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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,315 Documents
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Folk classification and traditional uses of Cyperus esculentus, a neglected and underutilized species in Benin Vidédji Naéssé ADJAHOSSOU; Dossou Seblodo Judes Charlemagne GBEMAVO; SAMUEL ABIDJA; Judicaël LALY; Ahodpnissou Anicet GBAGUIDI; Alexandre DANSI ANAGONOU
Biodiversitas Journal of Biological Diversity Vol. 22 No. 7 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220750

Abstract

Abstract. Adjahossou VN, Gbemavo DSJC, Abidja S, Laly J, Gbaguidi AA, Anagonou AD. 2021. Folk classification and traditional uses of Cyperus esculentus, a neglected and underutilized species in Benin. Biodiversitas 22: 2972-2979. The sweet pea or tigernut (Cyperus esculentus L.) has very high potential to be developed but is considered a neglected and underutilized plant in Benin. The current study aims to investigate the indigenous knowledge related to local diversity, production and uses of various landrace types of tigernut grown in its production areas in Benin. Using Participatory Research Appraisal (PRA) method, we surveyed 113 tigernut farmers in different regions of production in Atacora Department, Benin. Univariate statistics were performed to describe and compare tigernut farmers' responses on botanical and agronomic criteria. We found that the tigernut farmers in the studied area distinguished three landraces of C. esculentus. Two landrace types produced yellow-skinned tubers and the other produced black-skinned tubers. Economic value, agro-morphological traits and organoleptic quality were the criteria considered by the farmers when choosing the type of landrace to cultivate. According to the farmers, the attacks of the tubers by earthworms and termites constituted the main constraints of the production of tigernut. Local people used the species mainly for food, while small proportion was for medicine (e.g., for aphrodisiac) and soil fertilization purposes. This study implies that C. esculentus in Benin deserves better attention to be conserved and developed.
Ecosystem services research trends in Indonesia: a bibliometric analysis Najmi Firdaus; SUPRIATNA SUPRIATNA; Jatna Supriatna
Biodiversitas Journal of Biological Diversity Vol. 23 No. 2 (2022)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d230255

Abstract

Abstract. Firdaus N, Supriatna, Supriatna J. 2022. Ecosystem services research trends in Indonesia: a bibliometric analysis. Biodiversitas 23: 1105-1117. Among the world's mega-biodiversity countries in the tropics, Indonesia has experienced the most severe deforestation in recent decades. It is alarming that the rate is potentially disrupting the future provision of ecosystem services. On the other hand, there is a paucity of research on ecosystem services in Indonesia, and its current state is unknown. This study provided an overview of ecosystem services research trends in Indonesia from 1998 to 2020 using bibliometric and science mapping analysis of 298 published works from the Scopus database. Since 2013, publications on the topic have increased and grown exponentially, with environmental science dominating the subjects, followed by agriculture and biology, and the social sciences. Biodiversitas and Ecosystem Services are the most prolific journals for publishing results, while Science and Ecological Economics have the most citations. Being the most productive in publications, Indonesia and the United States are also engaged the most in research collaborations. Ecosystem services research in Indonesia is closely linked to biodiversity, deforestation, and oil palm. Furthermore, oil palm, sustainability, and land-use change are promising topics to address in the coming years. This study suggests that the dynamics of ecosystem services research in Indonesia call for further developments in improving the quality of impactful research through interdisciplinary approaches, international collaboration, and the engagement of diverse stakeholders and policy-makers related to the field, to increase the benefits of sustainable ecosystem services in the future.
Vegetation diversity and its interspecies association with merbau (Intsia bijuga) at three habitats of tropical rain forest in West Papua, Indonesia Susanti Tasik; SITI MUSLIMAH WIDYASTUTI; MUSYAFA MUSYAFA; PRIYONO SURYANTO
Biodiversitas Journal of Biological Diversity Vol. 22 No. 8 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220835

Abstract

Abstract. Tasik S, Widyastuti SM, Musyafa, Suryanto P. 2021. Vegetation diversity and its interspecies association with merbau (Intsia bijuga) at three habitats of tropical rain forest in West Papua, Indonesia. Biodiversitas 22: 3383-3391. The stability of vegetation community indicated by species diversity, structure and composition affects the relationship between species. The understanding of interspecies association in their natural habitat is important especially for management and conservation strategies of species with particular interest, including merbau (Intsia bijuga O. Colebr Kuntze), a timber tree species with high commercial value. This study aims to investigate the diversity and composition of vegetation coexisting with merbau, and to see whether there is pattern of interspecies association with merbau. Vegetation analyses of species richness, diversity index, evenness index and interspecies relationship were conducted at three research locations in West Papua, Indonesia, namely Mount Meja Natural Tourism Park (Hutan Taman Wisata Alam Gunung Meja/HTWAGM), Bembab Beach Forest of South Manokwari (Hutan Bembab Pantai Manokwari Selatan/HBPMS) and Bembab Mountain Forest of South Manokwari (Hutan Bembab Gunung Manokwari Selatan/HBGMS). The results showed that the species Caryota rumphiana, Licuala sp 1, Calophyllum inophyllum, Garcinia pichoriza, Pometia coreacea and Pometia pinnata always grew side by side with Intsia bijuga in three locations. Furthermore, the association analysis indicated a positive and strong relationship between Intsia bijuga and Pometia coreacea, Licuala sp1, Licuala sp 2, Caryota rumphiana at all three research sites. In addition, Pometia coracea had the highest Chi-square value (X2 = 20.00) with the value of the three association indexes reached maximum value. We also found that the vegetation communities in the habitat of merbau had varying vegetation structure and composition as well as biodiversity indicators, yet they were all at stable state. The finding on vegetation analyses was confirmed with the result of soil analyses in which the physical and chemical properties had optimal conditions for vegetation to grow, including for merbau.
Prevalence of Argulus indicus, histopathology and hematological properties of infected wild fish in Lake Towuti, Indonesia Amriana Amriana; Kesuma D. Sari; Sriwulan Sriwulan; Hilal Anshary
Biodiversitas Journal of Biological Diversity Vol. 22 No. 8 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220859

Abstract

Abstract. Amriana, Sari DK, Sriwulan, Anshary H. 2021. Prevalence of Argulus indicus, histopathology and hematological properties of infected wild fish in Lake Towuti, Indonesia. Biodiversitas 22: 3578-3584. Parasites are disease agents that can threaten the health and survival of wild fish as individuals and at a population level. This study aimed to improve knowledge on the prevalence of Argulus indicus, infestation rates and the pathological effects of parasite infestation on hosts as well as hematological properties of infected fish. This study can inform future studies on the prevention and control of the cases of Argulus indicus infestation. Fish from Lake Towuti (20 45? 0? S, 1210 30? 0? E) were caught from February to May 2019 using traps and gill nets. The total of 373 specimens obtained comprised 102 climbing perch (Anabas testudineus), 74 three-spot cichlids (Cichlasoma trimaculatum), 84 Nile tilapia (Oreochromis niloticus), and 113 striped snakeheads (Channa striata). The prevalence, mean intensity and abundance of A. indicus were highest in C. striata with a prevalence of 81%, mean intensity of 5.17 parasites/fish and abundance of 4.06 parasites/fish. The lowest parasite infection level was seen in C. trimaculatum with a prevalence of 4.1%, mean intensity 1.66 and mean abundance of 0.06. Histological analysis showed inflammatory responses in the skin of snakeheads (hemorrhage, increased spread of melanomacrophage and leukocyte cells), melanomacrophage and the spread of leukocyte cells were observed in climbing perch. In contrast, melanomacrophage was often observed in tilapia and trimac cichlid. Blood imaging analysis showed significant differences (P <0.05) in the number of leukocytes and percentage of monocyte cells between uninfested fish and those infested with A. indicus.
Drought-adapted maize line based on morphophysiological selection index RUSNADI PADJUNG; MUH FARID; Yunus Musa; MUHAMMAD FUAD ANSHORI; AMIN NUR; ANDI MASNENONG
Biodiversitas Journal of Biological Diversity Vol. 22 No. 9 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220951

Abstract

Abstract. Padjung R, Farid M, Musa Y, Anshori MF, Nur A, Masnenong A. 2021. Drought-adapted maize line based on morphophysiological selection index. Biodiversitas 22: 4028-4035. Synthetic line formation is an effort to increase maize productivity in drought-stressed areas. This process requires systematic selection in determining adaptability levels involving important secondary characters formulated in the selection index. Furthermore, the principal component index had been widely reported, both in normal and stressed conditions. The selection index development on morpho-physiological characters based on multivariate analysis was expected to increase drought stress tolerance and maize lines selection precision. Therefore, the purpose of this research was to form a selection index based on morpho-physiological characters and selecting synthetic lines adaptive under drought stress. This research was designed using a split-plot with 3 replications,  where the main plot consisted of normal and stressed irrigation, while the subplot was genotype consisting of 6 lines and 3 check varieties namely Bisma, Lamuru, and Sukamarga. Observations were performed on 18 morphological and 4 physiological characters, and the results showed that the selection index was formed based on multivariate analysis from 9 characters. Through index selection, Syn_2-2 (0.79), Syn_2-15 (0.85) and Syn_2-16 (0.97) were considered as drought stress adaptive lines. Therefore, the 3 lines can be recommended in the synthetic variety release process.
Structure and tree species composition of forest fringe of a forest fragment in an oil palm plantation at Suai, Sarawak, Malaysian Borneo Claudia Lennya Jana; ISMAIL JUSOH
Biodiversitas Journal of Biological Diversity Vol. 22 No. 7 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220755

Abstract

Abstract. Jana CL, Jusoh I. 2021. Structure and Tree Species Composition of Forest Fringe of A Forest Fragment in an Oil Palm Plantation at Suai, Sarawak, Malaysian Borne. Biodiversitas 22: 3013-3019. Forest fragments in oil palm plantations are remnants of the original forest tract with various sizes and shapes after clearing forested lands for crops and roads. Fragmented forests usually created forest fringe or edge habitats that differ in light intensity, temperature, humidity, heavy rainfall, and strong winds from its core. The study was aimed to determine the structure and tree species composition of the forest fringe of a fragmented forest in an oil palm plantation Suai, Sarawak. This study established a total of 24 sampling plots within the forest fringe. Tree enumeration and species identification were conducted in all sampling plots to all trees with a diameter at breast height 5 cm and higher.  A total of 59 families comprised of 274 species and 948 trees individuals were recorded. The aboveground biomass stand at 260 Mg ha?¹. Species Elateriospermum tapos was predominant, and family Dipterocarpaceace dominated the forest fringe.   Based on the calculated indices, species diversity and richness were considered high, while the dispersion of individual trees was random but unevenly distributed. Natural regeneration in the forest fringe is sustainable. The forest structure and species composition are intact, and without significant disturbance, the whole forest fragment is self-sustain.
Comparison of four species diversity indices in mangrove community Hanjar Mulya; Yanto Santosa; Iwan Hilwan
Biodiversitas Journal of Biological Diversity Vol. 22 No. 9 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220906

Abstract

Abstract. Mulya H, Santosa Y, Hilwan I. 2021. Comparison of four species diversity indices in mangrove community. Biodiversitas 22: 3648-3655. Mangrove communities have a tidal environment that affects their species composition, which may be finite but the abundance may vary between species individuals. Many ecologists have used indices to measure species diversity without knowing the best suitable index for the community and its statistical characteristics. Therefore, this study aimed to compare species diversity indices in mangrove communities to obtain the best and most appropriate index for mangrove diversity. The comparison was done using the Simpson (1-D), Shannon, Menhinick, and Margalef indices, which were widely used and considered the best measures in various communities. The data was obtained from the field sampling using a single plot of 80×40 m2, and then it was simulated to obtain standardized variables so that the indices got the same treatment. It was calculated with descriptive statistics and species diversity indices among other Simpson, Margalef, Shannon, and Menhinick indices. Pearson correlation and UPGMA cluster were used to get conformity based on the best index criteria. The results showed the Margalef index was the best in performance that passed the assessment criteria more than Simpson (1-D), Shannon, and Menhinick index. It had a low correlation with sample variance and normality marker but had high variability of the index value. It was also sensitive to the number of species, good reduced individual sample, and good correlation with similar indices. Thus, we concluded that the Margalef index was the best index for mangrove community diversity measurement. The index was recommended for monitoring and evaluating the species diversity assessment for the mangrove community. It should not use several species diversity indices with similar meaning.
Pig (Sus scrofa domesticus) dung and their associated fungi: Potential candidates for bio-remediation and nutrients improvement of crude oil contaminated soils David Nwazuo Enyiukwu; INENESIT N. BASSEY; GRACE AMARACHI NWAOGU; N.U. ASAMUDO; LWANGA AZUBUIKE CHUKWU; E.A. MONDAY; JACQUELINE O. MARANZU
Biodiversitas Journal of Biological Diversity Vol. 22 No. 8 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220822

Abstract

Abstract. Enyiukwu DN, Bassey IN, Nwaogu GA, Asamudo NU, Chukwu LA, Monday EA, Maranzu JO. 2021. Pig (Sus scrofa domesticus) dung and their associated fungi: Potential candidates for bio-remediation and nutrients improvement of crude oil contaminated soils. Biodiversitas 22: 3276-3286. Pig dung a common agro-waste material in Nigeria is associated with many fungal saprophytes.  Rising oil spillages and pollution in Nigeria have made cultivation of affected agro-lands un-rewarding. Potentials of pig dung in mitigating crude oil pollution in agro-soils are herein studied. The objectives of this study were to characterize the fungal profile associated with wet and dry dung of pig. And to evaluate the remediating impacts of pig dung and their associated fungi on crude oil and heavy metals contents, physicochemical properties, and phytotoxicity of crude oil polluted soils. Coprophilous fungi were isolated from wet and dry dung by moist chamber technique and identified. Utisoil from Umudike was polluted with crude oil, amended with 10-40% of dry pig dung and sown with soybean (Glycine max L.). The amended and un-amended crude oil contaminated utisols were analyzed to reduce crude oil and heavy metals contents; and physicochemical properties at planting, and harvesting, respectively, using classical and spectrometric methods, and the extent of crude oil and heavy metals removal determined. The percentage germination, height, number of leaves, leaf color, vigor, and biomass of the test crop were recorded from the test plant. The results showed that Aspergillus candidus, Sclerotium sp., Absidia sp., Acremonium sp., Candida tropicalis, C. pseudotropicalis, and Rhizopus oryzae were consistently isolated from the dry dung specimen than the wet one. The results also indicated that the treatments significantly reduced the treated soils' crude oil and heavy metals contents. It revealed that values obtained for residual oil or heavy metals contents of the treated soils and crop performance were inversely and directly related to levels of soil amendment respectively. Crop performance in the amended soil remained statistically (P?0.05) higher compared to the control. Soil analyses showed that the dung treatments significantly increased the values of nitrogen, phosphorus, potassium, organic carbon, etc. in a directly proportional manner. Therefore, pig dung and their associated fungi hold strong potentials as cheap eco-friendly platforms to provide and stimulate microbial growth, hasten degradation and removal of crude oil and heavy metals from contaminated soils; and thus permit and sustain good performance of arable crops.
Reproductive traits and spawning activity of striped eel catfish (Plotosidae) in Kolono Bay, Indonesia Asriyana Asriyana; Halili Halili
Biodiversitas Journal of Biological Diversity Vol. 22 No. 7 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d220756

Abstract

Abstract. Asriyana A, Halili H. 2021. Reproductive traits and spawning activity of striped eel catfish (Plotosidae) in Kolono Bay, Indonesia. Biodiversitas 22: 3020-3028. Reproduction is a natural process for a species to ensure its sustainability in nature. This study aimed to investigate the reproductive traits and spawning activity of the striped eel catfish in Kolono Bay, South Konawe District, Southeast Sulawesi, Indonesia. A total of 965 individuals were collected monthly from June 2020 to May 2021 by using bottom experimental gillnets. Spent/spawning stages of the male and female fish were found during the East season (June-August). The proportions of the spent/spawning stages of male and female fish were 60% and 55.56% and the values of the gonadal somatic index were 1.19 ± 0.53 and 2.19 ± 3.47, respectively during the East season, indicate occurring the peak spawning in this season. Females matured gonads more rapidly at 198.3 mm compared to males at 224.5 mm. Female fecundity was 1,730 ± 390 eggs, with an egg diameter of about 0.11-1.35 mm. Striped eel catfish is a total spawner fish that has one mode of egg distribution pattern. During the East season, it needs protection for spawning. The findings will help in designing effective management and developmental strategies to conserve the striped eel catfish population in the future.
Short Communication: Bacillus endolithicus and Bacillus paramycoides: New isolates from housefly Musca domestica in Saudi Arabia dina Ezzat Elghwas; ABIR S. AL-NASSER; AISHA A. AL-SHEIKHY
Biodiversitas Journal of Biological Diversity Vol. 22 No. 10 (2021)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d221011

Abstract

Abstract. El-Ghwas DE, Al-Nasser AS, Al-Sheikhy AA. 2021. Short Communication: Bacillus endolithicus and Bacillus paramycoides: New Isolates from housefly Musca domestica in Saudi Arabia. Biodiversitas 22: 4209-4214. Housefly Musca domestica Linnaeus is a common insect widely distributed all over the world. It is one of the domestic insects found associated with humans and animals. The present study investigated the bacterial diversity associated with Musca domestica samples collected from different places such as food courts and trash cans near fast-food restaurants in Makkah Province from October 2019 to December 2019. Eighteen pure isolates of bacterial strains were isolated and identified by Gram staining. Most of the bacterial isolates were Gram-positive except for two species, which were Gram-negative. The VITEK system was used to identify randomly isolate no. 5, 7, 17, 18, and 29. The results revealed that they belonged to the genus Bacillus sp., Staphylococcus sp., Pseudomonas sp., and Micrococcus sp. respectively. Due to the most isolated strains were Bacillus sp., so 16S RNA was used to genetically identify novel isolated strains 5 and 7. Isolate no. 5 showed the highest similarity (99 %) with Bacillus endolithicus, and isolate no. 7 showed the highest similarity (99 %) with Bacillus paramycoides. This is the first record of Bacillus endolithicus and Bacillus paramycoides to be isolated from the house fly Musca domestica L.

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