDI
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180440

Abstract

Abinawanto, Effendi PS. 2017. Biodiversity of the Gaga chicken from Pinrang, South Sulawesi, Indonesia based on the bioacoustic analysis and morphometric study. Biodiversitas 18: 1618-1623. Gaga chicken (Gallus gallus domesticus) is the local ornamental chicken originated from South Sulawesi, Indonesia, being kept for the crows. Gaga chicken which also called “ayam ketawa” (“laughing chicken”) has the unique crowing song, which sounds like human laughing. Gaga chicken which has long and fast crowing song is called ‘dangdut’ type, while the short and slow crowing song is named ‘slow’ type. The objective of present study is to investigate the biodiversity of Gaga chicken from Pinrang, South Sulawesi, Indonesia based on morphometric and bioacoustic characters. Twenty samples of Gaga chicken have been collected, consisted of eight ‘slow’ types and twelve ‘dangdut’ types, respectively. Data were analyzed by t-test using SPSS ver. 22. The result showed that ‘slow’ type was bigger than ‘dangdut’ type. Morphometric characters could be applied to determine the biodiversity of Gaga chicken.
Short communication: Seagrass diversity and carbon sequestration: Case study on Pari Island, Jakarta Bay, Indonesia TEGUH HUSODO; SAHBUDDIN DG. PALABBI; OEKAN S. ABDOELLAH; MOHAMAD NURZAMAN; NURULLIA FITRIANI; RUHYAT PARTASASMITA
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180437

Abstract

Husodo T, Palabbi SDG, Abdoellah OS, Nurzaman M, Fitriani N, Partasasmita P. 2017. Seagrass diversity and carbon sequestration: Case study on Pari Island, Jakarta Bay, Indonesia. Biodiversitas 18: 1596-1601. Pari Island is located in Kepulauan Seribu chain. As a tourist destination, the seagrass ecosystem at the island is constantly under pressure from time to time. An effort to prevent widespread damage is to designate parts of the coastline as a limited access research centre. Efforts to study seagrass ecosystem on Pari Island are ongoing, including studies on seagrass' ability to sequestrate carbon. This quantitative study was conducted in December 2014. Surveys are done on the abundance and density of seagrass in 122 plots (area = 50 × 50 cm2) which spread in 6 research stations. Biomass measurements were performed by extractive method on 4 types of seagrass (Cymodocea serrulata, Halophila ovalis, Halodule uninervis and Syringodium isoetifolium). The assessment of seagrass capability in storing carbon has been done by measuring the primary productivity of above ground and below ground, while the amount of carbon released is measured from littered leaves and the leaves eaten by herbivores.The findings show that there are 7 of 12 species of seagrass identified in Indonesia, i.e. Cymodoceae rotundata, Cymodoceae serrulata, Thalassia hemprichii, Enhalus acoroides, Syringodium isoetifolium, Halodule uninervis and Halophila ovalis. The dominant species is Thalassia hemprichii (density 200±153, 261±107 and 117±52 stands/m2) and Halodule uninervis (82±59 stands/m2).Seagrass’ carbon sequestration capacity in the waters surrounding Pari Island, Jakarta Bay, is approximately 0.006-1.048 gC/m2/day whereas carbon reserves are between 0.24-346.10 gC/m2.
Tree growth, mortality and recruitment in four inland tropical dry evergreen forest sites of Peninsular India ELUMALAI PANDIAN; NARAYANASWAMY PARTHASARATHY
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180444

Abstract

Pandian E, Parthasarathy N. 2017. Tree growth, mortality and recruitment in four inland tropical dry evergreen forest sites of Peninsular India. Biodiversitas 18: 1646-1656. Tree diversity was re-inventoried after a decade (2003-2013) for assessing growth, mortality and recruitment rates in four inland tropical dry evergreen forest sites on the Coromandel Cost of India. Four 1-ha square plots (100 m x 100 m) were established in 2003 in four tropical dry evergreen forest sites, i.e. Araiyapatti (AP), Karisakkadu (KR), Maramadakki (MM) and Shanmuganathapuram (SP). These four plots were re-inventoried in 2013 to determine decadal changes in tree diversity. All trees ≥10 cm girth at breast height (gbh) were measured at 1.3 m from the ground level. The initial inventories in 2003 recorded 57 tree species, whereas, in 2013, 56 species were recorded from 46 genera and 26 families. Tree basal area declined by 6.2 % and 3.4 % in sites KR and SP respectively, whereas in the other two sites it increased; AP (1.6 %) and MM (16.8 %). The mean growth rate of trees (≥ 10 cm gbh) in four tropical dry evergreen forest sites ranged from 0.68 to 1.52 cm yr-1. High recruitment rate was recorded in less disturbed sites KR (21.8 % yr-1) and MM (11.5 % yr-1), while the moderately disturbed sites showed 9.1% yr-1in site AP and 5.1 % yr-1 in site SP. Mortality rates were 23.5 and 45.7% yr-1 in highly disturbed sites AP and SP respectively.
Short Communication: Using RAPD technique to evaluate genetic diversity of longan (Dimocarpus longan) population in Vietnam VIET THE HO; QUOC NGUYEN NGO
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180442

Abstract

Ho VT, Ngo QNg. 2017. Short Communication: Using RAPD technique to evaluate genetic diversity of longan (Dimocarpus longan) population in Vietnam. Biodiversitas 18: xxxx. Longan (Dimocarpus longan L.) is an important fruit plant in Vietnam where several cultivars and landraces are being cultivated. Presently, the identification of longan cultivars and landraces is mainly based on personal experience relying on morphological traits leading the difficulty of genetic conservation and longan breeding. In this study, genetic richness and relativeness of 36 longan accessions collected from different provinces in Vietnam were evaluated by using 30 Random Amplified Polymorphic DNA (RAPD) primers. Our results reveal that there is the large variation of genetic background of studied longan accessions with separate groups in the obtained dendrogram. We also identified the combination of different RAPD markers could help to identify 15 longan genotypes. The results from this project could provide valuable information which is necessary for classifying, identifying plant origins, breeding and conserving programs of longan in Vietnam.
Population structure, distribution pattern and microhabitat characteristics of Aglaonema simplex in Pasatan Protected Forest, Jembrana, Bali, Indonesia DEWI LESTARI; NI PUTU SRI ASIH
Biodiversitas Journal of Biological Diversity Vol. 18 No. 4 (2017)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d180446

Abstract

Lestari D, Asih NPS. 2017. Population structure, distribution pattern and microhabitat characteristics of Aglaonema simplex in Pasatan Protected Forest, Jembrana, Bali, Indonesia. Biodiversitas 18: 1663-1668. Aglaonema simplex Blume is one species of Aglaonema that is distributed in Bali, Indonesia. This species can be found in the forests of Jembrana, Karangasem, Tabanan, Buleleng and Bangli. There is no recent data for A. simplex’s population and microhabitat in Bali, while this data is needed to develop future conservation policy. By tracking populations over time, ecologists can see how these populations have changed and may be able to predict how they are likely to change in the future. Monitoring the size and structure of populations can also help ecologists to manage populations. This study was aimed to determine the current condition of A. simplex in the Pasatan forest and to find out the population structure, distribution, and its microhabitat characteristics. The study was conducted along two tracks at Pasatan Forest, Bali on June 9- 11, 2015. Data were collected using the purposive quadrant plot method and analyzed descriptively, tabulated in tables and graphs. The population pattern distribution was as defined by standardized Morisita's index and microhabitat differences in both tracks were determined by the Mann-Whitney test in SPSS 16. The total number of A. simplex was 114 individuals. Thirty-seven percent of plants were juveniles, while 36% were mature plants without fruit and 27% were mature plants with fruit. The population structure along the first track was dominated by a mature population of plants without fruit, while fruiting mature plants dominated the structure of the population along the second track. The distribution of the population along the first track was clustered, while distribution along the second track was uniform. A. simplex was found at an altitude of 367- 448 m asl., oil pH of 6.7-6.8, soil humidity of 73%-84%, air temperature 27°-28° C, air humidity at 80%-86%, with low light intensity of 170-225 lux.

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