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INDONESIA
HAYATI Journal of Biosciences
Published by Institut Pertanian Bogor
ISSN : 19783019     EISSN : 20864094     DOI : -
Core Subject : Science, Agriculture,
Agriculture, Biological Sciences & Forestry Earth & Planetary Sciences
HAYATI Journal of Biosciences (HAYATI J Biosci) publishes articles and short communication in tropical bioscience fields such as development, biotechnology, biodiversity and environmental issues. HAYATI J Biosci covers wide range of all life forms topics including virus, microbes, fungi, plants, animal and human. HAYATI J Biosci has been also indexed/registered in Crossref, DOAJ, CABI, EBSCO, Agricola and ProQuest.
Arjuna Subject : -
Articles 1,091 Documents
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The Benthic Foraminiferal Assemblages in the Seagrass Bed of Tanjung Berakit Waters, Bintan Island Suhartati M. Natsir; Ira Dillenia
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1149-1154

Abstract

Seagrass is the most common ecosystem in Tanjung Berakit waters. Therefore, Tanjung Berakit waters have a very important role as a benthic foraminiferal habitat. This study was conducted to describe the distribution of benthic foraminifera relating to the environmental condition of the waters. The samples were collected from eight stations by handling garb in November 2017. This study collected 18 species of shallow water benthic foraminifera dominated by Amphistegina and Heterostegina. This study recorded a correlation between the sediment texture and foraminiferal assemblages. The most common foraminifera were inhabiting fine-textured sediments, especially very fine sand and silt. Only a few foraminifers are collected from extremely fine sediments such as clay sediments, or extremely coarse including pebbles.
Microbiome Structure Analysis of Oil Palm Pollinator Elaeidobius kamerunicus (Coleoptera; Curculionidae) Arina Amalia Putri; Maria Sugiharti; Alfred Michael; Anja Meryandini; Antonius Suwanto
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1155-1166

Abstract

The pollination of oil palm by Elaeidobius kamerunicus leads to an increase of over 70% in countries such as India, Malaysia, and Indonesia. The impact of insect-microbiome interactions on the pollination activity and fitness of E. kamerunicus is unknown. Our study aimed to gain insight into the bacterial communities of E. kamerunicus from two different sites with high and low fruit set percentages, using culturable and Terminal Restriction Fragment Length Polymorphism (T-RFLP) analysis. Our result revealed distinctive T-RFs profiles in E. kamerunicus from two different sites. Additionally, the culturable approach showed that some of this microbiome were found only in the weevil population from the high fruit set site. Our findings suggest that these bacteria could contribute to the fitness of E. kamerunicus, leading to a higher fruit set in oil palm plantations.
Bacteriocinogenic Lactic Acid Bacteria Isolated from Mangrove Sediment in Indonesia: Growth Optimization, Bacteriocin Production, and its Application in Food Preservation Dyah Fitri Kusharyati; Oedjijono; Taruna Dwi Satwika; Dwiana Muflihah Yulianti; Afifah Mariana; Anwar Rovik
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1121-1131

Abstract

The mangrove ecosystem is unique because it is located between marine and land. Little research is exploring lactic acid bacteria (LAB) from mangrove ecosystems. The LAB LG71 isolate is successfully isolated from the sediment of mangrove ecosystems on the coast of Logending, Jawa Tengah (Indonesia). In this study, we aimed to know the effect of glucose supplementation on the growth of LG71 isolate, bacteriocin production, and its application in food preservation. The characterization results showed that the LG71 isolate is Lactobacillus sp. Interestingly, the LG71 isolate is catalase-positive since this character is rarely found in the LAB group. Supplementing 0.25% glucose to MRSB medium and an incubation time of 15 hours is the best treatment for producing Lactobacillus LG71 isolate cell biomass. A 2% concentration of crude extract of Lactobacillus LG71 bacteriocins is the best concentration against Salmonella typhi both during in vitro and in vivo tests in fish balls. The addition of glucose affects the production of Lactobacillus LG71 cell biomass, and the bacteriocin derived from Lactobacillus LG71 gives increased protection against S. typhi and offers an alternative for food preservation.
An Introduction to Indonesian Wild Shiitake Ivan Permana Putra; Mada Triandala Sibero; Saipul Sihotang; Lilis Supratman; Rudy Hermawan; Oktan Dwi Nurhayat
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1132-1138

Abstract

Pegler suggested that shiitake comprises three morphological species: Lentinula edodes (continental and northeast Asia), L. lateritia (tropical Asia and Australasia), and L. novae-zelandiae (New Zealand). The current study reported for the first time the occurrence of L. lateritia (Berk.) Pegler in Indonesia. During a fungus foray in Kerinci (Jambi, Sumatra, Indonesia) in 2022 and 2023 by the Indonesian mushroom hunter community, some basidiomata of Lentinula were obtained. At a glance, our specimens resembled L. edodes. The current study aims to justify the taxonomical position of our specimens based on morphological and molecular data. The fresh basidiomata were used for morphological and molecular analyses. The molecular work was done using ITS 4/5 Primers for phylogenetic analysis of rDNA-ITS region. Morphologically, the uniformly reddish brown, smooth, and glabrous of pileus confirmed our specimens as L. lateritia. In addition, the absence of a range of colors and squamules pileus distinguished L. lateritia BO24628 form L. edodes, while the formation of florets cheilocystidia in L. madagasikarensis was the distinctive character of our specimens. The BLAST result revealed that our specimen has high similarity (99-100%) with L. lateritia and L. edodes as the top hits. The phylogenetic tree (RAxML) nested our specimens in the L. lateria clade and is closely related to one specimen from Papua New Guenia (PNG) (BS 98%). In addition, L. lateritia BO24628 has a sister clade of the specimen from PNG and Australia. Moreover, we provide the herbarium collection of wild L. lateritia in Indonesia.
Investigation of Morinda citrifolia Activity Related Collagen Type II Synthesis Through Gene Expression Unchaleeporn Ameamsri; Runglawan Sudmoon; Warin Wonok; Sanit Kaewdaungdee; Tawatchai Tanee; Arunrat Chaveerach
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1194-1200

Abstract

To extend plant benefits, three different concentrations of five Morinda citrifolia part was investigated on the collagen type II which is the primary collagen in human cartilage through the expression of the genes, COL2A1, COL-II and COLL2 regions in normal human dermal fibroblasts by qRT-PCR method. The results showed that 1) fibroblasts cultured in the presence of M. citrifolia extracts produced many times more collagen type II gene expression than control cells depending on the plant parts and concentrations, 2) the expression levels of the collagen type II gene stimulated by all fruit parts yields the higher percentages than leaves. Next, Morus alba leaf extract at a concentration expected to be a precursor protein source for collagen synthesis, working together with M. citrifolia stimulation, was added to the selected concentration indicating high expression in the M. citrifolia fruit experiments. The result showed various gene expression levels depended on the kind of gene and fruit part. Therefore, M. citrifolia fruits can benefit the creation of collagen type II with or without M. alba. The M. citrifolia fruit can be further benefited in product production for both the elderly and young for maintaining the typical structure and function of the skin, tendon, and bone.
Thermal Drone Technology Used to Capture Thermoregulation in Wild Sumatran Elephants Raden Danang Wijayanto; Aryo Adhi Condro; Dede Aulia Rahman
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1061-1070

Abstract

Drone technology plays a critical role in supporting conservation efforts for endangered species, not only in terms of species monitoring within various landscapes, but also potentially when applied to behavioral studies to investigate interaction patterns and response to environmental change. We tested a thermal drone to investigate thermoregulation and surface temperature of wild Sumatran elephants in the lowland tropical forest of Jambi, Indonesia. Thermoregulation data was obtained using RGB images and videos, while temperature values were measured from thermal images (R-JPEG) extracted into TIFF equipped with pixel temperature. We detected a visual thermoregulation mechanism known as mud bathing. Our study demonstrated that the trunk functions to draw mud and throw it onto the head, back, and stomach, the tail functions to distribute the mud to all parts of the back of the body, while the ears flapped to keep head temperature cool. Our measurements showed that the surface temperature of Sumatran elephants is between 28.9-30.3°C. The head had a relatively lower temperature than other body parts. This study also revealed that the environmental humidity variable significantly affects the elephant's temperature rise. The use of drone technology for future behavioral studies is recommended as it accurately provides high quality data and can be widely used in any type of terrain.
Formulation of Anti-Oral Mouthwash Nanoemulsion Biofilm Based on Propolis Extract Heterotrigona itama, Tetragonula sapiens, and Tetragonula clypearis Muhamad Sahlan; Alya Fadhila Ismail; Diah Kartika Pratami; Apriliana Cahya Khayrani
HAYATI Journal of Biosciences Vol. 30 No. 6 (2023): November 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.6.1175-1186

Abstract

The use of mouthwash is one of the actions against biofilms that are often used. However, commercial mouthwashes have a fairly high alcohol content, which is around 26.9% of the total volume, which is considered to have a prolonged impact where high alcohol content in direct contact with the oral mucosa can cause lesions or abnormalities, resulting in a shift in the medical paradigm towards eco-friendly widely considered as a solution. Propolis with antibacterial ability was formulated using the nanoemulsion steps, which were initiated by separating pure propolis through drying, and then there were variations in the formulation of 3 types of bee propolis: Heterotrigona itama, Tetragonula sapiens, and Tetragonula clypearis along with the addition of Tween 80, propylene glycol, glycerin and then the effect on microbial growth of S. mutans was compared with antimicrobial agents in Brazilian propolis with the identification and comparison of the antibacterial activity stability of the organoleptic formula. Where the active ingredient content of propolis is the highest in H. itama propolis with a total flavonoid content of 38.94 mgQE/L sample and T. clypearis propolis has the lowest total flavonoid content of 14.23 mgQE/L sample with its function as an anti-oral biofilm agent by inhibiting the glucosyltransferase was proven with a minimum percentage of 49% inhibition of S. mutans and degradation of 18% with the use of a combined surfactant proved to be able to increase the stability of the preparation shown at 2:1 (v/v).
Biomineralization Biotechnology Utilizing Lysinibacillus sphaericus to Improve Mechanical Properties of Mortar Ridwan Syarif; Siti Khodijah Chaerun; Ridho Kresna Wattimena
HAYATI Journal of Biosciences Vol. 31 No. 1 (2024): January 2024
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.31.1.48-58

Abstract

Biomineralization has notably enhanced the qualities of cement-based materials, particularly through bacterial-facilitated calcite precipitation via calcium lactate oxidation. However, existing research mainly targets self-healing aspects, with little focus on bio-based mortar properties. Consequently, this study provides a comprehensive examination of the enhancements in dry density, ultrasonic pulse velocity (UPV), and flexural strength, achieved through the application of a novel indigenous bacterial strain (Lysinibacillus sphaericus strain SKC/VA-1) from Indonesia, coupled with the incorporation of calcium lactate pentahydrate as an additive. A total of six mortar samples were prepared to investigate the influence of bacteria on the properties of mortar through biomineralization. The samples included plain mortar (M), mortar mixed with calcium lactate pentahydrate (ML), mortar mixed with a 10% v/v bacterial inoculum (MB1), mortar mixed with calcium lactate pentahydrate and a 10% v/v bacterial inoculum (MLB1), mortar mixed with a 20% v/v bacterial inoculum (MB2), and mortar mixed with calcium lactate pentahydrate and a 20% v/v bacterial inoculum (MLB2). The employment of a distinct bacterial strain for oxidizing calcium lactate represents an innovative aspect of the current study. The presence of organic calcium was found to have no adverse effects on the mortar matrix. Optimal inoculum concentrations of bacteria (10% v/v), in conjunction with calcium lactate pentahydrate, yielded superior mechanical properties. Mineralogical characterization via X-ray diffraction and microstructural analysis through scanning electron microscopy substantiated the incidence of calcite precipitation, which facilitated pore infilling and consequently augmented both the ultrasonic pulse velocity and the flexural strength of the mortar.
Xylem Vessels Traits of Oil Palm Roots Influenced by Root Diameter and Soil Hydrological Regime Amanatun Nisa; Triadiati Triadiati; Sulistijorini Sulistijorini; Martyna M Kotowska
HAYATI Journal of Biosciences Vol. 31 No. 1 (2024): January 2024
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.31.1.171-181

Abstract

Oil palm has been widely studied regarding growth and development, water use, productivity, and other economically relevant functions. However, not much is known about the hydraulic conductivity of oil palm root systems and how xylem vessels perform their function to transport water from roots to shoots so far. This information is needed to describe oil palm strategies to maintain water status, especially in oil palms that grow under various soil hydrological regimes. To investigate the root hydraulic performance, we measured mean xylem vessel diameter (D), vessel density (VD), vessel lumen area (Alumen), and potential hydraulic conductivity (Kp) for oil palm root samples in seasonally flooded riparian and well-drained sites at Harapan Jambi Forest. The result showed that D, Alumen, and Kp increased with increasing root diameter at both plantation types. On the contrary, VD significantly decreased with increasing root diameter. Potential hydraulic conductivity (Kp) in riparian sites was smaller than in well-drained sites and significantly different in root diameter >2-5 and >5-10 mm and related to both plantation types. The low potential hydraulic conductivity of root xylem vessels and the narrowing of xylem vessel lumen that occurs in oil palm roots in the seasonally flooded riparian sites were presumed as adaptation mechanisms to maintain water supply from the roots to the shoot in oil palm plants in these sites.
Study of Antihypertensive Activity from Red Quinoa Seed Protein Hydrolysate Digested by Various Protease Enzymes Suleman, Dininurilmi Putri; Harijono; Hsu, Jue-Liang
HAYATI Journal of Biosciences Vol. 31 No. 1 (2024): January 2024
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.31.1.192-199

Abstract

Proteolytic enzymes are widely used to produce protein hydrolysates that contain bioactive peptides. Some of bioactive peptides are known inhibit the angiotensin-I-converting enzyme (ACE, EC 3.4.15.1) and act as human antihypertensive. Therefore, this study aims to produce protein hydrolysates via 16 hours of digestion process using Chenopodium formosanum (red quinoa) seed and the proteases, namely pepsin, trypsin, α-chymotrypsin, and thermolysin. The hydrolysates profiles and ACE-I inhibitory activity were analyzed using reversed phase-high performance liquid chromatography (RP-HPLC). The SDS-PAGE was also used to analyze the main storage protein in red quinoa seed, identified as being 11S seed storage globulin. Meanwhile, the ACE inhibitor activities of red quinoa seed protein (RQSP) produced by various proteases include the hydrolysate of pepsin 17.03% ± 3.88%, trypsin 42.67% ± 3.19%, α-chymotrypsin 72.71% ± 2.85% and thermolysin 77.67% ± 0.98%. These results show that red quinoa seed protein is a potential source of significant ACE inhibitor activity when hydrolyzed with α-chymotrypsin and thermolysin.

Page 76 of 110 | Total Record : 1091

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