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All Journal Natural Science: Journal of Science and Technology Agrotrop : Journal on Agriculture Science Jurnal Bios Logos ILMU KELAUTAN: Indonesian Journal of Marine Sciences Journal of Mathematical and Fundamental Sciences Planta Tropika SUSTINERE: Journal of Environment and Sustainability Biosaintifika: Journal of Biology & Biology Education Jurnal Ekologi, Masyarakat dan Sains Berkala Penelitian Hayati BIOTROPIC Treubia
Sucipto Hariyanto
Department Of Biology, Faculty Of Science And Technology, Airlangga University
Agriculture, Biological Sciences & Forestry Astronomy Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Chemistry Computer Science & IT Earth & Planetary Sciences Energy Environmental Science Immunology & microbiology Materials Science & Nanotechnology Mathematics Medicine & Pharmacology Physics

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KEANEKARAGAMAN JENIS BURUNG PADA BERBAGAI TIPE PEMANFAATAN LAHAN DI KAWASAN MUARA KALI LAMONG, PERBATASAN SURABAYA – GRESIK Hening Swastikaningrum; Sucipto Hariyanto; Bambang Irawan
JURNAL PENELITIAN BIOLOGI BERKALA PENELITIAN HAYATI Vol 17 No 2 (2012): June 2012
Publisher : The East Java Biological Society

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (707.101 KB) | DOI: 10.23869/204

Abstract

The object of this study was to determined the bird species diversity around the estuary region of Kali Lamong located in between Surabaya and Gresik, East Java. Observation was taken three kilometers far, started from Galang Island in Kali Lamong estuary to upstream side of the river. Twelve stations were made along the river as representative type of five land use. Station I and IV represented settlement area. Station II, III, and VIII represented industrial sites, station V and VI represented lawn, and station VII, IX, and X represented aquaculture. Each stations had 20 meter (bulls eye diameter) range or equivalent with 1.256 m2. Every bird in the area was recorded and analyzed by Shannon- Wiener diverity index. The results of this study shown aquaculture area has the highest diversity index (3,19). Followed by lawn (2,52), industrial site (2,39), mangrove forest (2,06), and settlement area (1,67).
Applying Fluorescence Dissolved Organic Matter Spectra and Phytoplankton Biology Index for Assessing Urban River Quality Okik Hendriyanto Cahyonugroho; Sucipto Hariyanto; Ganden Supriyanto
Journal of Mathematical and Fundamental Sciences Vol. 54 No. 3 (2023)
Publisher : Directorate for Research and Community Services (LPPM) ITB

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.5614/j.math.fund.sci.2023.54.3.3

Abstract

The relationship between phytoplankton dynamics and dissolved organic matter (DOM) in aquatic systems based on fluorophore organic matter properties results in poor implementation of methods for water quality monitoring. This study aimed to investigate the relation between fluorophore organic matter and phytoplankton index and to estimate the phytoplankton index by fluorescent organic components for water quality assessment. The research was conducted by sampling urban river water, followed by measuring the biological phytoplankton index and dissolved organic matter during the wet and dry seasons. Fluorescence Excitation Emission Matrices (FEEMs) analysis combined with Parallel Factor (PARAFAC) analysis identified three main components of the fluorescence organic matter, i.e., a fulvic acid-like component (C1) and humic acid-like components (C2 and C3), in the aquatic system, whether in the dry season or the wet season. C1 was mainly generated by phytoplankton species, i.e., Nitzschia sp., Plectonema sp., Navicula sp., and Pinnularia sp., and C2 and C3 had a less significant relationship with phytoplankton species. The diversity of Bacillariophyta had a stronger contribution to the release of DOM than the diversity of Cyanobacteria. The abundance index of a particular phytoplankton species can be used to determine the organic components of FEEM-derived fluorescence organic matter.
The Effect of Organic Nutrient and Growth Regulators on Seed Germination, Embryo and Shoots Development of Dendrobium antennatum Lindl. Orchid by In Vitro Edy Setiti Wida Utami; Sucipto Hariyanto
Biosaintifika: Journal of Biology & Biology Education Vol 8, No 2 (2016): September 2016
Publisher : Department of Biology, Faculty of Mathematics and Sciences, Semarang State University . Ro

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15294/biosaintifika.v8i2.5165

Abstract

Dendrobium antennatum has high economic value as cut flowers and flowerpots. Like orchid seeds in general, D. antennatum is difficult to germinate under natural conditions. This study aimed to determine the effect of coconut water on seed germination and embryo development, as well as the effect of NAA on shoots development of D. antennatum. This study consisted of two stages. In the first stage, the 12 weeks-old seeds after pollination were sown on MS medium containing 2 g/L peptone + 0%; 5%; 10%; and 20% coconut water. After 8 weeks of culture, the seeds germinated and the shoot formed were recorded. The highest in seed germination (92.2%) and the formation of shoots (51.4%) were obtained when seeds were cultured on MS medium containing 2 g/L peptone + 20% coconut water. In the second stage, the shoots were sub-cultured on MS medium containing 1 mg/L thidiazuron + 0 mg/L; 1 mg/L; 2 mg/L; and 3 mg/L NAA. After 16 weeks of sub-culture, the height of plantlets, the length of the roots and leaves, number of leaves and roots formed were recorded. MS medium containing 1 mg/L thidiazuron + 1 mg/L NAA was the most suitable for the shoots development of D.antennatum. The embryo development of D.antennatum in vitro begins with the enlargement of embryo, with further it emerges from the seed coat (germinated) followed by the formation of the apical meristems to form the shoots and the roots.How to CiteUtami, E. S. W., Hariyanto, S. (2016). The Effect of Organic Nutrient and Growth Regulators on Seed Germination, Embryo and Shoots Development of Dendrobium antennatum Lindl. Orchid by In Vitro. Biosaintifika: Journal of Biology Biology Education, 8(2), 165-171.
DNA Barcoding: A Study of Guppy Fish (Poecilia reticulata) in East Java, Indonesia Sucipto Hariyanto; Hasan Adro’i; Mahrus Ali; Bambang Irawan
Biosaintifika: Journal of Biology & Biology Education Vol 11, No 2 (2019): August 2019
Publisher : Department of Biology, Faculty of Mathematics and Sciences, Semarang State University . Ro

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15294/biosaintifika.v11i2.20222

Abstract

Poecilia reticulata is a freshwater fish from the northeastern part of South America and spread widely to various countries in Asia and other continents. However, research about P. reticulate is limited even though it is a well-known fish species in Indonesia. The purpose of study was to identify the fish species of P. reticulata through DNA barcoding using the COI gene to determine the phylogenetic relationships among fish populations in East Java, Indonesia. In a present study, there were eight samples of P. reticulata from four different freshwater locations in East Java. Extraction, amplification, and sequencing of DNA samples were conducted to obtain the genetic data and construct a phylogenetic tree based on DNA sequences. The COI gene is the most popular markers to study genetic populations and phylogeography among the animal kingdom. Our phylogenetic reconstruction showed a clear that there were two groups of P. reticulata. The first group was obtain through species from East Java, Sukabumi, West Java (KU692776.1), Dominican Republic, Pandeglang, Banten and Myanmar. The second group was P. reticulata from southern Africa, Brazil, and Sukabumi, West Java (KU692775.1). The result of this study indicate that the guppy fish in East Java identic with P. reticulata from West Java (KU692776.1), which a widely used in classification based on evolutionary relationships. The findings of this study have important implication for the development of advance research about adaptation, phylogeny, and evolution of fish, especially of guppy fish.
Vegetation and Community Structure of Mangrove in Bama Resort Baluran National Park Situbondo East Java Sucipto Hariyanto; Akhmad Kharish Fahmi; Thin Soedarti; Emy Endah Suwarni
Biosaintifika: Journal of Biology & Biology Education Vol 11, No 1 (2019): April 2019
Publisher : Department of Biology, Faculty of Mathematics and Sciences, Semarang State University . Ro

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15294/biosaintifika.v11i1.19111

Abstract

Ecotourism development program at Bama beaches area require baseline data of mangrove structure at Bama Resort and in the past two decades has been lost about 35% area of mangrove forest in Indonesia and in the worldThe aims of this study was to find structure, composition, distribution and zonation patterns of mangroves at Bama Resort Baluran Nasional Park. Ten belt-transects were laid perpendicular to the shoreline, using standard methods. Vegetation structure was determined using data collected on plant species diversity, density, basal area, and the number of each species of mangroves. Shannon Wiener index to calculated diversity, evennes and Simpson to calculated dominance index. The results show there are 2 families and 6 mangrove species occurring in the study areas that is Rhizophoraceae (Rhizophora stylosa, Rhizophora mucronata, Rhizophora apiculata, Bruguiera gymnorrhiza, and Ceriops tagal) and Araceae (Nypa fruticans). The highest importance value was R. apiculata (229.90%) for trees, R. apiculata (148.69%) for the sapling, and R. apiculata (244.83%) for the seedling. The diversity (H) and dominance index (C) values were moderate (1.79) and 0.521. The most dominant species was R. apiculata (C=0.487). The mangrove zonation pattern from coastline to the mainland was R. stylosa, R. mucronata, and R. apiculata, in the outer zone, respectively (zone directly adjacent to the sea); B. gymnorrhiza and C. tagal in the middle zone; and N. fruticans in the zone that adjacent to the mainland. The present study will aid in the conduct and preservation planning of mangrove forest especially at Bama coast and generally in the coastal areas of Indonesia.
Remediation of Pb(II) and Cd(II) in Sea Water by Skeletonema costatum Thin Soedarti; Tini Surtiningsih; Sucipto Hariyanto; Eko P. Kuncoro
Sustinere: Journal of Environment and Sustainability Vol. 1 No. 2 (2017): pp. 63 - 143 (December 2017)
Publisher : Center for Science and Technology, IAIN Surakarta

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22515/sustinere.jes.v1i2.19

Abstract

The heavy metals that polluted sea water can end up polluting fish pond too. Hence, it is necessary to remove the heavy metals before sea water enters the fish pond. The aim of this study was to know the growth, remediation ability, and the highest of removal efficiency of marine diatom Skeletonema costatum in the lead (Pb(II)) and cadmium (Cd(II)) solution. This study used 3 x 4 factorial design, i.e. concentrations of the cell inoculation (5000 cells mL-1; 10000 cells mL-1; and 15000 cells mL-1) and concentrations of Pb(II) and Cd(II) (0; 0.5; 1; and 2 ppm), replicated five times. During five day exposure time, the cell density was observed daily using a microscope (400X), while filtrate of media was analyzed using AAS. The result showed that S. costatum could grow in Pb(II) and Cd(II) at 2 ppm, and could remediate Pb(II) and Cd(II) at 2 ppm. The highest removal efficiency of marine diatom S. costatum in Pb(II) solution was 80.5% (5000 cells mL-1 at 2 ppm on the first day), and in Cd(II) solution was 80% (15000 cells mL-1 at 0.5 ppm on the fifth day).
Keragaman Basidiomycota pada Permukiman Wonodadi Blitar, Indonesia Pratiwi, Intan Ayu; Nisrina, Jihan Syahla; Hariyanto, Sucipto; Herdiansyah, Mochammad Aqilah
Jurnal Ekologi, Masyarakat dan Sains Vol 6 No 1 (2025): Jan-Jun 2025
Publisher : ECOTAS

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.55448/m0b8d014

Abstract

Keragaman jamur liar yang tumbuh di sekitar permukiman penduduk jarang dilaporkan di Indonesia. Penelitian ini bertujuan untuk mengetahui jamur Basidiomycota yang ditemukan di area permukiman Desa Pikatan Kecamatan Wonodadi Kabupaten Blitar. Metode penelitian ini adalah deskriptif observasional, dilaksanakan bulan Januari-Maret 2024. Pengambilan sampel menggunakan teknik Purposive random sampling. Sampel yang ditemukan dicatat dan didokumentasi morfologinya untuk proses identifikasi meliputi warna dan bentuk jamur, permukaan tudung, bentuk tudung, tepi tudung, bilah, perlekatan bilah, tepi bilah, bentuk tangkai, letak tangkai, permukaan tangkai, cincin, dasar tangkai, ukuran tudung dan stipe, dan jenis penempelan substrat. Data yang didapat kemudian dicocokkan dengan buku identifikasi jamur untuk mengetahui genus jamur Basidiomycota. Hasil penelitian ini, ditemukan genus jamur Basidiomycota berjumlah 31 Genus yaitu, Agrocybe, Auricularia, Cantharellus Coprinellus, Coprinopsis, Coprinus, Cortinarius, Cyathus, Fayodia, Hemycena, Lactarius, Lentinus, Lepiota, Leucocoprinus, Lycoperdon, Marasmius, Micromphale, Mycena, Parasola, Perenniporia, Pluteus, Polyporus, Psathyrella, Pseudomerulius, Psilocybe, Schizophyllum, Tapinella, Tomentella, Trametes, Tricholoma, dan Xeromphalina.
Pengaruh Pemberian Mikoriza Glomus sp., Trichoderma harzianum dan Pupuk Hayati Terhadap Pertumbuhan dan Produksi Tanaman Jagung (Zea mays L.) Tiara Primayanti; Tini Surtiningsih; Thin Soedarti; Sucipto Hariyanto
Biotropic : The Journal of Tropical Biology Vol. 9 No. 1 (2025): Biotropic, Volume 9 Nomor 1, 2025
Publisher : Program Studi Biologi, Fakultas Sains dan Teknologi, Universitas Islam Negeri Sunan Ampel Surabaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29080/biotropic.v9i1.2267

Abstract

The aim of this study was to evaluate the impact of mycorrhizal applications of Glomus sp., Trichoderma harzianum species, and organic biofertilizers on the growth parameters and productivity of corn (Zea mays L.). This experiment was conducted in the period of May-July 2012 on agricultural land located in Kendal Village, Kendal District, Ngawi Regency. The applied methodology was a completely randomized design (CRD) with four treatment groups; (1) the control group, (2) the Glomus sp. mycorrhiza group as much as 30 g/plant, (3) the T. harzianum group as much as 30 ml/plant, (4) the biological fertilizer group as much as 5 ml/plant with each treatment repeated five times. Data related to plant growth and production were analyzed using the Analysis of Variance (ANOVA) test, with the Duncan test at a significance 5% to determine significant differences between treatments.. The results from the four treatments show that the application of Glomus sp., T. harzianum, and organic biofertilizers have a significant effect (α < 0.05) on the growth and yield of corn. T. harzianum treatment produced the highest plant height, which was 181 ± 8.9 cm, while the application of Glomus sp. mycorrhiza gave the best contribution to root length parameters with an average of 41.2 ± 5.3 cm. The application of biofertilizer also provides an optimum result for corn weight of 144 ± 28.9 g
DIVERSITY OF FRUIT FLIES (TEPHRITIDAE: BACTROCERA SPP.) IN CAMPUS C OF AIRLANGGA UNIVERSITY, SURABAYA, INDONESIA Eka Kartika Arum Puspita Sari; Moch. Affandi; Sucipto Hariyanto
Treubia Vol. 47 No. 2 (2020): Vol. 47, No. 2, December 2020
Publisher : BRIN Publishing (Penerbit BRIN)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14203/treubia.v47i2.3982

Abstract

This research aims to get information about the species of host plants and fruit flies, composition and structure of community, distribution pattern, and impact of environmental factors to fruit flies in Campus C, Airlangga University. Research was conducted from August to November 2019. A modification of Steiner trap with methyl eugenol 1.5 ml bait was installed in nine sites. Each Steiner trap was placed on a mango tree 1-2 meters above ground level. Trapped fruit fly specimens were collected after one week. Four replications were made, with intervals between two periods of installation. As many as 682 host plants of the fruit flies were found at the study site consisting of 25 species from 15 families. Results showed that 1121 individuals of Bactrocera fruit flies were found, consisting of 5 species, namely B. carambolae, B. dorsalis, B. minuscula, B. occipitalis, and B. musae. The most abundant species was B. carambolae (62.8%), followed by B. dorsalis (27.3%), B. minuscula (8.4%), B. occipitalis (1%), and the lowest was B. musae (0.5%). B. occipitalis has an even distribution pattern, while four other species have aggregated distribution patterns. The diversity index at nine locations ranged from 0.772 (low) to 1.151 (moderate). B. occipitalis has an even distribution pattern, while five other species have aggregated distribution patterns. The diversity index at nine locations ranged from 0.855 (low) to 1.328 (moderate). B. carambolae and B. dorsalis were the dominant species. The presence of fruit flies was influenced by environmental (humidity, temperature, sunlight intensity, wind) and host plant factors.
Substrate Preference and Population Structure of Lingulid Shell Species on the North Coast of East Java Rakmawati Rakmawati; Sucipto Hariyanto; Bambang Irawan; Fatmawati Patang; Supanut Pairohakul
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 31, No 2 (2026): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.31.2.209-218

Abstract

Lingulid shell (Brachiopoda: Lingulata) is a marine invertebrate that still exists. The mangrove profile on the north coast of East Java shows the potential to become a habitat for lingulid shell. Despite the significant potential, the lack of similar previous data on substrate profiles, population, and species distribution in East Java shows that the presence of lingulid shells has received less attention, suggesting the need for conservative efforts to conserve and sustainable uses of marine resource. Therefore, this study aimed to describe the habitat ecology of lingulid shell on the north coast of East Java based on regency or city, population structure, internal distribution pattern, and substrate profile, as well as identify species distribution. In addition, confirm the lingulid shell species by molecular identification based on cytochrome oxidase subunit I (COI) gene. Sampling was carried out using the purposive sampling method by digging the substrate in the plot area to a depth of 5-10 cm on the north coast of East Java to obtain lingulid frame substrate which was tested based on the fraction (size).  The results showed that lingulid shell could be found in Surabaya City as well as other regencies including Pasuruan, Probolinggo, Situbondo, Bangkalan, Pamekasan, and Sumenep. The discovery results identified the Lingula anatina species based on morphological and molecular characteristics. The population density of lingulid shell in East Java was found to be 52.6 individuals.m-2, while the internal distribution had no continuity. Furthermore, the presence and distribution of Lingula anatina had a preference for silt substrates.
Co-Authors Adro’i, Hasan Affandi, Moch Ahmad Ridlwan Jamil Akhmad Kharish Fahmi Bambang Irawan Dedy Prasetyo Dwi Kusuma Wahyuni Edy Setiti Wida Utami Eka Kartika Arum Eka Kartika Arum Puspita Sari Eko P. Kuncoro Emy Endah Suwarni Fahmi, Akhmad Kharish Fatmawati Patang Ganden Supriyanto Hasan Adro’i Hening Swastikaningrum Herdiansyah, Mochammad Aqilah Hery Purnobasuki Intan Ayu Pratiwi, Intan Ayu Jamil, Ahmad Ridlwan Kuncoro, Eko P. Maemonah, Maemonah Mahrus Ali Mahrus Ali Nisrina, Jihan Syahla Okik Hendriyanto Cahyonugroho Rakmawati, Rakmawati Supanut Pairohakul Suwarni, Emy Endah Thin Soedarti Tiara Primayanti Tini Surtiningsih Y. SRI WULAN MANUHARA