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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
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First ectomycorrhizal syntheses between Astraeus sirindhorniae and Dipterocarpus alatus (Dipterocarpaceae), pure culture characteristics, and molecular detection NUTTIKA SUWANNASAI; PREEYAPORN DOKMAI; AKIYOSHI YAMADA; ROY WATLING; CHERDCHAI PHOSRI
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210130

Abstract

Abstract. Suwannasai N, Dokmai P, Yamada A, Watling R, Phosri C. 2020. First ectomycorrhizal syntheses between Astraeus sirindhorniae and Dipterocarpus alatus (Dipterocarpaceae), pure culture characteristics, and molecular detection. Biodiversitas 21: 231-238. This study provides the first mycorrhization of Astraeus sirindhorniae and its cultural characteristics on nutrient media. An attempt has been made to introduce spore suspension and mycelial inocula of A. sirindhorniae onto seedlings of Dipterocarpus alatus. After 6 months seedlings were harvested, measured for growth and morphological descriptions of the ectomycorrhizas formed with D. alatus seedlings were made. The fungus has increased the growth of D. alatus seedlings. Further, it can be confirmed that the primers designed (GAPK126F/GAPK379R) have been successful when applied for the detection of ectomycorrhizal formation of A. sirindhorniae in vivo.
Diversity of medicinal plants utilized by To Manui ethnic of Central Sulawesi, Indonesia Nuning Rahmawati; FANIE INDRIAN MUSTOFA; SARI HARYANTI
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210145

Abstract

Abstract. Rahmawati N, Mustofa FI, Haryanti S. 2020. Diversity of medicinal plants utilized by To Manui ethnic of Central Sulawesi, Indonesia. Biodiversitas 21: 375-392. The present study reports the utilization of medicinal plants as medicines for the treatment of various diseases among the people of To Manui tribe in Central Sulawesi Province of Indonesia. Data collecting was conducted based on purposive random sampling to five selected traditional healers who fulfilled some inclusion criteria. The results showed as of 89 species of medicinal plants distributed in 50 families and 80 genera have been documented to have any pharmacological effects against 37 diseases and illnesses. Curcuma longa L. was determined as the most frequent medicinal plant used by traditional healers in To Manui for treating diabetes mellitus as well as after-birth treatment. However, conservation of some medicinal plants needs to be initiated in the study area especially Alstonia scholaris (L.) R. Br. as it is recognized in International Union for Conservation of Nature (IUCN) Red List as Least Concern (LC) of conservation status.
Antimicrobial potential of Pediococcus acidilactici from Bekasam, fermentation of sepat rawa fish (Tricopodus trichopterus) from Banyuasin, South Sumatra, Indonesia sri Melia; Endang Purwati; Yulianti Fitri Kurnia; Dhiva Rezzy Pratama
Biodiversitas Journal of Biological Diversity Vol. 20 No. 12 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d201210

Abstract

Abstract. Melia S, Purwati E, Kurnia Y. F, Pratama D. R. 2019. Antimicrobial potential of Pediococcus acidilactici from Bekasam, fermentation of sepat rawa fish (Tricopodus trichopterus) from Banyuasin, South Sumatra, Indonesia. Biodiversitas 20: 3532-3538. This study aimed to determine the antimicrobial potential of lactic acid bacteria isolated from bekasam. Bekasam is a result of sepat rawa fermentation from Banyuasin District, South Sumatra, Indonesia. The results showed that the morphological and biochemical properties of lactic acid bacteria were Gram-positive and cocci, negative catalase and included in homofermentative groups. The biggest antimicrobial activity was shown by bekasam isolate to Escherichia coli O157: H7 (21.26 mm), followed by Staphylococcus aureus ATCC25923 (18.23 mm) and Listeria monocytogenes CFSAN004330 (5.10 mm), while diameter barriers for crude bacteriocin supernatant isolates lactic acid bacteria to Escherichia coli O157: H7, Staphylococcus aureus ATCC25923 were 14.99 mm, 17.69 mm, and Listeria monocytogenes CFSAN004330 had no antimicrobial activity at neutral pH. The results of molecular identification with 16S rRNA showed that lactic acid bacteria isolated from bekasam isolate have similarity with Pediococcus acidilactici strain PB22 that has antimicrobial potential against pathogenic bacteria and potential as bio preservatives.
Growth rate of Acropora formosa coral fragments transplanted on different composition of faba kerbstone artificial reef ruly isfatul khasanah; ENDANG YULI HERAWATI; ANIK MARTINAH HARIATI; MOHAMMAD MAHMUDI; AIDA SARTIMBUL; DEWA GEDE RAKA WIADNYA; EVRON ASRIAL; YUDATOMO; ERRY NABIL
Biodiversitas Journal of Biological Diversity Vol. 20 No. 12 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d201218

Abstract

Abstract. Khasanah RI, Herawati EY, Hariati AM, Mahmudi M, Sartimbul A, Wiadnya DGR, Asrial E, Yudatomo, Nabil R. 2019. Growth rate of Acropora formosa coral fragments transplanted on different compositions of faba kerbstone artificial reef. Biodiversitas 20: 3593-3598. A counter measure and an alternative technique to reduce coral reef destruction is through transplantation, which requires the relocation or cutting of a live coral, planted in a designated place containing damaged varieties. Faba kerbstone is a product innovation similar to paving block/brick, made from fly and bottom ash (FABA), which is the dominant waste product from PT Jawa Power, Probolinggo, Indonesia. In addition, it has also been widely utilized as a raw material in the creation of paving and concrete blocks, composed by harmless material, with a length, width, and height of 40, 25 and 15 cm, respectively. This study aims to observe the growth rate of Acropora formosa coral fragments transplanted on a faba kerbstone, using five different fly and bottom ash compositions: K1 = 0% Fa, K2 = 25% Fa and 75% Ba, K3 = 50% FA and 50% Ba, K4 = 75% Fa and 25% Ba, while K5 = 100% Fa and 0% Ba. Furthermore, the observations were conducted underwater, using scuba diving for six months, observing the parameters of fragment length, colony diameter, and branches number. In addition, the highest elongation rate of A. formosa coral fragments was identified at K2 (1.313 ± 0.447 cm/month), and K1 (1.185 ± 0.642 cm/month), while the most significant increment in colony diameter was observed in K2 (0.077 ± 0.060 cm/month) and K1 (0.063 ± 0.071 cm/month), and the largest number of branches was also found in K2 (29.50 or 4.28 branches/month) and K1 (25.25 or 3.67 branches/month). Furthermore, the one-way ANOVA and Tukey's HSD test (p = 0.05) showed was no significant difference in the fragments elongation and colony diameters in the K1 and K2 models, although there was substantial variation from the K3, K4, and K5.
Supporting plant diversity and conservation through landscape planning: A case study in an agro-tourism landscape in Tampusu, North Sulawesi, Indonesia Fabiola Baby Saroinsong
Biodiversitas Journal of Biological Diversity Vol. 21 No. 4 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210432

Abstract

Abstract. Saroinsong FB. 2020. Supporting plant diversity and conservation through landscape planning: a case study in an agro-tourism landscape in Tampusu, North Sulawesi, Indonesia. Biodiversitas 21: 1518-1526. Plants are one of the living elements of a landscape which have dynamic characteristics. In the green/vegetation concept, the diversity of plants becomes vital in landscape planning to articulate the ecological, socio-cultural, and economic aspects in effort to mitigate biodiversity loss. The aim of this study is to illustrate the application of the green concept when planning an agro-tourism landscape in Tampusu region, North Sulawesi, Indonesia which demonstrates the function and utilization of plants in landscape management while paying attention to plant diversity. Data collection was conducted by field surveys, interviews, and literature studies. Data collected and analyzed included the existing conditions of site, site history, planning goal, topography, flora and fauna, climate, existing facilities and utilities, and area management. Based on its function, the green concept in landscape planning in Tampusu agro-tourism grouped plant diversity into four functions, namely production, ecological, architectural, and aesthetic functions. The ecological aspect of plant species selection (both existing species and added species) was based on the consideration of the plant's function in the landscape with special consideration of its contribution to plant diversity and conservation including those considered as endemic species. There are architectural function for examples Goodyera celebica, Racemobambos celebica, Ficus minahassae, Pterospermum celebicum, Diospyros celebica; ecological function for examples F. minahassae, Clerodendrum minahassae, Vatica celebica, Myristica minahassae, Diospyros minahassae, Korthalsia celebica, Licuala celebica, Aquilaria beccariana, Kibatalia wigmanii, Lithocarpus celebica; production function for examples Musa celebica, Musa acuminafe; aesthetic function for examples C. minahassae, Ixora celebica, D. celebica, R. celebica, Phalaenopsis celebensis. This study demonstrates that the application of the green concept in landscape planning can help to translate plant diversity and conservation into management actions, especially in agro-tourism landscape.
Biomass and carbon distribution on Imperata cylindrica grasslands Syahrinudin Syahrinudin; Manfred Denich; Mathias Becker; Wahjuni Hartati; Paul LG Vlek
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210111

Abstract

Abstract. Syahrinudin, Denich M, Becker M, Hartati W, Vleg PLG. 2020. Biomass and carbon distribution on Imperata cylindrica grasslands. Biodiversitas 21: 74-79. Invasive plants can alter the diversity and composition of ecological communities leading to ecosystem change both function and biodiversity issues. Imperata cylindrica is an invasive grass thrives on wide range of soil fertility and climatic condition forming a vast grassland area of this species. Conversion of such lands into agriculture and plantation is costly and high capital demanding. This work was devoted to investigate CO2 mitigation potential of the conversion I. cylindrica grassland to plantations in Sumatra and East Kalimantan, Indonesia. Stratified sampling technique was applied for the determination of biomass and carbon stock of the system studied. Results show that I. cylindrica grassland stored only a relatively small amount of biomass C (5.9-7.6 mg ha-1) implying that conversion into a more C-rich tree-based system would be promising tool to enhance C sequestration. Soil C content at both study sites decreased significantly with depth from the top 15 cm to the 3-m depth and was considerably higher in East Kalimantan than in Sumatra. Provided similar land-use history, the differences in soil C are likely to be related to the level prior to the invasion. Roots of I. cylindrica extended to a maximum depth of only 180 cm, but most of these roots being confined to the topsoil, little organic material is deposited in deeper layers. Despite the dense mat of rhizomes, the extent of C stored in the topsoils was modest. As sequestration is of global concern, the conversion of this grassland into systems with higher biomass accumulation and deeper root penetration is required.
The ability of indigenous Bacillus spp. consortia to control the anthracnose disease (Colletrotricum capsici) and increase the growth of chili plants Yulmira Yanti; HASMIANDY HAMID; REFLIN; WARNITA; TRIMURTI HABAZAR
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210123

Abstract

Abstract. Yanti Y, Hamid H, Reflin, Warnita, Habazar T. 2019. The ability of indigenous Bacillus spp. consortia to control the anthracnose disease (Colletrotricum capsici) and increase the growth of chili. Biodiversitas 21: 179-186. Anthracnose disease caused by Colletotrichum capsici can reduce yields of chili up to 80%. The control of anthracnose disease is generally carried out using synthetic fungicides. However, the use of these fungicides can pollute the environment and harm human health. One alternative control that needs to be developed is the use of Bacillus spp. as a biocontrol agent. The study was conducted to obtain an indigenous Bacillus spp. consortium that compatible as a biological agent for the control of the anthracnose diseases and promoting the growth of chili plants. The experiment was arranged as a completely randomized design, consisted of three stages, namely: 1) inhibitory test of indigenous Bacillus spp. against C. capsici in vitro, 2) compatibility test of indigenous Bacillus spp. and 3) Test of indigenous Bacillus spp.consortium for controlling C. capsici and promoting the growth of chili. The results showed that eight species of indigenous endophytic bacteria could inhibit the growth of C. capsici in vitro. All combinations of indigenous Bacillus spp. were compatible for controlling C. capsici. Four combinations of Bacillus spp. were able to increase the growth of chili plants. K1 consortium (Bacillus pseudomycoides strain SLBE 3.1 AP, Bacillus thuringiensis strain SLBE 2.3 BB, Bacillus toyonensis strain AGBE 2.1 TL) was the best consortium for controlling C. capsici.
Geographic distribution of the invasive mealybug Phenacoccus manihoti and its introduced parasitoid Anagyrus lopezi in parts of Indonesia Muhammad Zainal Fanani; Aunu Rauf; Nina Maryana; Ali Nurmansyah; Dadan Hindayana
Biodiversitas Journal of Biological Diversity Vol. 20 No. 12 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d201238

Abstract

Abstract. Fanani Z. M., Rauf A, Maryana N, Nurmansyah A, Hindayana D. 2019. Geographic distribution of the invasive mealybug Phenacoccus manihoti and its introduced parasitoid Anagyrus lopezi in parts of Indonesia. Biodiversitas 20: 3751-3757. Cassava mealybug, Phenacoccus manihoti Matile-Ferrero (Hemiptera: Pseudococcidae), is an invasive pest detected for the first time in Indonesia in 2010. An exotic parasitoid Anagyrus lopezi (De Santis) (Hymenoptera: Encyrtidae) was introduced and released in 2014 to control the pest. Study was conducted with the objective to determine the geographic distribution of P. manihoti and spread of A. lopezi. Field surveys were conducted on cassava fields in various locations in Lampung, Java, and Nusa Tenggara. Our studies showed that P. manihoti was found to be widely distributed in Lampung, Banten, West Java, Central Java, East Java, West Nusa Tenggara and East Nusa Tenggara. In each location visited, symptoms of P. manihoti infestation as indicated by internode distortion and bunchy top were prominent. Three years following release, parasitoid A. lopezi has established and spread into several cassava growing areas, except East Nusa Tenggara. Parasitism rates varied from 1.50% in West Nusa Tenggara up to 59.18% in East Java. Logistic regression revealed that probability of severe damage by the cassava mealybug was significantly (P<0.05) increased with the increasing abundance of ants.
The impacts of bark harvesting on a population of Encephalartos transvenosus (Limpopo cycad), in Limpopo Province, South Africa Samuel Bamigboye; M. PETER TSHISIKHAWE
Biodiversitas Journal of Biological Diversity Vol. 21 No. 1 (2020)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d210102

Abstract

Cycads are the most threatened group of plants in the world and there are a wide range of ecological and anthropological forces responsible for the extinction risk of these taxa. South Africa is a global hotspot of cycad diversity and the country’s cycads are facing high extinction risk. In this study we sampled a population (n=34) of Encephalartos transvenosus Stapf & Burtt Davy, a cycad species endemic to Limpopo Province, South Africa. The population was located on the Soutpansberg mountain range in the Mutale local municipality. A survey was conducted to quantify the threats to the population.  Forty-seven percent of the plants had been damaged by bark harvesting for traditional medicine, and the population showed a mortality rate of 9%. We recommend further studies at a range of Encephalartos transvenosus populations to provide a broader understanding of impacts of harvesting and population trends. We also recommend community based initiatives to enhance the protection of this species in the communities in which they are found.
Biodiversity and distribution of groundwater fauna in the Oum-El-Bouaghi region (Northeast of Algeria) Hichem Khammar; HADJAB RAMZI; MERZOUG DJEMOI
Biodiversitas Journal of Biological Diversity Vol. 20 No. 12 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d201213

Abstract

Abstract. Hichem K, Ramzi H, Djemoi M. 2019. Biodiversity and distribution of groundwater fauna in the Oum-El-Bouaghi region (Northeast of Algeria). Biodiversitas 20: 3553-3558. This study concerns the aquatic fauna of wells and springs in north of the city of Oum El Bouaghi, in the western part of the Tamlouka plain, north-eastern Algeria. 16 wells and two springs were selected and a seasonal sampling of the aquatic fauna was carried out from September 2017 to May 2018, covering periods of high and low water. Two types of traps were used: the phreatobiological net and baited traps. The composition of fauna was found to be 26 taxa and 6617 individuals, dominated by Crustaceans 47% followed by insects and shellfish 23% for each. Only one stygoby species was collected mainly: Pseudoniphargus djemoi.

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