cover
Contact Name
Isna Rasdianah Aziz
Contact Email
isna-rasdianah@uin-alauddin.ac.id
Phone
+6285242001984
Journal Mail Official
biogenesis@uin-alauddin.ac.id
Editorial Address
Department of Biology, Faculty of Science and Technology, Universitas Islam Negeri Alauddin Makassar. Jl. H.M. Yasin Limpo No. 36 Samata, Gowa, South Sulawesi, Indonesia. 92113
Location
Kab. gowa,
Sulawesi selatan
INDONESIA
Biogenesis: Jurnal Ilmiah Biologi
ISSN : 23021616     EISSN : 25802909     DOI : https://doi.org/10.24252/bio
Biogenesis: Jurnal Ilmiah Biologi is a peer-reviewed and open-access journal that publishes original scientific work with the advancement of tropical bioscience in Asia. The integration between Islam and tropical bioscience explicitly represents the Biogenesis: Jurnal Ilmiah Biologi as an academic publication for Islamic scientists, which could contribute to the advancement of tropical biology studies in the Islamic world. The journal invites research articles, short communication, critical and comprehensive scientific reviews concerning tropical biosciences in Asia, specifically in the following subjects: Islamic-integrated tropical bioscience Tropical biodiversity and conservation Biosystematics of tropical species Biochemistry and physiology of tropical species Ecological study and behavior of tropical species Tropical genetics, biotechnology, and bioinformatics
Articles 332 Documents
Inventarisasi Selaginellaceae di Hutan Lindung Aek Nauli Parapat Sumatera Utara Jamilah Nasution; Ida Fauziah; Ferdinand Susilo
Biogenesis: Jurnal Ilmiah Biologi Vol 5 No 2 (2017)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v5i2.3941

Abstract

This research aims to determine the types of Selaginella in the field and to know the existence of species within a community. This study was conducted by collecting specimens from the field followed by inventory and identification of Selaginella species, as well as recording environmental conditions.The results of this study obtained 5 types of Selaginella: Selaginella intermedia, Selaginella kityyae, Selaginella longariastata, Selaginella ornata and Selaginella willdenovii. Based on their habitat Selaginella intermedia, Selaginella kityyae, Selaginella longariastata and Selaginella willdenovii found in field, have a terrestrial habitus spread, whereas Selaginella ornata is an upright epilithic terrestrial, with each species found mostly in clusters and dominate in an area.
Khamir Penghasil Indole-3-Acetic Acid dari Rhizosfer Anggrek Tanah Pecteilis susannae (L.) Rafin Titi Lasmini; Endang Sutariningsih Soetarto
Biogenesis: Jurnal Ilmiah Biologi Vol 2 No 1 (2014)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v2i1.468

Abstract

Indole-3-acetic acid (IAA) is a growth hormone produced by plants. Several types of yeast has been reported to produce these hormones, and generally produce IAA in an higher amount than in plants. The purpose of this study is to get the yeast producing indole-3-acetic acid in the rhizosphere soil orchid Pecteilis susannae (L.) Rafin and to test the ability of yeast isolates to form IAA on medium L-tryptophan given as precursors. Yeasts were isolated and tested for their ability to produce IAA in vitro. The results showed that there are four potential yeast isolates that produce IAA which are isolates K2, U5, A3, and A1. Highest concentration of IAA was produced by A3 isolates grown on a medium containing GPB 200 ug / ml of L tryptophan in the amount of 56.262 g/ml.Keywords: Indole-3-acetic acid, rhizosfer yeast, Pecteilis susannae
Analisis Kandungan Vitamin Pada Melon (Cucumis melo L.) Kultivar Melodi Gama 1 dan Melon Komersial Budi S Daryono; Sigit Dwi Maryanto; Sholihatun Nissa; Ganies Riza Aristya
Biogenesis: Jurnal Ilmiah Biologi Vol 4 No 1 (2016)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v4i1.1113

Abstract

As many as 50 million people worldwide are currently experiencing a deficiency of vitamin A and about 250000-500000 malnourished children in developing countries become blind each year from vitamin A deficiency, with the highest prevalence in Southeast Asia and Africa which will result in visual impairment, and increased child mortality and pregnant women. Melon can be one of the solutions for higher productivity and fruit may contain carotene (pro-vitamin A) with varying levels. In the years 2009-2011 Genetics laboratory, faculty of Biology UGM has produced a new melon cultivar called Melodi Gama 1 (MG 1). MG 1 phenotype has a rounded character with rather thick rind and hard, green and fleshy with a smooth orange flesh color. The purpose of this research was to study and analyze the nutritional content of MG 1 compared to commercial cultivars from multilocation and multiseason cultivation. The methods were used vitamin A quantitative analysis by extraction and spectrophotometer, whereas vitamin C in quantitative analysis using the iodine titration method. The results obtained in the analysis of total carotene in the dry season for the MG 1 has the highest value compared with 4 other commercial cultivars, it was 706.61 μg/100gr for cultivation in Yogyakarta and 292.16 μg/100gr for cultivation in Magetan. In the rainy season total carotene MG 1 was 59.88 μg/100gr for cultivation in Yogyakarta, and 20.76 μg/100gr for cultivation in Magetan. The results of the quantitative analysis of vitamin C MG 1 in the dry season was 7.50 mg/100gr for cultivation in Yogyakarta and 16.50 mg/100gr for cultivation in Magetan, while the rainy season was 8.55 mg/100gr for cultivation in Yogyakarta and 6.75 mg/100gr for cultivation in Magetan. Based on these results it can be concluded that the content of Vitamin A and C from Melodi Gama 1 cultivar is higher in the dry season than in the rainy season.
Deteksi Gen Ketahanan Terhadap Powdery Mildew Pada Melon (Cucumis melo L. ‘Aramis’) Budi Setiadi Daryono; Hani Christin Yambise
Biogenesis: Jurnal Ilmiah Biologi Vol 6 No 2 (2018)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v6i2.5068

Abstract

Melon (Cucumis melo L.) usually used as a fresh fruit, which contained high vitamin C and in Indonesia melon is one of the favorite fruit. Indonesia is a country that has a high biodiversity. One of the potential strategies in order to improve productivity and quality of crops competitiveness is through plant breeding. This study used melon Aramis from PT East West Seed Indonesia hybrid melon from crosses between 7319 (F) with 7347 (M). The research aims to determine the phenotype character of melon cultivar Aramis and to detect powdery mildew resistance gene. The research is conducted in Pusat Inovasi Agro Teknologi (PIAT UGM) Yogyakarta and at the Laboratory of Genetics and Breeding Faculty of Biology, Universitas Gadjah Mada. Resistance genes detection is conducted by Sequence Characterized Amplified Regions method (SCARs) using PCR and showed negative result of Aramis cultivar on detection of gene resistance to powdery mildew.
Karakterisasi Udang Air Tawar Anggota Genus Macrobrachium Bate, 1868 (Decapoda: Palaemonidae) dari Air Terjun Tegenungan, Gianyar, Bali Berbasis Data Morfologi dan Molekular Wildan Ahmad Nabil; Rury Eprilurahman
Biogenesis: Jurnal Ilmiah Biologi Vol 6 No 2 (2018)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v6i2.5135

Abstract

Macrobrachium is one of prawn genera which has largest species number in family Palaemonidae, with some species of this genus being important commodity in aquaculture. Morphological characters for identification of this genus depend on environmental condition, growth phase, sex, and social dominance. This makes morphological identification on this genus quite difficult and tricky. Alternative approaches are required for better methods of Macrobrachium identification. DNA barcoding using 16S mitochondrial rRNA appears to be one promising method for Macrobrachium identification. This research aims to identify Macrobrachium from Tegenungan Waterfall using morphological and molecular analysis. Samples were taken from 4 sampling sites beneath the waterfall. All specimens were identified using several morphological identification methods. Specimen CR 07a and CR 10 were identified using molecular method. The molecular analysis utilized 16Sar (5’-CGCCTGTTTATCAAAAACAT-3’) as forward primer and 16Sbr (5’-CCGGTCTGAACTCAGAT-CACGT-3’) as reverse primer. From 11 specimens, 10 were identified as Macrobrachium. Specimen CR 07a was identified morphologically as M. horstii. According to BLAST analysis, specimen CR 10 was recognized as M. horstii with similarity up to 99% to GenBank specimens (JF310718.1 dan FM986616.1). Specimen CR 07a only reach 97% similarity to both GenBank specimens. Genetic distance analysis between specimen CR 07a and CR 10 assumed high genetic diversity, or even cryptic species indication in M. horstii population of Tegenungan Waterfall.  
Vegetasi Tumbuhan pada Kawasan Tepi Hutan Taman Nasional Gunung Gede Pangrango yang Berbatasan dengan Kebun Raya Cibodas Musyarofah Zuhri; Zaenal Mutaqien; Dian R Nurdiana; Destri Destri; Nudin Nudin; Djuanda Djuanda
Biogenesis: Jurnal Ilmiah Biologi Vol 6 No 2 (2018)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v6i2.5010

Abstract

Cibodas Botanic Garden area is adjacent with natural forest of Mt. Gede Pangrango National Park which consequences both vegetation in the border area are influence each other. The aims of this research were to study plant vegetation of forest area adjacent to Cibodas Botanical Garden and compare it with forest interior using transect method. The results showed that species richness in forest interior were higher than adjacent forest area. Furthermore, number of tree species, basal area and Shannon-Wienner diversity index in forest boundaries were higher rather than forest interior. Habitats along the forest edge were inhabited by trees with large dbh and low tree density. While trees inhibited forest interior areas with high density but small in size. The trees in forest interior were dominated by Schima wallichii, Lithocarpus pallidus and Turpinia sphaerocarpa. While trees in the forest boundary vegetation were dominated by Engelhardtia spicata, Litsea firma and Lithocarpus indutus. The tree age structure of forest interior and forest edge showed an inverted J-pattern and flat pattern respectively. Meanwhile, tree communities on edge forest vegetation showed similar age structure, especially in middle diameter class. 
Kestabilan Fenotip Tanaman Labu Susu (Cucurbita moschata (Duchesne) Poir “Butternut”) Hasil Budidaya di Sleman D.I Yogyakarta Hetty Nopianasanti; Budi Setiadi Daryono
Biogenesis: Jurnal Ilmiah Biologi Vol 6 No 2 (2018)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v6i2.4751

Abstract

Butternut pumpkin (Cucurbita moschata 'Butternut') is a horticultural commodity with great potential to be developed as food and medicine. Nutrients and unique shape cause butternut pumpkin to be popular. To supply of butternut pumpkin, required an increase in production which has superior and stable characters. This research aims to determine the stability phenotypic characters of butternut pumpkin in Sleman, Yogyakarta using quantitative data analysis of variance (One Way ANOVA) and qualitative analysis through descriptive phenotype. Based on the results, butternut pumpkin have a uniform phenotype characters but unstable in fruit’s shape and size of plant. Butternut pumpkin plants have 3 different shapes of pear or paprika form including dumbbell shape and gooseneck (pyriform), crispy texture, pale yellow (RHS greyed grange group 65) peel of fruit, strong orange (RHS orange group 24) flesh of fruit, 3-5°brix level of sweetness, long shelf life, and short harvest age (70-90 HST). The cultivated butternut pumpkin in PIAT UGM farmland has greater productivity of 3.1±0.99 kg/plant. 
Komposisi Nekleotida Sekuen Gen Mitokondria 16S rRNA Ikan Bilih (Mystacoleucus padangensis Bleeker, 1852) Danau Singkarak, Solok, Sumatera Barat Liza Oktavia; Tuty Arisuryanti
Biogenesis: Jurnal Ilmiah Biologi Vol 6 No 2 (2018)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v6i2.4855

Abstract

Bilih fish (Mystacoleucus padangensis) is one of the endemic fish inhabited at West Sumatra and is exploited extensively to meet market demands due to high nutritional value. The fish is also commonly exported to Malaysia and Singapore in dried processed form. However, research on composition of mtDNA 16S nucleotide as a part of genetic characterization of bilih fish has not been examined. Genetic characterization of the fish is useful for its conservation and breeding program. Therefore, the aim of this research was to determine composition of mtDNA 16S nucleotide of bilih fish (Mystacoleucus padangensis Bleeker, 1852) collected from Singkarak Lake, Solok, West Sumatra. This research used a PCR method with 16S universal primers: 16Sar and16Sbr. The results showed that the average of mtDNA 16S nucleotide composition was T=22.63%, C=24.38%, A=31.24% and G=21.76% whereas the average of A+T and C+G were 53.86% and 46.14% respectively. The difference in the mtDNA 16S nucleotide between the two bilih fish samples was similar between T, C, and A composition (0,04%) whereas the G composition was high (0,13%). In addition,  the average rate of nucleotide composition A+ T and G+ C between the two bilih fish samples was similar  (0,08%). This result revealed that there was genetic variation between the two bilih fish samples examined in this study based on composition of mtDNA 16S nucleotide which is the first published data we reported.  
Geometric Morphometrics Analysis of Chelae and Carapace of the Freshwater Prawn Macrobrachium Bate, 1868 Rich Gemilang Simanjuntak; Rury Eprilurahman
Biogenesis: Jurnal Ilmiah Biologi Vol 7 No 1 (2019)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v7i1.7803

Abstract

The shape of chelae and carapace can be used to distinguish between species of prawn. This study aims to determine the variations in the shape of chelae and carapace in several species belonging to the genus Macrobrachium using analysis of geometric morphometric. This study uses photos of specimens that have been processed with several TPS software. Data analyzed statistically by PCA using the MorphoJ software. Clustering analysis using UPGMA method using PAST software. The results showed the carapace shape grid deformation varied at the tip of the rostrum, the tip of the ocular spine and the lower curvature of the front of the carapace, and the base spines of rostrum. Grid deformation in the shape of chelae varies at the tip of the pollex, the junction between the pollex and the manus on the inferior margin of the propodus, the upper and lower points marking the junction of the dactylus with the propodus. PCA shows the total variation of the carapace shape is 82.66% which is divided into PC1: 75.11% and PC2: 7.55%. While the total variation of the shape of chelae is 87.56% which is divided into PC1: 55.49% and PC2: 32.07%. Clustering analysis shows the grouping of populations of Macrobrachium, the first group is M. latidactylus and M. sintangense, the second group includes M. horstii and M. latimanus. M. lar is a species that shows the similarity of the shape of the carapace and chelae with the two groups. M. rosenbergii and M. pilimanus are on different lines.
Toxicity of Bioactive Compound from Endophytic Fungi Isolated from Red Ginger (Zingiber officinale var. rubrum) Utilizing Brine Shrimp Lethality Assay Angga Prasetyo; Boy Rahardjo Sidharta; Yustina Sri Hartini; Exsyupransia Mursyanti
Biogenesis: Jurnal Ilmiah Biologi Vol 7 No 1 (2019)
Publisher : Department of Biology, Faculty of Sci and Tech, Universitas Islam Negeri Alauddin Makassar

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.24252/bio.v7i1.6000

Abstract

Red ginger (Zingiber officinale var. rubrum) has been proven to show anticancer activity. Direct use bioactive compound from red ginger has many obstacles such as large amount of red ginger’s rhizome needed, limitation of planting area, and very long time of harvesting. Utilization of endophytic fungi from red ginger’s rhizome could be an alternative to the problems. The aims of this study were to determine bioactive compound produced by endophytic fungi and toxicity activity based on LC50. Endophytic fungi were isolated from red ginger and were identified macroscopically and microscopically. The bioactive compounds were extracted using ethanol 96%. Flavonoid test was done qualitatively, bioactive compounds were analyzed by Thin Layer Chromatography (TLC), and the toxicity test was done using Brine Shrimp Lethality Assay (BSLA). The present research found two endophytic fungi isolated from red ginger rhizome. Isolate 1 was similar to Mucor sp. and isolate 2 was similar to Trichoderma sp. Phytochemical test revealed bioactive compound extracted from the isolates were contained flavonoid. TLC analysis did not detect quercetin from the bioactive compound extracted from the isolates. LC50 values of the bioactive compound from the isolates were 2.300 and 1.747 µg/ml, respectively. The toxicological results suggest that both isolates produce non-toxic compound to Artemia salina.