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Implementation of Chi-Square Feature Selection for Parkinson’s Disease Classification Using LightGBM Ahdyani, Annisa Salsabila; Budiman, Irwan; Kartini, Dwi; Farmadi, Andi; Mazdadi, Muhammad Itqan
IJCCS (Indonesian Journal of Computing and Cybernetics Systems) Vol 19, No 3 (2025): July
Publisher : IndoCEISS in colaboration with Universitas Gadjah Mada, Indonesia.

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/ijccs.107881

Abstract

Penyakit Parkinson merupakan penyakit yang disebabkan oleh kerusakan sel saraf otak dan termasuk penyakit yang jumlah kasusnya meningkat pesat di dunia. Salah satu cara yang dapat dilakukan untuk mencegah meningkatnya kasus penyakit Parkinson adalah dengan melakukan diagnosis melalui metode klasifikasi dengan pendekatan pembelajaran algoritmik. Penelitian ini mengimplementasikan teknik Chi-Square untuk pendekatan pemilihan fitur yang relevan dengan algoritma Light Gradient Boosting Machine (LightGBM) dalam klasifikasi penyakit Parkinson. Pemilihan fitur Chi-Square bertujuan untuk mengurangi fitur yang kurang relevan sehingga dapat meningkatkan hasil kinerja model. Selain itu, metode SMOTE diterapkan untuk menangani ketidakseimbangan data dan penyetelan hiperparameter guna menentukan kombinasi parameter yang optimal. Pengujian dilakukan terhadap sepuluh variasi jumlah fitur, dengan hasil terbaik diperoleh dengan menggunakan 200 fitur yang menghasilkan akurasi sebesar 96,05%. Dengan menggunakan metode Chi-Square, kinerja model LightGBM meningkat dibandingkan dengan kinerja tanpa pemilihan fitur. Penerapan kombinasi metode ini dapat meningkatkan kinerja model klasifikasi secara signifikan dan berpotensi untuk diterapkan dalam sistem pendukung diagnosis penyakit Parkinson.
Evaluation of the Impact of SMOTEENN on Monkeypox Case Classification Performance Using Boosting Algorithms Siena, Laifansan; Saragih, Triando Hamonangan; Nugroho, Radityo Adi; Kartini, Dwi; Muliadi; Caesarendra, Wahyu
Indonesian Journal of Electronics, Electromedical Engineering, and Medical Informatics Vol. 7 No. 2 (2025): May
Publisher : Jurusan Teknik Elektromedik, Politeknik Kesehatan Kemenkes Surabaya, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.35882/ijeeemi.v7i2.77

Abstract

Monkeypox is a zoonotic disease with increasing global prevalence, posing a significant challenge in healthcare. Its widespread transmission necessitates more accurate detection systems to assist medical professionals in diagnosing and managing cases effectively. One of the main challenges in developing monkeypox prediction models is class imbalance in datasets, which can cause models to favor the majority class and reduce predictive accuracy for rarer cases. To address this issue, this study evaluates the effectiveness of the SMOTEENN resampling technique in improving the classification performance of monkeypox cases. Three boosting algorithms Gradient Boosting, XGBoost, and LightGBM were applied to a monkeypox dataset consisting of 25,000 samples. The data preprocessing steps included handling missing values, feature encoding, and feature scaling. The dataset was then balanced using SMOTEENN, a hybrid technique combining the Synthetic Minority Over-sampling Technique (SMOTE) and Edited Nearest Neighbors (ENN). Additionally, hyperparameter tuning with GridSearchCV was performed to optimize model performance by systematically selecting the best parameter combinations. The results indicate that applying SMOTEENN significantly improved classification accuracy, achieving a maximum of 69%, with an F1-score of 67%. Compared to previous studies, the proposed approach demonstrated superior performance in handling class imbalance and enhancing classification robustness. These findings highlight the potential of SMOTEENN and boosting algorithms in medical data classification, particularly for infectious diseases with imbalanced datasets. This study contributes to the development of more reliable machine learning techniques for improving disease detection, classification accuracy, and overall model generalization. Future research should explore additional resampling techniques, deep learning architectures, and feature selection methods to further improve predictive performance in medical diagnostics.
Improving Diabetes Prediction Using Feedforward Neural Network with Adam Optimization and SMOTE Technique Wijaya Kusuma, Arizha; Mazdadi, Muhammad Itqan; Kartini, Dwi; Farmadi, Andi; Indriani, Fatma; P., Chandrasekaran
Indonesian Journal of Electronics, Electromedical Engineering, and Medical Informatics Vol. 7 No. 3 (2025): August
Publisher : Jurusan Teknik Elektromedik, Politeknik Kesehatan Kemenkes Surabaya, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.35882/ijeeemi.v7i3.127

Abstract

Diabetes mellitus is a chronic metabolic disorder that demands early and accurate detection to prevent life-threatening complications. Traditional diagnostic procedures, such as blood glucose tests and oral glucose tolerance tests, are often invasive, time-consuming, and resource-intensive, making them less practical for widespread screening. This study aims to explore the potential of artificial intelligence, specifically Feedforward Neural Networks (FNN), in predicting diabetes based on clinical data from the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK). The main contribution of this research lies in the application of the Adaptive Moment Estimation (Adam) optimization algorithm and the Synthetic Minority Oversampling Technique (SMOTE) to enhance the performance and generalization of the FNN on imbalanced medical datasets. The methodology involves preprocessing steps such as imputing zero values with feature means, normalizing input features using Min-Max scaling, and applying SMOTE to balance class distribution. Two model configurations were compared: a baseline FNN trained manually using full-batch gradient descent and a second FNN optimized using Adam. Experimental results demonstrated that the baseline model achieved an accuracy of 70.13%, precision of 56.06%, recall of 68.52%, and F1-score of 61.67%, while the Adam-optimized model achieved superior results with an average accuracy of 73.31%, precision of 60.97%, recall of 66.67%, and F1-score of 63.64% across ten independent runs. These findings indicate that combining adaptive optimization with oversampling significantly enhances the robustness and reliability of neural networks for medical classification tasks. In conclusion, the proposed method provides an effective framework for AI-assisted early diabetes detection and opens pathways for future development using deeper network architectures and explainable AI models for clinical applications.
Performance Comparison of AdaBoost, LightGBM, and CatBoost for Parkinson's Disease Classification Using ADASYN Balancing Anshari, Muhammad Ridha; Saragih, Triando Hamonangan; Muliadi, Muliadi; Kartini, Dwi; Indriani, Fatma; Rozaq, Hasri Akbar Awal; Yıldız, Oktay
Jurnal Teknik Informatika (Jutif) Vol. 6 No. 5 (2025): JUTIF Volume 6, Number 5, Oktober 2025
Publisher : Informatika, Universitas Jenderal Soedirman

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.52436/1.jutif.2025.6.5.4726

Abstract

Parkinson's disease is a neurodegenerative condition identified by the decline of neurons that produce dopamine, causing motor symptoms such as tremors and muscle stiffness. Early diagnosis is challenging as there is no definitive laboratory test. This study aims to improve the accuracy of Parkinson's diagnosis using voice recordings with machine learning algorithms, such as AdaBoost, LightGBM, and CatBoost. The dataset used is Parkinson's Disease Detection from Kaggle, consisting of 195 records with 22 attributes. The data was normalized with Min-Max normalization, and class imbalance was resolved with ADASYN. Results show that ADASYN-LightGBM and ADASYN-CatBoost have the best performance with 96.92% accuracy, 97.10% precision, 96.92% recall, and 96.92% F1 score. This improvement suggests that combining boosting methods and data balancing techniques can improve the accuracy of Parkinson's diagnosis. These results demonstrate the effectiveness of ADASYN in addressing data imbalance and improving the performance of boosting algorithms for medical classification problems. The findings contribute to the development of intelligent diagnostic systems in the field of medical informatics and computer science. These findings are essential for developing more accurate and efficient diagnostic tools, supporting early diagnosis and better management of Parkinson's disease.
Seleksi Fitur dengan Particle Swarm Optimization pada Klasifikasi Penyakit Parkinson Menggunakan XGBoost Kurnia, Deni; Itqan Mazdadi, Muhammad; Kartini, Dwi; Adi Nugroho, Radityo; Abadi, Friska
Jurnal Teknologi Informasi dan Ilmu Komputer Vol 10 No 5: Oktober 2023
Publisher : Fakultas Ilmu Komputer, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.25126/jtiik.2023107252

Abstract

Penyakit Parkinson merupakan gangguan pada sistem saraf pusat yang mempengaruhi sistem motorik. Diagnosis penyakit ini cukup sulit dilakukan karena gejalanya yang serupa dengan penyakit lain. Saat ini diagnosa dapat dilakukan menggunakan machine learning dengan memanfaatkan rekaman suara pasien. Fitur yang dihasilkan dari ekstraksi rekaman suara tersebut relatif cukup banyak sehingga seleksi fitur perlu dilakukan untuk menghindari memburuknya kinerja sebuah model. Pada penelitian ini, Particle Swarm Optimization digunakan sebagai seleksi fitur, sedangkan XGBoost akan digunakan sebagai model klasifikasi. Selain itu model juga akan diterapkan SMOTE untuk mengatasi masalah ketidakseimbangan kelas data dan hyperparameter tuning pada XGBoost untuk mendapatkan hyperparameter yang optimal. Hasil pengujian menunjukkan bahwa nilai AUC pada model dengan seleksi fitur tanpa SMOTE dan hyperparameter tuning adalah 0,9325, sedangkan pada model tanpa seleksi fitur hanya mendapat nilai AUC sebesar 0,9250. Namun, ketika kedua teknik SMOTE dan hyperparameter tuning digunakan bersamaan, penggunaan seleksi fitur mampu memberikan peningkatan kinerja pada model. Model dengan seleksi fitur mendapat nilai AUC sebesar 0,9483, sedangkan model tanpa seleksi fitur hanya mendapat nilai AUC sebesar 0,9366.   Abstract   Parkinson's disease is a disorder of the central nervous system that affects the motor system. Diagnosis of this disease is quite difficult because the symptoms are similar to other diseases. Currently, diagnosis can be done using machine learning by utilizing patient voice recordings. The features generated from the extraction of voice recordings are relatively large, so feature selection needs to be done to avoid deteriorating the performance of a model. In this research, Particle Swarm Optimization is used as feature selection, while XGBoost will be used as a classification model. In addition, the model will also be applied SMOTE to overcome the problem of data class imbalance and hyperparameter tuning on XGBoost to get optimal hyperparameters. The test results show that the AUC value on the model with feature selection without SMOTE and hyperparameter tuning is 0.9325, while the model without feature selection only gets an AUC value of 0.9250. However, when both SMOTE and hyperparameter tuning techniques are used together, the use of feature selection is able to provide improved performance on the model. The model with feature selection gets an AUC value of 0.9483, while the model without feature selection only gets an AUC value of 0.9366.
Kombinasi Seleksi Fitur Berbasis Filter dan Wrapper Menggunakan Naive Bayes pada Klasifikasi Penyakit Jantung Azizah, Siti Roziana; Herteno, Rudy; Farmadi, Andi; Kartini, Dwi; Budiman, Irwan
Jurnal Teknologi Informasi dan Ilmu Komputer Vol 10 No 6: Desember 2023
Publisher : Fakultas Ilmu Komputer, Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.25126/jtiik.2023107467

Abstract

Penyakit jantung menjadi salah satu penyebab utama kematian bersama dengan penyakit lainnya. Dalam bidang teknologi, data mining dapat digunakan untuk mendiagnosa suatu penyakit yang bersumber dari data rekam medis pasien. Pada klasifikasi dataset medis, Naive Bayes merupakan salah satu metode terbaik yang digunakan. Tujuan dari penelitian ini adalah untuk mengetahui perbandingan hasil akurasi dari Naive Bayes menggunakan beberapa seleksi fitur yaitu Forward Selection, Backward Elimination, kombinasi union hasil seleksi fitur Forwad Selection dan Backward Elimination, Information Gain, Gain Ratio, dan kombinasi union hasil seleksi fitur Information Gain dengan Gain Ratio. Data yang digunakan dalam penelitian ini adalah data penyakit jantung yang didapatkan dari UCI Machine Learning Repository. Dari implementasi pemodelan yang akan dilakukan menghasilkan nilai akurasi tertinggi sebesar 91.80% pada algoritma Naive Bayes dengan kombinasi union hasil seleksi fitur Information Gain dan Gain Ratio menggunakan perbandingan data latih dan data uji 80:20. Sedangkan akurasi Naive Bayes dengan kombinasi union hasil seleksi fitur Forward Selection dan Backward Elimination hanya memiliki nilai akurasi sebesar 83.61%   Abstract Heart disease is one of the leading causes of death along with other diseases. In the field of technology, data mining can be used to diagnose a disease sourced from patient medical record data. In the classification of medical datasets, Naive Bayes is one of the best methods used. The purpose of this study is to determine the comparison of the accuracy results of Naive Bayes using several feature selections, namely Forward Selection, Backward Elimination, a combination of union of Forwad Selection and Backward Elimination feature selection results, Information Gain, Gain Ratio, and a combination of union of Information Gain feature selection results with Gain Ratio. The data used in this research is heart disease data obtained from the UCI Machine Learning Repository. From the implementation of modeling that will be carried out, the highest accuracy value is 91.80% in the Naive Bayes algorithm with a combination of union of Information Gain and Gain Ratio feature selection results using a ratio of training data and test data of 80:20. While the accuracy of Naive Bayes with a combination of union selection results of Forward Selection and Backward Elimination features only has an accuracy value of 83.61%.  
Dimensionality Reduction Using Principal Component Analysis and Feature Selection Using Genetic Algorithm with Support Vector Machine for Microarray Data Classification Kartini, Dwi; Badali, Rahmat Amin; Muliadi, Muliadi; Nugrahadi, Dodon Turianto; Indriani, Fatma; Saputro, Setyo Wahyu
Indonesian Journal of Electronics, Electromedical Engineering, and Medical Informatics Vol. 7 No. 1 (2025): February
Publisher : Jurusan Teknik Elektromedik, Politeknik Kesehatan Kemenkes Surabaya, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.35882/mr7x9713

Abstract

DNA microarray is used to analyze gene expression on a large scale simultaneously and plays a critical role in cancer detection. The creation of a DNA microarray starts with RNA isolation from the sample, which is then converted into cDNA and scanned to generate gene expression data. However, the data generated through this process is highly dimensional, which can affect the performance of predictive models for cancer detection. Therefore, dimensionality reduction is required to reduce data complexity. This study aims to analyze the impact of applying Principal Component Analysis (PCA) for dimensionality reduction, Genetic Algorithm (GA) for feature selection, and their combination on microarray data classification using Support Vector Machine (SVM). The datasets used are microarray datasets, including breast cancer, ovarian cancer, and leukemia. The research methodology involves preprocessing, PCA for dimensionality reduction, GA for feature selection, data splitting, SVM classification, and evaluation. Based on the results, the application of PCA dimensionality reduction combined with GA feature selection and SVM classification achieved the best performance compared to other classifications. For the breast cancer dataset, the highest accuracy was 73.33%, recall 0.74, precision 0.75, and F1 score 0.73. For the ovarian cancer dataset, the highest accuracy was 98.68%, recall 0.98, precision 0.99, and F1 score 0.99. For the leukemia dataset, the highest accuracy was 95.45%, recall 0.94, precision 0.97, and F1 score 0.95. It can be concluded that combining PCA for dimensionality reduction with GA for feature selection in microarray classification can simplify the data and improve the accuracy of the SVM classification model. The implications of this study emphasize the effectiveness of applying PCA and GA methods in enhancing the classification performance of microarray data.
Effectiveness of SMOTE in Enhancing Adult Autism Spectrum Disorder Diagnosis Predictive Performance With Missforest Imputation And Random Forest Musyaffa, Muhammad Hafizh; Saragih, Triando Hamonangan; Nugrahadi, Dodon Turianto; Kartini, Dwi; Farmadi, Andi
Indonesian Journal of Electronics, Electromedical Engineering, and Medical Informatics Vol. 7 No. 2 (2025): May
Publisher : Jurusan Teknik Elektromedik, Politeknik Kesehatan Kemenkes Surabaya, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.35882/ijeeemi.v7i2.66

Abstract

Autism Spectrum Disorder (ASD), originally described by Leo Kanner in 1943, is a complex developmental condition that manifests through social, emotional, and behavioral challenges, often including speech delays and difficulties in interpersonal interactions. Despite significant advancements in diagnostic criteria over the years, accurate diagnosis of ASD in adults remains challenging due to limited access to comprehensive datasets and inherent methodological constraints. The Autism Screening Adult dataset used in this study exemplifies these issues, as it contains missing values and exhibits a marked class imbalance, both of which can adversely affect model performance. To address these challenges, we proposed a framework that integrates Random Forest classification with MissForest imputation and the Synthetic Minority Over-sampling Technique (SMOTE). MissForest effectively imputes missing data by employing an iterative random forest approach that preserves the underlying structure of the data without relying on strict parametric assumptions. Meanwhile, SMOTE generates synthetic samples for the minority class, thereby balancing the dataset and reducing prediction bias. Experimental evaluation through 10-Fold Cross Validation demonstrated that the application of SMOTE significantly enhanced model performance. Notably, the overall accuracy improved from 70.17% to 79.32%, and the AUC-ROC increased from 47.13% to 85.84%, indicating a robust improvement in the model’s ability to distinguish between positive and negative cases. These results underscore the critical importance of addressing data imbalance and missing values in predictive modeling for ASD. The promising outcomes of this study provide a solid foundation for developing more reliable diagnostic tools for adult ASD, and future research may further refine feature selection and incorporate additional data sources to optimize performance even further.
Improving nutrient prediction models with polynomial and ratio features and mRMR selection Indriani, Fatma; Budiman, Irwan; Kartini, Dwi; Handayani, Lilies
Bulletin of Electrical Engineering and Informatics Vol 14, No 2: April 2025
Publisher : Institute of Advanced Engineering and Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11591/eei.v14i2.9189

Abstract

Due to limited space and regulations, food labels often lack information on micronutrients, i.e., vitamins and minerals. Accurately predicting missing these micronutrient data is essential yet challenging. This study explores the feasibility of using machine learning to predict these missing nutrients based on a limited reported nutrient (protein and carbs). Using the Tabel Komposisi Pangan Indonesia (TKPI) dataset, we evaluated the performance of 12 diverse classifiers to predict binary classes ("low" or "high") for 13 target micronutrients. Random forest emerged as the best performing classifier with an average accuracy of 0.7421 across all target nutrients. Additionally, we introduced feature engineering techniques by incorporating polynomial and ratio features to enhance model performance. Minimum redundancy maximum relevance (mRMR) feature selection was then applied to identify the most informative features. This approach boosted the average accuracy of the random forest classifier to 0.7591. These findings highlight the efficacy of feature engineering and selection in enhancing nutrient prediction models, demonstrating the potential to improve consumer knowledge about unknown nutrients in food.
Gender Classification of Twitter Users Using Convolutional Neural Network Fitra Ahya Mubarok; Mohammad Reza Faisal; Dwi Kartini; Dodon Turianto Nugrahadi; Triando Hamonangan Saragih
MATRIK : Jurnal Manajemen, Teknik Informatika dan Rekayasa Komputer Vol. 23 No. 1 (2023)
Publisher : Universitas Bumigora

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.30812/matrik.v23i1.3318

Abstract

Social media has become a place for social media analysts to obtain data to gain deeper insights and understanding of user behavior, trends, public opinion, and patterns associated with social media usage. Twitter is one of the most popular social media platforms where users can share messages or ”tweets” in a short text format. However, on Twitter, user information such as gender is not shown, but without realizing it or not, there is information about it in an unstructured manner. In social media analytics, gender is one of the important data that someone likes, so this research was conducted to determine the best accuracy for gender classification. The purpose of this study was to determine whether using combined data can improve the accuracy of gender classification using data from Twitter, tweets, and descriptions. The method used was word vector representation using word2vec and the application of a 2D Convolutional Neural Network (CNN) model. Word2vec was used to generate word vector representations that take into account the context and meaning of words in the text. The 2D CNN model extracted features from the word vector representation and performed gender classification. The research aimed to compare tweet data, descriptions, and a combination of tweets and descriptions to find the most accurate. The result of this study was that combined data between tweets and
Co-Authors A.A. Ketut Agung Cahyawan W Abdullayev, Vugar Adam Mukharil Bachtiar Adawiyah, Laila Adin Nofiyanto, Adin Ahdyani, Annisa Salsabila Ahmad Balya Al Erpat Ahmad Rusadi Arrahimi - Universitas Lambung Mangkurat) Ahmad Rusadi Arrahimi - Universitas Lambung Mangkurat) Aida, Nor Ajwa Helisa Al Habesyah, Noor Zalekha Andi Farmadi Andi Farmadi Anshari, Muhammad Ridha Ansyari, Muhammad Ridho Antoh, Soterio Arfan Eko Ari Widodo Aryastuti, Nurul Azizah, Siti Roziana Badali, Rahmat Amin Budiman, Irwan Daduk Merdika Mansur Dalimunthe, Gallang Perdhana Deni Kurnia Diana Sari Dike Bayu Magfira, Dike Bayu Dina Arifah Dita Amara Dodon Turianto Nugrahadi Dzira Naufia Jawza Elvina Nur Hana Faisal, Mohammad Reza Faisal, Mohammad Reza Fatma Indriani Fatma Indriani Fitra Ahya Mubarok Friska Abadi Hafiz Ilhami Helma Herlinda Ihsan, Muhammad Khairi Indriani, Fatma Irwan Budiman Irwan Budiman Irwan Budiman Irwan Budiman Irwan Budiman Itqan Mazdadi, Muhammad Jhondy Baharsyah Jumadi Mabe Parenreng Kenji Satou Lestari, Mega Lilies Handayani Lumbanraja, Favorisen R Mafazy, Muhammad Meftah Mahmud Mahmud Maya Yusida Mera Kartika Delimayanti Miftakhul Huda Muhammad Fattah Edric Camilo Muhammad Fauzan Nafiz Muhammad Itqan Mazdadi Muhammad Reza Faisal, Muhammad Reza Muhammad Syahriani Noor Basya Basya Muliadi Muliadi Muliadi Muliadi . Muliadi . Muliadi Muliadi Muliadi Muliadi Muliadi Muliadi Muliadi Muliadi Muliadi, M Muliadi, Muliadi Musyaffa, Muhammad Hafizh Nor Indrani Nurcahyati, Ica Nurdiansyah Nurdiansyah Nurul Chamidah P., Chandrasekaran Padhilah, Muhammad Pirjatullah Pirjatullah Puput Dani Prasetyo Adi Radityo Adi Nugroho Radityo Adi Nugroho Rahmat Hidayat Rahmat Ramadhani Reina Alya Rahma Riadi, Putri Agustina Rizian, Rizailo Akfa Rizky, Muhammad Hevny Rozaq, Hasri Akbar Awal Rudy Herteno Rudy Herteno Rusdiani, Husna Said, Muhammad Al Ichsan Nur Rizqi Salsha Farahdiba Saragih, Triando Hamonangan Sari, Fitri Eka Septyan Eka Prastya Setyo Wahyu Saputro Shalehah Siena, Laifansan Siti Aisyah Solechah Siti Fathmah Sulastri Norindah Sari Sule, Ernie Tisnawati Tri Mulyani Triando Hamonangan Saragih Umar Ali Ahmad Vina Maulida, Vina Wahyu Caesarendra Wijaya Kusuma, Arizha Yasmin Dwi Safitri Yevis Marty Oesman YILDIZ, Oktay Yuyus Suryana