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Biodiversitas Journal of Biological Diversity
Published by Universitas Sebelas Maret
ISSN : 1412033X     EISSN : 20854722     DOI : https://doi.org/10.13057/biodiv/d230231
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology
The Biodiversitas Journal was first published in 2000 by the Department of Biology, FMNS, Universitas Sebelas Maret, Surakarta, Indonesia, then in 2006 it was co-published by the Society for Indonesian Biodiversity and that department; since 2017 it was also hosted by Smujo. From 2003-2012 it was accredited by DGHE, Ministry of Education, R.I., since 2014 was indexed by Scopus, where DOAJ and Google Scholar was indexed first.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia, Genetika dan Biologi Molekuler (Lain-Lain)
Articles 6,269 Documents
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Impact of the green revolution on the gender’s role in wet rice farming: A case study in Karangwangi Village, Cianjur District, West Java, Indonesia RUHYAT PARTASASMITA; BUDIAWATI S. ISKANDAR; SITI NURAENI; JOHAN ISKANDAR
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200104

Abstract

Partasasmita R, Iskandar BS, Nuraeni S, Iskandar J. 2019. Impact of the green revolution on the gender’s role in wet rice farming: A case study in Karangwangi Village, Cianjur District, West Java, Indonesia. Biodiversitas 20: 23-36. The wet rice farming (sawah) is very complex that is determined by ecological and social economic and cultural factors, including soil conditions, water availability, weather and climate, population, local knowledge, beliefs, technology, and economy. In addition, wet rice farming is determined by the government policy and market economy. In the past, the Sundanese rural people of West Java practiced the wet rice farming based on the local knowledge or traditional ecological knowledge which is strongly embedded with local tradition, and division of labor based on the gender. Traditionally, most inputs of the wet rice farming, including rice seeds, organic fertilizer, and biopesticides were provided by internal resources of rural ecosystem. Both male and female farmers intensively involved in various t wet rice farming activities based on the gender which is embedded by local tradition. For example, female farmers involved work in various activities that do not need energy but need to be careful and diligent, including the selection of rice seeds. Conversely, some works, including hoeing and plowing, were undertaken by male farmers. In the late 1960s, the Indonesian government modernized the wet rice farming through the Green Revolution program. Consequently, most rural farmers of West Java adopted this program. This research aimed to elucidate the impact of the Green Revolution program on the wet rice farming activities of Karangwangi village, Cianjur, West Java based on the gender issue. Aqualitative method with an ethnoecological approach was used in this study, while some techniques including observation, participant observation, and semi-structured interview were applied in this research. Thestudy result shows that in the past the wet rice cultivation of Karangwangi was traditionally carried out based on the local knowledge and embedded with local cultures, including traditional beliefs. Various activities of each stage of the wet rice farming were undertaken by male and female farmers based on gender and strongly embed by local tradition. By introduction of the Green Revolution, the female farmers have still involved in various activities of the wet rice farming. However, some female activities, including observation of star in the sky, rice seed selection, and ponding of rice grains of post-harvesting have been lost due to the introduction of the Green Revolution.
Taxonomy confirmation of Puntius cf. binotatus from Gunung Tujuh Lake, Jambi, Indonesia based on Cytochrome Oxidase-I (COI) gene DEWI IMELDA ROESMA; DJONG HON TJONG; WILA KARLINA; DYTA RABBANI AIDIL
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200107

Abstract

Roesma D. I, Tjong D. H, Karlina W, Aidil D. R. 2019. Taxonomy confirmation of Puntius cf. binotatus from Gunung Tujuh Lake based on Cytochrome Oxidase-I (COI) gene. Biodiversitas 20: 54-60. The population of Puntius cf. binotatus Gunung Tujuh Lake in considered as an isolated population which found in the 20-30 meters depth under the water Gunung Tujuh Lake, Sumatra Island. The species often exhibit different phenotypic characters and may genetic characters may also different due to their response to habitat/ecological conditions. Previous study on P. binotatus from several locations in West Sumatra showed the complexity of the genetic and morphological characters. A molecular study using COI gene of P. cf. binotatus from Gunung Tujuh Lake in Sumatera has been conducted to determine the taxonomic status of the fish. The distinct morphological characters of Puntius cf. binotatus is one black spot in the middle of the caudal and the absent of black spot on the base of the anterior dorsal ray. The analysis on COI gene showed that the range of sequence divergences between P. cf. binotatus Gunung Tujuh Lake and other Sumatra P. cf. binotatus is 3.1-7.6% and 4.1% to Barbodes banksi. This value represents the differences at the subspecies level of Barbodes banksi. Therefore Barbodes banksi gunungtujuh is proposed as an appropriate name to P. cf. binotatus Gunung Tujuh Lake.
Spatio-temporal distribution of microalgae producing chlorophyll and carotenoid pigments in Bali Strait, Indonesia ANNA FAUZIAH; DIETRIECH G BENGEN; MUJIZAT KAWAROE; HEFNI EFFENDI; MAJARIANA KRISANTI
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200108

Abstract

Fauziah A, Bengen DG, Kawaroe M, Effendi H, Krisanti M. 2019. Spatio-temporal distribution of microalgae producing chlorophyll and carotenoid pigments in Bali Strait, Indonesia. Biodiversitas 20: 61-67. The Bali Strait waters become a place for various development activities that connect Java Island and Bali Island so that it is thought to have an impact in the life of microalgae that play an important role in the wealth of their water resources. This study aims to explore the spatiotemporal distribution of marine microalgae, which has the potential to produce chlorophyll and carotenoid pigments, as well as their relationship with the environmental characteristics of the Bali Strait waters. The research was conducted at the 5 stations in the morning, midday and afternoon. The data obtained were analyzed using Principal component analysis (PCA) and Correspondence analysis (CA). The results showed that chlorophyll-a, chlorophyll-b and carotenoid were mostly contained by the species Chaetoceros gracilis, Tripos lunula at station 5 (Pang-pang Bay) in the morning, midday and afternoon, and contained by the species Fragilariopsis cylindrus, Thalassiothrix fravenfeldii at station 3 (Ketapang-Gilimanuk ferriage) in the midday and afternoon. Spatially, salinity, ammonia, nitrate, and chlorophyll-a have significantly different values between stations, while temporally the content of chlorophyll-b and carotenoid are influenced by time (in the morning, midday and afternoon).
Typology of native species as the shade tree for merbau (Intsia bijuga) plantations in Papua, Indonesia based on ecological species group ELIESER VIKTOR SIRAMI; DJOKO MARSONO; RONGGO SADONO; MUHAMMAD ALI IMRON
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200106

Abstract

Sirami EV, Marsono Dj, Sadono R, Imron MA. 2019. Typology of native species as the shade tree for merbau (Intsia bijuga) plantations in Papua, Indonesia based on ecological species group. Biodiversitas 20: 43-53. Ecological species group is an ecological principle that can be used as a reference in determining the potential native tree species of Papua as the shade trees for merbau in the mixed forest plantations. This research was conducted to identify the potential native trees as the shade for merbau plantation in Papua. The data collection used systematic line technique with hypothetical plot and sampling tree as the plot center. The Dice Index was used to analyze the level of association between merbau and the neighboring trees as well as to serve as a basis for determining ESG and Important Value Index was used to analyze the level of tree dominance. The main potential shade trees consisting of Pometia coriacea Radlk., Lepiniopsis ternatensi Valeton, Spathiostemon javensis Blume, Palaquium amboinense Burck., and Pimelodendron amboinicum Hassk. Whereas complementary and alternative potential shade consisting of Haplolobus lanceolatus H.J.Lam ex Leenh, Haplolobus celebicus H.J.Lam, Horsfieldia laevigata Warb., Horsfieldia irya (Gaertn.)Warb. Prunus costata Kalkman, Sterculia macrophylla Vent., Dysoxylum mollissimum Blume, Pertusadina multifolia (Havil.) Ridsdale, Streblus elongatus (Miq.) Corner and Geijera salicifolia Schott. The main shade trees possessed a main function for rendering shade toward younger merbau in the plantation area. Meanwhile, complementary and alternative shade trees were intended for increasing soil nutrient availability and optimizing microclimate surround merbau seedlings.
Conflict between human and wild Sumatran Elephant (Elephas maximus sumatranus Temminck, 1847) in Aceh Province, Indonesia INDIRA NURUL QOMARIAH; TUTIA RAHMI; ZURAIDAH SAID; ARIEF WIJAYA
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200110

Abstract

Qomariah IN, Rahmi T, Said Z, Wijaya A. 2019. Conflict between human and wild Sumatran Elephant (Elephas maximus sumatranus Temminck, 1847) in Aceh Province, Indonesia. Biodiversitas 20: 77-84. Aceh Province has the largest habitat for Sumatran elephant. However, the elephant population in the province keeps decreasing due to frequent conflict with humans. This study aimed to observe the trend and pattern of Human-elephant Conflict (HEC) in Aceh, as well as the main causes driving the conflict. To collect information, we carried out desk study, secondary data collection, and interviews with relevant actors in Aceh Jaya, Pidie, and Aceh Timur District. We collected data of HEC during the 2012-2017 period in 16 districts across Aceh. The result shows that during the six years, there were 262 HEC cases occurred in Aceh, where Aceh Timur and Aceh Jaya contributed the highest number of HEC incidence, with 47 and 44 cases respectively. Maximum Entropy analysis shows that the main factor causing the conflict is “Distance from the human settlement” with 84.7% contribution, followed by “Primary forest loss” (14.1% contribution). From the findings, we suggest reforestation in areas that becomes elephant home range and creation of barriers within the conservation forest boundaries. Moreover, HEC mitigation action should also be incorporated in provincial spatial planning (Rencana Tata Ruang Wilayah - Provinsi) to minimize further economic loss and wildlife extinction.
Expression of oil palm (Elaeis guineensis) polyisoprenoids in response to Ganoderma boninense infection DADANG AFANDI; MOHAMMAD BASYUNI; LOLLIE AGUSTINA P. PUTRI; DIANA CHALIL; INDRA SYAHPUTRA
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200109

Abstract

Afandi D, Basyuni M, Putri LAP, Chalil D, Syahputra I. 2019. Expression of oil palm (Elaeis guineensis) polyisoprenoids in response to Ganoderma boninense infection. Biodiversitas 20: 68-76. Currently, oil palm is an important economic crop and has become one of the world's major vegetable oils as well as a potential source of biodiesel. Unfortunately, oil palm plantations in Asia, particularly in Indonesia and Malaysia face the threat of basal stem root diseases caused by Ganoderma sp. Various methods and approaches have been made to select the oil palm that is tolerant to Ganoderma boninense, among others using biochemical selection. This research aimed to analyze polyisoprenoids expressionof oil palm tolerant to G. boninense using two-dimensional thin layer chromatography (2D-TLC). The plant material used in this trial weretwo cross-series of genetic materials belonging to PT Socfindo, that were known to have certain levelsof tolerance to G. boninense. The first wasa cross-series of 15-year-old oil palm in the field, and the secondwasa new cross-series for an early detection in the nursery stage. The results showed that there werediversitiesin the expression of polyisoprenoids between tissues, treatments, and level of tolerance. Polyprenols with a chain length of C45-C65 and dolichols of C45-C55were detected in the leaf tissue but not found in the root tissue. Polyprenols with a carbon chain length of C80-C100 occurred in infected palm root tissue but did not in the healthy oil palm. The increase of polyisoprenoid (polyprenol and dolichol) in infected and inoculated root tissues it is presumablydue to the plant biochemical response to the presence of G. boninense attack. Cluster analysis demonstrated distinct groups of polyisoprenoid carbon-chains betweenroot and leaf tissues of oil palm mature and seedling. Interestingly, in the absence of G. boninense infection, the polyisoprenoid carbon chain pattern in the tolerant oil palm seedlingroot tissue is different from that in the susceptible seedlings. Thus, the polyisoprenoid carbon chain pattern can be considered as a potential biochemical marker for the screening of oil palm tolerance to G. boninense.
Bamboo diversity of Sulawesi, Indonesia DITA ERVIANTI; ELIZABETH A. WIDJAJA; AGUNG SEDAYU
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200112

Abstract

Ervianti D, Widjaja EA, Sedayu A. 2019. Bamboo diversity of Sulawesi, Indonesia. Biodiversitas 20: 91-109. Bamboo is one of the important plants in the world. Beside their economic important, bamboo also plays an important role in the environment for climate change. The purpose of this study was to inventory the bamboo diversity in Sulawesi. The methodology used in this study is by observing herbarium specimens kept in the Herbarium Bogoriense (BO) and field experience by the second author (EAW). The result showed that there are 39 species of 12 genera in Sulawesi, i.e. Bambusa blumeana, B. glaucophylla, B. maculata, B. multiplex, B. tuldoides, B. vulgaris, Chloothamnus sp., Dendrocalamus asper, Dinochloa albociliata, D. aopaensis, D. barbata D. cordata, D. erecta, D. hirsuta, D. morowaliensis, D. petasiensis, D. pubiramea , D. truncata, Dinochloa sp.1, Dinochloa sp.2, Dinochloa sp.3, Dinochloa sp.4, Dinochloa sp.5, Dinochloa sp.6, Dinochloa sp.7, Dinochloa sp.8, Dinochloa sp.9, Fimbribambusa sp., Gigantochloa apus, G. atroviolacea, G. atter, Neololeba atra, Phyllostachys aurea, Racemobambos celebica, Schizostachyum brachycladum, S. latifolium, S. lima, Sphaerobambos subtilis, and Thyrsostachys siamensis. Identification keys and descriptions are presented. This data reported will be used as basic information for bamboo conservation and bamboo industry.
Characteristics and causes of forest and land fires in Kapuas District, Central Kalimantan Province, Indonesia ACHMAD SIDDIK THOHA; BAMBANG HERO SAHARJO; RIZALDI BOER; MUHAMMAD ARDIANSYAH
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200113

Abstract

Thoha AS, Saharjo BH, Boer R, Ardiansyah M. 2019. Characteristics and causes of forest and land fires in Kapuas District, Central Kalimantan Province, Indonesia. Biodiversitas 20: 110-117. Forest and land fire occurs almost every year in Indonesia. Its impact is very harmful for human and environment. Developing a program in fire management requires identification of forest and land fire characteristics and its causes. The aim of this research was to evaluate the characteristics and causes of forest and land fire in Kapuas District Central Kalimantan Province. Spatial analysis of hotspots with rainfall was used to determine temporal distribution of fire. Spatial distribution between hotspot and causative factors was determined to identify spatial characteristics of fires. Increasing number of hotspots occurs when monthly rainfall decreases. Most high fire activities are located in peatland, swamp shrubs, close to road, close to river and far away from villages. Fire causes from human activities mostly originated from swamp shrub burning and land clearing for farming. Hotspot density has various relationship with peat depth, land cover, accessibility, and human activities.
Short Communication: Age and growth of elongated mudskipper, Pseudapocryptes elongatus (Cuvier, 1816) from Sundarbans, India GOPALAN MAHADEVAN; PALANIVEL BHARATHIRAJAN; VELAYUTHAM RAVI; MOJTABA POULADI; MARYAM MIRZAEI VAND KHANGHAH
Biodiversitas Journal of Biological Diversity Vol. 20 No. 1 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200111

Abstract

Mahadevan G, Bharathirajan P, Ravi V, Pouladi M, Mirzaei Vand Khanghah M. 2019. Short Communication: Age and growth of elongated mudskipper, Pseudapocryptes elongatus (Cuvier, 1816) from Sundarbans, India. Biodiversitas 20: 85-90. The estimation of age and mathematical expression of fish growth is complex and debated subject in fishery sciences. Growth parameters of elongated mudskipper, Pseudapocryptes elongatus were estimated based on the length frequency data using FiSAT II software (several tools such as Powell-Wetherall method, ELEFAN and von Bertalanffy growth estimates). Samples were collected from Sundarbans mangroves using gill and cast nets and by hand picking. The length-frequency (LFQ) of P.elongatus was recorded from January 2014 to December 2015 and the above tools estimated the growth parameters (L?, K and t0) from the progression of LFQ modes through time. L? and K values of males were 220.50 mm and 1.3 yr-1, respectively and similarly, L? and K values of females were 221.05 mm and 1.21 yr-1, respectively. The t0 values estimated for males and females were-0.1915 years and-0.1661 years, respectively. The estimated growth performance index (?) values for males and females of P. elongatus were 4.394 and 4.503, respectively. The lifespan of both the sexes was found to be 4+ years.
Diversity and inheritance in cowpea (Vigna unguiculata) on protein and yield components characters: diversity and inheritance in cowpea (Vigna unguicullata (L.) Walp) on protein and yield components characters INDAH PURNAMASARI; SOBIR SOBIR; MUHAMAD SYUKUR
Biodiversitas Journal of Biological Diversity Vol. 20 No. 5 (2019)
Publisher : Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.13057/biodiv/d200507

Abstract

Abstract. Purnamasari I, Sobir, Syukur M. 2019. Diversity and inheritance in cowpea (Vigna unguiculata) on protein and yield components characters. Biodiversitas 20: 1294-1298.  Diallel was a method that can be used to see inheritance and diversity character of plants. The objective of this study has evaluated the inheritance and diversity of the yield component characters and seed protein content. This study used genetic material from five homozygous cowpeas (Vigna unguiculata (L.) Walp) genotypes (KM1, KM2, KM4, KM5, and TG2) and 20 F1. Genotypes were planted using a randomized complete block design with three replications. The character observed were the yield components (weight of 100 seed, number of seeds per pod, number of pods per bunch, number of pods per plant and yield) and seeds protein content. Characters that were influenced by general combining ability (GCA) consist of weight of 100 seeds, number of pods per bunch, number of seeds per pod and seed protein content. The variance of GCA has a greater value than the variance of specific combining ability (SCA). Narrow sense and broad sense heritability values were high category consist of weight 100 seed, number seeds per pod, number pods per bunch and seed protein content. That characters were inherited additively. Characters were influenced by additive gene action and have high diversity make it possible to select in F2 generation using the pedigree selection method. 

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