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HAYATI Journal of Biosciences

hayati
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Published by Institut Pertanian Bogor

ISSN : 19783019 EISSN : 20864094 DOI : -

Core Subject : Science, Agriculture,

Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences

HAYATI Journal of Biosciences (HAYATI J Biosci) publishes articles and short communication in tropical bioscience fields such as development, biotechnology, biodiversity and environmental issues. HAYATI J Biosci covers wide range of all life forms topics including virus, microbes, fungi, plants, animal and human. HAYATI J Biosci has been also indexed/registered in Crossref, DOAJ, CABI, EBSCO, Agricola and ProQuest.

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Articles 1,077 Documents

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Characterization of Endophytic Diazotroph Bacteria Isolated from Rice JOKO PRAYITNO; BARRY ROLFE
HAYATI Journal of Biosciences Vol. 17 No. 2 (2010): June 2010
Publisher : Bogor Agricultural University, Indonesia

Attempt to extend the biological nitrogen fixation to important crops such as rice has been conducted by isolating endophytic diazotrophs from rice rhizosphere and roots. In this study, three bacterial isolates of R2, R4, and E4 isolated from rice-legume rotation in the Nile Delta Egypt and four bacterial isolates of R38-O, R38-T, R53, and R58 isolated from wild rice in the Philippines were characterized using classical methods of bacterial identification and using biochemical test kits (API20E and API20NE). R2 and R4 isolates were identified as Rhizobium sp., E4 isolate was identified as Rhizobium leguminosarum bv. trifolii, and R38-T, R53, and R58 isolates were identified as Sphingomonas, Azospirillum, and Agrobacterium, respectively. Of all Rhizobium isolates, only E4 could form nodules on legumes other than their original host berseem clover (Trifolium alexandrum L.) as their original host.

Effect of Paracoccus sp. and their Genetically Modified on Skin Coloration of Red Sea Bream AGUS KURNIA; SHUICHI SATOH; SATOSHI HANZAWA
HAYATI Journal of Biosciences Vol. 17 No. 2 (2010): June 2010
Publisher : Bogor Agricultural University, Indonesia

Astaxanthin (Asx) content in the skin of red sea bream was observed in a feeding trial with two Asx sources: marine bacteria (Paracoccus sp.) and Asx concentrated marine bacteria modified genetically (GM marine bacteria). Four semi purified diets were prepared and contained two levels of marine bacteria (15 and 30 mg Asx/kg), 30 mg Asx/kg of GM marine bacteria and control diet without additional Asx. The diets were fed to fourteen fish of red sea bream (initial weight 128.5 g) which were randomly distributed in each 60-l glass tank. Asx content in the skin of fish fed on non-GM marine bacteria diets were higher than that of fish fed on GM marine bacteria. Additionally, Asx accumulation in the skin of fish fed on diet of non-GM marine bacteria containing 15 mg Asx/kg diet was higher than those fish fed on diet supplemented with 30 mg Asx/kg of GM marine bacteria. The results showed that by adding the supplement of Asx derived from marine bacteria (Paracoccus sp.) to the red sea bream diets might enhance the skin coloration of red sea bream and the other carotenoids contained in marine bacteria might also enhance the coloration.

Phytochemical Assay and Antiplatelet Activity of Fractions of Velvet Bean Seeds (Mucuna pruriens L.) WAHYU WIDOWATI; HANA RATNAWATI; UDJU DJUNAEDI RUSDI; WAHYU WINARNO; VICTOR IMMANUEL
HAYATI Journal of Biosciences Vol. 17 No. 2 (2010): June 2010
Publisher : Bogor Agricultural University, Indonesia

Platelet aggregation is an important factor contributing to the formation of thrombus due to an uncontrolled blood clotting. An antiplatelet agent is a compound which decreases platelet aggregation and inhibits thrombus formation. The objectives of this study were to determine the class of compound employing phytochemical assay and to determine the in vitro antiplatelet activity of four fraction, namely hexane, ethyl acetate, butanol, and water fractions of velvet bean seeds (Mucuna pruriens L.) using epinephrine (EPN) as agonist of platelet aggregation. The antiplatelet activities were tested in human platelet rich plasma with hyperaggregation. To determine the activities, EPN was arranged at 4 level of concentrations (300, 150, 75, and 30 μM), and antiplatelet agents were at 500 µg/ml. The results indicated that ethyl acetate, butanol and water fraction contained high flavonoids and moderate phenols. The water, butanol and ethyl acetate fractions of velvet bean seeds exhibited potential inhibition of EPN-induced platelet aggregation at all concentrations. The strongest antiplatelet agent was water fraction and had the same antiplatelet activity as aspirin at level 150, 75, and 30 μM of EPN. Butanol fraction had the same antiplatelet activity as aspirin at the lowest EPN (30 μM).

Developing of Tris Soy Milk Diluent for Frisian Holstein Bull Frozen Semen RADEN IIS ARIFIANTINI; TUTY LASWARDI YUSUF
HAYATI Journal of Biosciences Vol. 17 No. 2 (2010): June 2010
Publisher : Bogor Agricultural University, Indonesia

Commercial artificial insemination (AI) companies in the beginning of year 2000, introduced new generation of cryoprotectans with lecithin based diluents such as Biociphos (IMV, L’Aigle, France) and Andromed® (Minitub, Germany). Since the commercial diluents were imported, they were often not readily available. This research aimed to develop Tris-soy modified diluent, and investigated its effects on the quality and fertility of Frisian Holstein (FH) bulls frozen semen. This research consists of two experiments. At first, we compared the FH Bull frozen semen quality in modified tris soy milk (TSM), Andromed® and Tris-eggyolk (TEY) diluents, the second was the fertility trials of the frozen semen. Results of the experiment demostrated that post thawed sperm motility in the semen preserved with TEY (49.10%) or Andromed® (50.21%) was significantly higher (P = 0.037) than that preserved with TSM (41.53%). In contrast, the conception rates in cows inseminated with semen preserved with TSM, TEY, and Andromed® were 53.84% (7/13), 38.88% (5/13), and 38.46% (7/19), respectively. We are optimistic that TSM diluents will have similar qualities as TEY and Andromed® on preserving frozen semen by doing future intensive studies.

Compost Extracts of Vegetable Wastes as Biopesticide to Control Cucumber Mosaic Virus WIWIEK SRI WAHYUNI; ARIE MUDJIHARJATI; NIKEN SULISTYANINGSIH
HAYATI Journal of Biosciences Vol. 17 No. 2 (2010): June 2010
Publisher : Bogor Agricultural University, Indonesia

In semiaerobic conditions, different composting processes of vegetable wastes have different characteristics. When compost extracts amended with the effective microorganism-4 (EM4, +E) and Pseudomonas aeruginosa Ch1 (+B) stored for 40 days, the bacteria population and P-content increased. Tobacco plants treated with compost extracts amended with +E+B and [+E+B] directly to organic materials and inoculated with Cucumber mosaic virus (CMV) both sprayed or watered applications reduced the disease severity. This is due to the higher bacteria population in the root and rhizosphere, particularly the activities of P. aeruginosa Ch1 as plant growth promoting rhizobacteria (PGPR) rather than the activities of bacteria from EM4. The role of P. aeruginosa Ch1 to induce resistance of the plants to CMV was suggested by producing siderophores under the limited Fe conditions,17-20 ppm.

Identification and Molecular Characterization of Odontoglosum Ringspot Virus (ORSV) from Bogor, Indonesia IRWAN LAKANI; GEDE SUASTIKA; NURHAJATI MATTJIK; TRI ASMIRA DAMAYANTI
HAYATI Journal of Biosciences Vol. 17 No. 2 (2010): June 2010
Publisher : Bogor Agricultural University, Indonesia

Recently, field surveys were conducted in several orchid nurseries in Bogor (West Java), Magelang (Central Java) and Malang (East Java). We found that most of the commercially orchids sampled from Bogor was infected by virus-like disease. The symptoms depend on the orchid species. Thus, the symptoms varied such as mottle, mosaic and necrotic flecks either on the leaves or on the flowers. Similiar symptoms were not found in samples obtained from Central Java and East Java. A Tobamo-like virus was inferred to be possible cause of the viral disease-like symptoms. Serological test of the samples by ELISA showed positive against Odontoglosum Ringspot Virus (ORSV) antibody and was negative against Cymbidium Mosaic Virus (CyMV) antibody. Total RNA was extracted from symptomatic plants and RT-PCR was carried out by using a pair of coat protein (CP) gene primer of ORSV. It was successfully amplified a 500 bp of DNA fragment and it was directly sequenced. The nucleotide sequence of CP gene had confirmed the identity of ORSV. Phylogenetic analysis based on the CP nucleotide sequences were grouped into only one major cluster. The ORSV isolate from Bogor (Sd 21) and the other isolates were clustered in the same group and had highest nucleotide homology (99%). These results provide first evidence of ORSV infecting orchids in Bogor, Indonesia.

The Effect of Ascorbic Acid Treatment on Viability and Vigor Maize (Zea mays L.) Seedling under Drought Stress HAMIDAH HAMAMA; ENDANG MURNIATI
HAYATI Journal of Biosciences Vol. 17 No. 3 (2010): September 2010
Publisher : Bogor Agricultural University, Indonesia

This study was conducted in the laboratory and the field to examine the effects of ascorbic acid treatment on germination and seedling growth under drought stress. The laboratory works consisted of two experiments and were designed to determine the critical osmotic potential of maize and to determine the optimum ascorbic acid concentration. The field study was designed to examine the effects of soaking seed in ascorbic acid on seedling growth under drought stress. Drought condition was simulated by PEG-6000 and regulation of water treatment. During the first experiment, interactions of both osmotic potential and varieties were significant at all variables. Germination percentage and speed of germination were significantly decreased by increasing of osmotic potential. The second experiment showed that interactions of both factors were significant at all variables except vigor index, the length of shoot, primary, and seminal root. The results showed that the ascorbic acid treatment improved the germination percentage, the speed of germination and the vigor index compared with the control, besides the increase in length of shoot, primary and seminal root and number of seminal root. However, the best result was showed by 55 mM ascorbic acid. The result of field experiment showed that interactions were not always significant and 55 mM ascorbic acid treatment increased the seedling height, the number of leaves and leaf area but it had no effect on the water deficit and the root length.

Nursery Culture Performance of Litopenaeus vannamei with Probiotics Addition and Different C/N Ratio Under Laboratory Condition . WIDANARNI; DEBY YUNIASARI; . SUKENDA; JULIE EKASARI
HAYATI Journal of Biosciences Vol. 17 No. 3 (2010): September 2010
Publisher : Bogor Agricultural University, Indonesia

Application of bioflocs technology and probiotics has improved water quality and production of Pacific white shrimp (Litopenaeus vannamei) culture. This experiment was to verify the effect of probiotic bacteria addition and different carbon:nitrogen (C:N) ratio on water quality and performance of Pacific white shrimp nursery culture. Nursery culture was carried out for 25 days in an aquarium under laboratory condition with stock density of one Post-Larvae (PL) (poslarval) per liter (24 PL/aquarium) of PL16 shrimp. Different C:N ratio resulted a significant difference on shrimp production performance. Treatment of 10 C:N ratio demonstrated the best shrimp growth (20.37 + 0.48% per day in weight and 6.05 + 0.41% per day in length), harvesting yield (1180 + 62 g/m3) and feed efficiency (121 + 6%). There was however no significant difference observed between treatments in water quality.

Soy Germed Protein Plus Zn as an Inducer Insulin Secretion on Type-2 Diabetes Mellitus HERY WINARSI; AGUS PURWANTO
HAYATI Journal of Biosciences Vol. 17 No. 3 (2010): September 2010
Publisher : Bogor Agricultural University, Indonesia

Hyperglicemic induces pancreatic cells to produce inadequate insulin. However, previous studies revealed that soy protein induce pancreatic cells to secrete insulin. Hence, this study was aimed to investigate effect of soy germed protein on the insulin and blood glucose level of type-2 diabetes mellitus with Zn enrichment. The research involved twenty four women that characterized with having more blood glucose level than normal, body mass index more than twenty three kg/m2, and age more than fourty years old. They were divided into three groups randomly, eight woman for each group. The first, second and third group were treated respectively with milk containing soy germed protein plus Zn, this product without Zn, and placebo, all for two months. Blood samples were taken at baseline, one and two months after observation. Results showed that two months after observation the insulin level increased from 194.79 to 519.82 pmol/ml (P = 0.033) in group consuming milk containing soy germed protein with or without Zn, supported by significantly reduced blood glucose level. This result might be correlated with the potency of isoflavones in soy germ protein to protect pancreatic beta cellsmembrane from free radicals attack. Therefore, this maintain the cells integrity and to secrete optimal insulin.

Primary Nutritional Content of Bio-Flocs Cultured with Different Organic Carbon Sources and Salinity JULIE EKASARI; ROSELIEN CRAB; WILLY VERSTRAETE
HAYATI Journal of Biosciences Vol. 17 No. 3 (2010): September 2010
Publisher : Bogor Agricultural University, Indonesia

Application of bio-flocs technology (BFT) in aquaculture offers a solution to avoid environmental impact of high nutrient discharges and to reduce the use of artificial feed. In BFT, excess of nutrients in aquaculture systems are converted into microbial biomass, which can be consumed by the cultured animals as a food source. In this experiment, upconcentrated pond water obtained from the drum filter of a freshwater tilapia farm was used for bio-flocs reactors. Two carbon sources, sugar and glycerol, were used as the first variable, and two different levels of salinity, 0 and 30 ppt, were used as the second variable. Bio-flocs with glycerol as a carbon source had higher total n-6 PUFAs (19.1 + 2.1 and 22.3 + 8.6 mg/g DW at 0 and 30 ppt, respectively) than that of glucose (4.0 + 0.1 and 12.6 + 2.5 mg/g DW at 0 and 30 ppt). However, there was no effect of carbon source or salinity on crude protein, lipid, and total n-3 PUFAs contents of the bio-flocs.

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