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Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences

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Published by Universitas Brawijaya

ISSN : 20875517 EISSN : 25274376 DOI : -

Core Subject : Agriculture, Social,

Agriculture, Biological Sciences & Forestry Environmental Science

The Journal of Tropical Life Science (JTLS) provides publication of full-length papers, short communication and review articles describing of new finding or theory in living system, cells and molecular level in tropical life science and related areas. The journal publishes articles that report novel findings of wide Tropical Life system phenomenon in the areas of biodiversity, agriculture, fisheries, health, husbandry, forestry and environmental technology. JTLS has 1 volume with 3 issues per year.

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Articles 966 Documents

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Red Yeast Rice Protects Hepatocytes conditions of Rats Receiving High Fat Diet Wahyuningsih, Doti; Elyani, Helmin; Damayanti, Dini Sri; Yahya, Arif; Fadli, Muhammad Zainal
Journal of Tropical Life Science Vol 9, No 2 (2019)
Publisher : Journal of Tropical Life Science

Triglyceride (TG) is a simple and the main lipid of the daily diet. Nowadays, TG is emerging as an independent risk factor for cardiovascular disease, and increasing clinical data that indicate a high level of this simple lipid in serum may alert and play a role in liver impairment. Red yeast rice (RYR) reduces serum TG in human and animals. The rice is widely used as a natural inhibitor of HMG-CoA reductase to correct serum cholesterol level. Bioactive components of the rice are well known to have antioxidant properties. This study examined whether RYR protects hepatocytes by evaluating the serum AST-ALT, HDL-Cholesterol (HDL-C), TG levels, and the number of liver foam cells in hypertriglyceridemic rats. Twenty male Wistar rats were grouped into 5. Four groups received a high-fat diet (HFD), 40 g/animal/day for 60 days to induce hypertriglyceridemic condition. Along with the HFD treatment, three groups received 108, 54, and 27 mg/kgBW/day of RYR, respectively. Two other groups received standard and only HFD diet, respectively. Intracardiac blood was collected for measuring AST and ALT using AST or ALT activity assay Kit, respectively, serum TG and HDL-C by Enzymatic Caloric Test.Â Hematoxylin-Eosinâ€“stained 4Âµmm thick slices of liver tissues were prepared to count foam cell number by a light microscope with 400x magnificence. Data were analyzed using the Kruskal Wallis continued by the Mann Whitney U test. The p values of < 0.05 were considered to be significant. The present study found that 108, 54, and 27 mg/kgBW/day of RYR significantly decreased serum TG, HDL-C, AST, and ALT compared with those of hypertriglyceridemic rats receiving no RYR. The decreasing levels of the parameters were in relation to the doses of RYR. The doses of 108 and 54 mg/kgBW/day resulted in complete recovery of the liver tissues suffered from steatosis (p < 0.05). The RYR dose of 108 mg/KgBW/day completely corrects the serum HDL-C level. In conclusion, red yeast rice may have a potency to protect hepatocytes injuries due to hypertriglyceridemia.

Fishermenâ€™s Perspective on Herpetofauna: A Case Study from Kuala Tungkal, Tanjung Jabung Barat, Jambi Kurniawan, Nia; Firdaus, Anggun Sausan; Nugraha, Fitra Arya Dwi; Maulidi, Andri; Kurnianto, Aguung Sih
Journal of Tropical Life Science Vol 8, No 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.01

The population of herpetofauna (Class: Reptilia, Amphibia) is continuously declining throughout the world. Moreover, habitat changes such deforestation drive rapidly to declining process. Human communities play an important role in conserving the herpetofauna by maintaining and improving the harmonious relationship between human and environment. Therefore, these association will strongly support the conservation of herpetofauna and their habitats. This study is aimed to survey the herpetofauna communities, explore the local people perspective on herpetofauna, and the relationship between human and herpetofauna. We found 12 species observed in this survey that included to 3 order of herpetofauna: anura, squamata and testudines. Local people recognized herpetofauna species around them well and do not harm them because of their roles, such as part of nature (39%), bioindicator (33%), myth (17%), and economic value (11%). We also revealed the local knowledge on herpetofauna, as 14 local names and their roles. Despite Kuala Tungkal is a strategic area for the national port development that probably impacts herpetofauna microhabitat, it needs serious attention on herpetofaunal issues.

New Host Record of Lutjanus gibbus for Parasitic Nerocila sp. (Crustacea, Isopo-da, Cymothoidae) from South Andaman, Andaman Islands, India Anil, Pathan; Sayeri, Paul; Jayaraj, Kadeparambil Arjunan
Journal of Tropical Life Science Vol 9, No 3 (2019)
Publisher : Journal of Tropical Life Science

A new host of Cymothoid isopod, Nerocila sp. was identified from the dorsal surface of the body (caudal peduncle) of Lutjanidae fish Lutjanus gibbus (Forsskal, 1775) which is a new host record of isopod parasite Nerocila sp. from the coastal waters of South Andaman, Andaman Islands. This study revealed the first occurrence of this parasitic isopod (Nerocila sp.) from Andaman and Nicobar Islands. A comprehensive summary of the nominal Nerocila species recorded on different host species is provided. The present finding adds another species of isopod to the checklist of Andaman and Nicobar Islands.

Levels of 25(OH)D3, IL-2, and C-peptide in Children with Type 1 Diabetes Mellitus (T1DM) Receiving Vitamin D3 Supplementation Suryanto, Tjahyo; Tjahjono, Harjoedi Adji; Widjajanto, Edi
Journal of Tropical Life Science Vol 8, No 1 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.01.06

Type 1 Diabetes Mellitus (T1DM) has become a health problem in many countries. T1DM is the consequence of autoimmune destruction process of Î² cells. There was relationship between vitamin D deficiency with T1DM. The destruction process was caused by an imbalance of pro-inflammatory and anti-inflammatory cytokines. One of the pro-inflammatory cytokines is IL-2. C-peptide examination to see the function of beta cells due to destruction of pancreatic beta cell. Administration of vitamin D3 supplementation still cause controversy and give varying results. This randomized clinical trial was conducted to determine the levels of 25(OH)D3, IL-2, and C-peptide in people with T1DM who received vitamin D3 supplementation. The subjects were 26 children with T1DM, divided into K1 group (received vitamin D3 supplementation) and K2 group (received placebo). The results showed higher levels of 25(OH)D3 in the K1 group and statistically found a significant difference (p = 0.00). Higher levels of IL-2 and lower C-peptide were obtained in the K1 group and no statistically significant differences were found (p = 0.76 and p= 0.26). The insignificant relationship and the negative correlation were found between 25(OH)D3 and IL-2 (p = 0.71; r = - 0.12), 25(OH)D3 and C-peptide (p = 0.59; r = -0.16), also levels of IL-2 and C-peptide (p = 0.13; r = -0.44) in children with type 1 diabetes who received vitamin D3 supplementation. From this study can be concluded that administration vitamin D3 supplementation in patients with T1DM can increase levels 25(OH)D3 significantly. This increase has not significantly lowered levels of IL-2 and increased levels of C-peptide. However, there was an absolute decrease in the rate of slower C-peptide in the supplemented group than in the placebo group.

The DNA Sequence Encoding Actin (ACT1) of Pandan (Benstonea sp.) Roslim, Dewi Indriyani; Herman, Herman
Journal of Tropical Life Science Vol 9, No 3 (2019)
Publisher : Journal of Tropical Life Science

One of housekeeping genes is actin gene. This gene is frequently used in gene expression studies as an internal control. The DNA sequence encoding actin from Pandan (Benstonea sp.) clone Riau has not been reported, therefore, this study investigated the DNA sequence encoding actin isolated from Benstonea sp. clone Riau. Total DNA isolation was performed in fresh leaves, total RNA isolation from stem, total cDNA synthesis, polymerase chain reaction using degenerate actin primer, electrophoresis, cloning, transformation, blue white colony selection, colony PCR, sequencing, data analysis using BioEdit and MEGA6 softwares and BLASTn program. The partial DNA sequence encoding actin from Benstonea sp. clone Riau obtained was 1,403 bp. The sequence was grouped as part of actin1 (ACT1) and it was consisted of two exons and one intron. The predicted coding and peptide sequences were 616 bp and 205 amino acids, respectively.Â The predicted coding sequence had 90% similarity to some ACT1 mRNA from some plants species but none of which belongs to Benstonea genus or Pandanaceae family. The deduced peptide sequence had similarity to some ACT1 peptide from some plant species of up to 99% and also none of them belongs to Benstonea genus or Pandanaceae family. Thus, the partial ACT1 gene obtained in this study was the first sequence reported from Benstonea genus. Furthermore, this sequence can be used as a reference to isolate actin genes from other species within Benstonea genus for gene expression analysis purposes.

Tetracera scandens as a Medicinal Plant: Secretory Structures, Histochemistry, and Antibacterial Activity Muliyah, Evi; Sulistijorini, Sulistijorini; Sulistyaningsih, Yohana Cecilia; Rafi, Mohamad
Journal of Tropical Life Science Vol 8, No 1 (2018)
Publisher : Journal of Tropical Life Science

Tetrascera scandens, a member of Dilleniaceae, is used for traditional medicine; the stem is utilized by the Anak Dalam tribe of Jambi Province, Sumatera island, Indonesia, to treat diarrhea symptoms. The aims of this study were to identify the secretory structures, histochemical aspects, and the antibacterial potency of T. scandens stem. Histological study of the secretory structures of T. scandens stem was carried out. The species has idioblast cells and trichomes as its secretory structures. Histochemical analysis indicated the substance secreted by T. scandens idioblast cells mainly contains alkaloids, terpenoids, and phenols. Trichomes of T. scandens only contain flavonoids. The antibacterial activity of methanol extracts was tested against Staphyllococcus aureus and Escherichia coli. Different concentration of extracts was tested using the well diffusion method. According to the results, 100 mg/mL T. scandens extract showed the best inhibitory activity with a maximum inhibition zone of 17.7 mm against S. aureus and of 12.5 mm against E. coli. This study provides scientiï¬c evidence that the stem of T. scandens has antibacterial activity and justiï¬es its use by the local community.

Analysis of Technical Efficiency of Small-Scale Rice Farmers in Indonesia Wardana, Fitri; Yamamoto, Naoyuki; Kano, Hideyuki
Journal of Tropical Life Science Vol 8, No 2 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.02.01

In this study, we analyzed the performance of small-scale rice farmers who used hand tractors in Jember Regency, Indonesia. Data were collected from 144 small-scale rice farmers in six districts through the use of a questionnaire in September 2015. The Data Envelopment AnalysisSlack-Based Model (DEA-SBM) was used to calculate the technical efficiency of small-scale rice farmers based on seven inputs and one output by determining Overall Technical Efficiency (OTE), Pure Technical Efficiency (PTE), and Scale Efficiency (SE). The results showed that out of 144 small-scale rice farmers, only nine farmers and 14 farmers were evaluated as strongly efficient and weakly efficient, respectively, while the rest were categorized as inefficient. The average values for OTE, PTE, and SE were 0.41, 0.63, and 0.61, respectively. The observed inefficiency was because of both poor input utilization (managerial inefficiency) and failure to operate at an optimal scale (scale inefficiency). Such analysis of technical efficiency can encourage small-scale rice farmers to enhance their performance and profitability.

The Plant Wisdom of Dayak Ot Danum, Central Kalimantan Herianto, Herianto; Kusuma, Zaenal; Nihayati, Ellis; Prayogo, Cahyo
Journal of Tropical Life Science Vol 8, No 2 (2018)
Publisher : Journal of Tropical Life Science

This research aims to describe plants diversity having local wisdom value for Ot-Danum Dayak people, Tumbang Payang village and Tumbang Kania village, Central Kalimantan. The result reveals that since a long time ago, Ot-Danum Dayak people truly depend on natural resources to meet various daily needs. The vast majority of subsistence and society's income are form forest plants product. Plant diversity can provide food product for society, can produce various plants to be consumed and also produce alternative income sources, such as exploited for food, medicine, fermentation, tonic, cosmetic, building material and etc. However, the existing plant diversity is endangered since deforestation and forest degradation, and even there are many lesser-known species. Therefore, it needs to quickly find the information about the species to conservation effort, given the existing forest resource has a big potential to be developed and cultured to the species through domestication and providing a genetic resource for hybridization and selection.

Sensitivity and Specificity of Nested PCR for Diagnosing Malaria: Cases in Several Areas of Indonesia Arifin, Samsul; Fitri, Loeki Enggar; Sujuti, Hidayat; Hermansyah, Bagus; Endharti, Agustina Tri; Burhan, Niniek; Candradikusuma, Didi; Sulistyaningsih, Erma; Tuda, Josef Sem Berth; Zein, Umar
Journal of Tropical Life Science Vol 8, No 2 (2018)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.08.02.11

Indonesia is still included in high endemic area of malaria infection. Early detection as well as appropriate and quick treatment is needed to be able to prevent and treat malaria in Indonesia. Laboratory examination using a microscopic method is still used as the gold standard to diagnose malaria cases. However, the morphology similarity of some Plasmodium species and the number of parasites that can be seen under microscopy causes malaria diagnosis become difficult if only relying on microscopy diagnostic method. The purpose of this study is to analyze the sensitivity and specificity of nested PCR compared to microscopic examination in diagnosing malaria cases. A cross-sectional study has been carried out in some areas of Indonesia and the microscopic analysis as well as nest PCR was done in Laboratory of Parasitology and Laboratory of Central Biomedical Faculty of Medicine, Universitas Brawijaya, Malang East Java Indonesia. A total of 149 blood samples from patients with clinical symptoms of malaria had been obtained from Sumatra, Sulawesi and East Java during December 2011 to December 2013. From 149 sample, 81.9% samples were diagnosed malaria positive by microscopy examination, whereas the PCR results showed that 90.6% of samples were positive. Nested PCR sensitivity is 97.5%, and microscopy 88.2%. Nested PCR specificity is 40.7%, whereas microscopy 78.5%. PPV and NPV for nested PCR are 88,2% and 78.5% respectively, and for microscopy are 97.5% and 40.7% respectively. Nested PCR has a higher sensitivity than microscopy in diagnosing malaria and is able to detect mixed infection better than microscopic examination. However, it is statistically less specific than microscopy examination.

Distribution and Attachment of Bryozoans in the Intertidal Region of South Andaman Island Naufal, Mohammed; Pathan, Anil; Jayaraj, Kaderambil Arjunan
Journal of Tropical Life Science Vol 8, No 3 (2018)
Publisher : Journal of Tropical Life Science

Aiming to collate the distribution and the attachment preference of intertidal bryozoan of Andaman waters, a study was carried out in three intertidal sites (Burmanallah, Kodiyaghat, and Chidiytapu) of southeastern coasts of the Andaman Islands between June and August 2016. The present study is the first exclusive report on bryozoans from the Andaman Islands after a long research gap of nine decades. During our investigation, a total of twelve genera were identified from both calcareous and non-calcareous substratum. Out of the twelve genera, eight genera were new records from the island. The present study showed that the attachment affinity of the Bryozoans is more towards natural substratum particularly on the rocks. The Thalamoporella sp. reported the most abundant species with maximum average colony length of 3.5 cm from the rock substratum.

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