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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
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Short communication: A new record of Etlingera megalocheilos (Griff.) A.D. Poulsen (Zingiberaceae) in Sulawesi, Indonesia TRIMANTO TRIMANTO; LIA HAPSARI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190407

Abstract

Trimanto, Hapsari L. 2018. Short communication: A new record of Etlingera megalocheilos (Griff.) A.D. Poulsen (Zingiberaceae) in Sulawesi, Indonesia. Biodiversitas 19: 1227-1235. A through morphological examination has been conducted to a living specimen of Zingiberaceae collection of Purwodadi Botanic Garden, East Java which was collected from Pangi Binangga Nature Reserve, Central Sulawesi. The result showed that the characters of the species match very well with the description of Etlingera megalocheilos. The distribution of E. megalocheilos was previously reported to occur only in Sundaland includes Peninsular Malaysia, Singapore, Sumatra, Java, and Borneo. Thus, E. megalocheilos is a newly recorded species in Sulawesi; and confirmed that its distribution record now has expanded to Wallacea. The key morphological characters of E. megalocheilos are labellum hourglass-shaped, dull red or red to orange-red with the yellow margin, the anther is not covered by the corolla lobe, and have slightly angled filament. Detailed descriptions, photographs, and notes of the species are presented in this paper. Due to its high potential medicinal properties, further bioprospecting studies are necessary to conduct.
Social capital of the community in the management of Danau Sentarum National Park, West Kalimantan, Indonesia EMI ROSLINDA
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190410

Abstract

Roslinda E. 2018. Social capital of the community in the management of Danau Sentarum National Park, West Kalimantan, Indonesia. Biodiversitas 19: 1249-1257. Many studies on the management of National Park have been conducted in various countries. This research highlights the management of Danau Sentarum National Park which is administratively located in West Kalimantan Province precisely in Kapuas Hulu District, from the view of social capital. The research method was surveyed using a quantitative approach. Social capital of the community in the area of Danau Sentarum National Park is still high/strong. Based on this fact, the management of the National Park that has been conducted by the government alone can collaborate with the management by community and collaborative management that pays a good attention to the minimum resistance and maximum synergy.
Antimicrobial activity of polyisoprenoids of sixteen mangrove species from North Sumatra, Indonesia SUMARDI SUMARDI; MOHAMMAD BASYUNI; RIDHA WATI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190409

Abstract

Sumardi, Basyuni M, Wati R. 2018. Antimicrobial activity of polyisoprenoids of sixteen mangrove species from North Sumatra, Indonesia. Biodiversitas 19: 1243-1248. Mangroves including those that are distributed in the coast of North Sumatra contain polyisoprenoid with varying levels of polyprenol and dolichol constituents. Differences in polyisoprenoid levels were closely related to the salinity of sea but the information about their biological activities is scarce. The present study aimed to describe the biological activities, antimicrobial, antioxidant, and antifungal effects of polyisoprenoid extracts from sixteen mangrove species of North Sumatra, Indonesia. Polyisoprenoids were isolated from mangrove leaves and tested for their antimicrobial activity against Escherichia coli, Staphylococcus aureus, and Candida albicans. Meanwhile, their antioxidant activity was represented by their capacity in scavenging DPPH (2,2-diphenyl-1-picrylhydrazyl) free-radical agents. The most predominant polyisoprenoids found in sixteen mangrove leaf extracts was dolichols (75%). Polyprenols-dominant species, Acacia auriculiformis, Hibiscus tiliaceus, Pongamia pinnata, and Ricinus communis, and dolichols-dominant species, Avicennia lanata, Av. marina, Av. officinalis, Barringtonia asiatica, Bruguiera gymnorrhiza, Calophyllum inophyllum, Nypa fruticans, and Pandanus odoratissimus, inhibited the growth of E. coli and S. aureus. However, the antioxidant activity of those sixteen mangrove species was of a weak category. Surprisingly, all other mangroves polyisoprenoid extracts did not inhibit C. albicans growth. This study suggested that polyisoprenoids in mangroves have potential antibacterial properties to be developed further.
Bacterial symbionts of acroporid corals: Antipathogenic potency against Black Band Disease DIAH PERMATA WIJAYANTI; AGUS SABDONO; PRASTYO ABI WIDYANANTO; DIO DIRGANTARA; MICHIO HIDAKA
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190408

Abstract

Wijayanti DP, Sabdono A, Widyananto PA, Dirgantara D, Hidaka M. 2018. Bacterial symbionts of acroporid corals: Antipathogenic potency against Black Band Disease. Biodiversitas 19: 1236-1242. Black Band Disease (BBD), an infectious coral disease which can cause a rapid decline of coral reefs, has appeared as a serious threat -to many reefs around the world including Karimunjawa National Park, Java Sea. Although it had been studied for more than 30 years, control of disease remains obscure. In the present research coral symbiont bacteria having antipathogenic activity against Black Band bacterial associate were screened and characterized. Fourteen out of 87 bacteria isolates derived from healthy corals showed antagonism against the Black Band bacterial strains. The isolates were then re-examined using disc-diffusion method to confirm the initial observation. The CI6 showed the strongest ability to inhibit BAFBB5, a bacterial strain associated with the BBD. Following the partial sequencings of 16S rDNA, the results indicated that the CI6 isolate was closely related to Virgibacillus salarius strain SA-Vb1, while the BBD associate isolate has strong relation with Virgibacillus marismortui. The results have shown that bacterial strains derived from healthy acroporid corals have potential to be used as a biocontrol agent against BBD.
Habitat of Nepenthes spp. in the area of Sampit Botanic Gardens, Central Kalimantan, Indonesia SYAMSUL HIDAYAT; HENDRA HELMANTO; DODO DODO; DANANG WAHYU PURNOMO; IKAR SUPRIYATNA
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190411

Abstract

Hidayat S, Dodo, Purnomo DW, Helmanto H, Supriyatna I. 2018. Habitat of Nepenthes spp. in the area of Sampit Botanic Gardens, Central Kalimantan, Indonesia. Biodiversitas 19: 1258-1265. Nepenthes spp are protected plant and most of them are at least concern criteria. The research purpose is to explore the habitat information that supports the existence of Nepenthes in the area around Sampit Botanic Gardens, Central Kalimantan. Three different sites have been selected in this research. In each sites, seven sampling plots have been made by purposively sampling, each plot measuring 5x5 m2. In the Gelam Forest (Melaleuca quinquenervia), two Nepenthes species have been found, namely Nepenthes gracilis and Nepenthes mirabilis. In two other sites, in Peat Swamp Forest and Alang-alang Forest (Imperata cylindrica), dominated by N. mirabilis. Combretocarpus rotundatus is a tree in the Peat Swamp Forest that is mostly climbed by Nepenthes. Scleria sumatrensis and Stenochlaena palustris are two species of plants that are always found in the three research sites, but the dominant family is Melastomataceae primarily represented by Melastoma malabathricum. Nepenthes mirabilis can be found in the three research sites with an equal number, but N. gracilis was only abundant in the Gelam forest. By using imageJ software, obtained canopy cover in Gelam forest only 10%. Meanwhile, based on laboratory test, the soil in the Gelam forest is dominated by the dust fraction and is relatively more fertile than the Alang forest. In this case, Nepenthes favored open canopy, but was quite watery and relatively fertile.
Isolation, identification and diversity of oleaginous yeasts from Kuching, Sarawak, Malaysia MICKY VINCENT; HUANG CHAI HUNG; PATRICIA ROWENA MARK BARAN; AFIZUL SAFWAN AZAHARI; DAYANG SALWANI AWANG ADENI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190412

Abstract

Vincent M, Hung MC, Baran PRM, Azahari AS, Adeni DSA. 2018. Isolation, identification and diversity of oleaginous yeasts from Kuching, Sarawak, Malaysia. Biodiversitas 19: 1266-1272. The present study was performed to isolate, identify and determine the diversity of oleaginous yeasts from various sources in Kuching, Sarawak (Malaysia). Microscopic observations via light and scanning electron microscope (SEM) indicated that the yeast isolates were in sizes ranging from 2-3 µm in width and 4-8 µm in length, typical of most unicellular ascomycotic fungi. Polymerase Chain Reaction (PCR) and molecular identification performed on the yeast isolates, targeting the D1/D2 region of the 26S rDNA, identified 6 yeast species from the 21 isolates, namely Pichia manshurica (5/21), Candida krusei (8/21), Candida parapsilosis (1/21), Pichia guilliermondii (2/21), Clavispora lusitaniae (1/21) and Kluyveromyces marxianus (4/21). All 21 yeast isolates accumulated intracellular lipids when grown in nitrogen-limited medium, as tested via Sudan IV staining. The present study is the first to document the production of lipids bodies in C. krusei, C. parapsilosis, and C. lusitaniae. Further investigations to assess the growth kinetics, lipid production efficiencies and lipids profiles of these oleaginous yeasts may provide insights into the possible utilization of these isolates for a variety of scientific, technical and industrial applications.
RAPD based molecular analysis genetic diversity of Ornithoptera croesus found in Bacan Island, Indonesia ABDU MAS'UD; A.D COREBIMA; MOHAMMAD AMIN; FATCHUR ROHMAN
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190413

Abstract

Mas'ud A, Corebima AD, Amin M, Rohman F. 2018. RAPD based molecular analysis genetic diversity of Ornithoptera croesus found in Bacan Island, Indonesia. Biodiversitas 19: 1273-1279. The endemic butterfly commonly known as birdwing butterfly found in Bacan island (Ornithoptera croesus) was first discovered by Wallace in 1859. The O. croesus hotspot is a nature preserve located at various altitudes around Sibela mountain. The O. croesus belongs to macrolepidoptera which is famous for their variety of body colors and typical morphology identified in female and male found at various altitude places. This study aimed to examine the genetic diversity of O. croesus at some different altitude spots in Sibela mountain using PCR-RAPD molecular analysis. The result of the DNA amplification showed high polymorphism in O. croesus (84,81). The clustering pattern indicated that O. croesus ? 400 meters above sea level (m asl.) and O. croesus ? 400 m asl. had the highest level of genetic similarity, while the lowest level of genetic similarity was observed in O. croesus ? 800 m asl. and O. croesus ? 20 m asl. On the basis of these findings, clustering pattern showed that the highest level similarity could also be found in species that live in the same altitude.
Short Communication: The diversity of intestinal parasitic helminths in children of Silvercity, Linden, Guyana JOENITTA ARTHUR -MCKENZIE,; ABDULLAH ADIL ANSARI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190415

Abstract

Arthur-McKenzie J, Ansari AA. 2018. Short Communication: The diversity of intestinal parasitic helminths in children of Silvercity, Linden, Guyana. Biodiversitas 19: 1289-1293. This study was conducted in the Silvercity area, Linden, Guyana and endeavored to determine the prevalence of intestinal parasitic helminths in children aged 5-15 and the level of awareness of these parasitic infections among community members. Questionnaires were distributed to 30 households and 26 children which accounts for 40% of the population aged 5-15 using a simple random sampling method and tested during the months of February-April 2017. The fecal samples were collected from 26 children selected randomly and were analyzed using wet mount and formalin-ether sedimentation method. The highest age was 15 and the lowest 5, the mean age was 8. The results showed that there was a 57.6% (15/26) prevalence of intestinal parasitic helminths among children aged 5-15 within the Silvercity area. Among the parasites found, Ascaris lumbricoides was the most prevalent (38%; 10/26) followed by Enterobius vermicularis (19%; 5/26), Trichuris trichiura (15%; 4/26) and hookworm (3.8%; 1/26). Study also found that the level of awareness of transmission among community members was 40%.
The mangrove flora and their physical habitat characteristics in Bunaken National Park, North Sulawesi, Indonesia RIGNOLDA DJAMALUDDIN
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190417

Abstract

Djamaluddin R. 2018. The mangrove flora and their physical habitat characteristics in Bunaken National Park, North Sulawesi, Indonesia. Biodiversitas 19: 1303-1312. The mangrove forests of Bunaken National Park are among the most distinctive and unusual in Southeast Asia because of the species that the forests contain. This study investigated the identity and diversity of mangrove plants as well as physiographic factors and major physical processes of every type of sub-habitats. Seven surveys were conducted to collect and identify mangrove species of the park. Sub-habitats where specimen was found, aspects related to tidal inundation, nature of soil, freshwater influence and topography were observed as well as major physical processes influencing the condition of each sub-habitat. The results suggested that the park was floristically rich with at least 27 plant species and they were distributed over ten recognized sub-habitat types in different composition and diversity. Ceriops zippeliana Blume, Lumnitzera racemosa Willd, Lumnitzera littorea (Jack) Voigt., Sonneratia ovata Backer, and Camptostemon philippinense (Vidal) Becc. were found in Bunaken National Park and their presence confirmed the broader distribution limit of these species within Indo-Malesia region. A special notice was for C. philippinense as the distribution limit of this is rarely reported.
Short Communication: Morphological characterizations of Aphis passeriniana (Del Guercio) (Hemiptera: Aphididae) living on common sage in Turkey AGUSTİN ZARKANİ; FERİT TURANLI
Biodiversitas Journal of Biological Diversity Vol. 19 No. 4 (2018)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d190419

Abstract

Zarkani A, Turanl? F. 2018. Short Communication: Morphological characterizations of Aphis passeriniana (Del Guercio) (Hemiptera: Aphididae) living on common sage in Turkey. Biodiversitas 19: 1319-1325. Aphis passeriniana (Del Guercio) (Hemiptera: Aphididae) living on sage plant in Turkey is already recorded, but some morphological characterizations are still needed to extend. Here, morphometrics data of A. passeriniana is described from apterous viviparous females (fundatrigeniae and fundatrices) attacking Salvia officinalis Linnaeus (Lamiaceae) in Turkey. Seventy specimens were collected in Izmir province between January 2015 and December 2017. The study revealed that apterous viviparous females of A. passeriniana turkish species have body lenght of 0.715-1.407 mm, rostal segment IV+V of 1.80-2.49 × hind tibia II, antennae processus terminalis/base of 1.4-1.8, siphunculus of 0.56-1.56 × cauda length and cauda of 3-6 setae. Biometric data of alate viviparous and intermediate individual between apterous and oviparous, and also a revision of identification key for the species within aphid species in Salvia are consisted.

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