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Published by Pusat Penelitian Kelapa Sawit

ISSN : 01259318 EISSN : 18583768 DOI : -

Core Subject : Agriculture,

Agriculture, Biological Sciences & Forestry

Menara Perkebunan as a communication medium for research in estate crops published articles covering original research result on the pre- and post-harvest biotechnology of estate crops. The contents of the articles should be directed for solving the problems of production and/or processing of estate crops of smallholder, private plantations and state-owned estates, based on the three dedications of plantation. Analyses of innovative research methods and techniques in biotechnology, which are important for advancing agricultural research. Critical scientific reviews of research result in agricultural and estate biotechnology.

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Biosorpsi logam Zn oleh biomassa Saccharomyces cerevisiae *) Biosorption of Zn metal by Saccharomyces cerevisiae biomass Irma KRESNAWATY; . TRI-PANJI
E-Journal Menara Perkebunan Vol 75, No 2: Desember 2007
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

SummaryHeavy metal in waste water potentiallycauses environmental pollution. Generally,heavy metal pollutions come from metalplating, textile, latex-rubber goods, and otherindustries. The process of latex-rubber goodindustries uses heavy metal in the form ofZnO as accelerator for rubber vulcanizationprocess, so that Zn 2+ ion exists in wastewatereffluents in concentration as much as 300 ppm,whereas the maximum limit allowed is 2.5 ppm.The chemical way generally used to decreaseZn 2+ concentration in wastewater effluents isby adding bases, NaOH or Ca(OH) 2 until pHreached 11, hence this metal is precipitated asits hydroxide. However, the way is done, isvery high cost and has a risk of the emergencesecondary pollution caused by excess base. Analternative way to absorb Zn 2+ consideredinexpensive is by using biosorbent in the formof Saccharomyces cerevisiae biomass frombioethanol industrial waste. The research wasconducted using artificial wastewater withZn 2+ ion concentration of 300 ppm and the pHwas adjusted to the range between 3-7.Biosorption was conducted by addition of freeS. cerevisiae biomass as well as byimmobilized cells on filter paper. Observationwas carried out for Zn 2+ concentration aftercontact time of two and five hours. The resultsof the research indicated that free andimmobilized S. cerevisiae biomass couldabsorb Zn 2+ metal and decreased itsconcentration from 250-300 ppm to 20-50 ppm.The optimum contact time was reached at onehour, while optimum sorption process occurredat pH 5. At low concentration, less than20 ppm S. cerevisiae biomass absorbed lessZn 2+ The NaOH-treated biomass showed bettersorption capabilities compared to cells treatedby formaldehyde or heat treatments. Thecontinue experiment showed the high capacityof biomass treated with NaOH to absorb Zn 2+ ,until concentration 24,02- 47,95 ppm in thefirst sampling and 1,15-10,99 ppm in thesecond sampling. Combination adsorptionprocess using charcoal and zeolite couldadsorp remain concentration of Zn 2+ , so thatcould reached the limit concentration-allowed.RingkasanLogam berat di dalam air limbahmerupakan penyebab pencemaran lingkunganyang potensial. Pencemaran logam berat padaumumnya berasal dari industri penyepuhanlogam, tekstil, barang jadi lateks, serta industrilain. Pada proses industri barang jadi lateksdigunakan logam berat dalam bentuk ZnOsebagai akselerator proses vulkanisasi karet,sehingga ion Zn 2+ terbawa dalam air limbahindustri barang jadi dengan konsentrasimencapai 300 ppm, sedangkan ambang bataskonsentrasi yang diperbolehkan maksimaladalah 2,5 ppm. Cara kimia yang umum di-gunakan untuk menurunkan kandunganZn 2+ dalam air limbah adalah dengan caramenambahkan basa, umumnya NaOH atauCa(OH) 2 , sampai pH sekitar 11, sehinggalogam berat ini diendapkan sebagai hidroksida-nya. Namun demikian, cara ini sangat mahaldan beresiko munculnya pencemaran sekunderakibat kelebihan basa. Salah satu alternatifyang murah untuk penyerapan Zn 2+ adalahmenggunakan biosorben berupa biomassaSaccharomyces cerevisiae yang berasal darilimbah pabrik bioetanol.Penelitian dilakukan dengan mengguna-kan air limbah artifisial yang mengandung ionZn 2+ dengan konsentrasi 300 ppm. Limbahartifisial diatur pHnya antara 3-7. Biosorpsidilakukan dengan menambahkan biomassaS. cerevisiae bebas maupun yang diamobilisasidengan kertas saring. Pengamatan dilakukanterhadap kandungan Zn 2+ setelah waktu kontakdua dan lima jam. Hasil penelitian menunjuk-kan bahwa biomassa S. cerevisiae bebasmaupun amobil mampu menyerap logam Zn 2+dan menurunkan konsentrasinya dari 250-300 ppm menjadi 20-50 ppm. Waktu kontakoptimum dicapai setelah satu jam, sedangkanproses sorpsi optimum terjadi pada pH 5.Biomassa S. cerevisiae kurang efektifmenyerap logam Zn 2+ pada konsentrasi rendah,di bawah 20 ppm. Perlakuan biomassa meng-gunakan NaOH menunjukkan kemampuanpenyerapan yang lebih baik jika dibandingkandengan yang diperlakukan menggunakanformaldehida dan pemanasan. Percobaan padaaliran kontinyu yang menggunakan biomassayang diperlaukan menggunakan NaOH,menunjukkan bahwa limbah artifisial Zn 2+dapat diturunkan sampai konsentrasi 24,02-47,95 ppm pada sampling pertama, dan 1,15-10,99 ppm pada sampling kedua. Kombinasipenyerapan menggunakan arang aktif danzeolit dapat menyerap sisa Zn 2+ mencapai batasyang diperbolehkan.

Produksi Spirulina platensis dalam fotobioreaktor kontinyu menggunakan media limbah cair pabrik kelapa sawit Production of Spirulina platensis in continous photobioreactor using palm oil mill effluent media . SUHARYANTO; . TRI-PANJI; Shinta PERMATASARI; Khaswar SYAMSU
E-Journal Menara Perkebunan Vol 82, No 1: Juni 2014
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

AbstractCultivation of Spirulina platensis in an abundant available and inexpensive medium such as palm oil mill effluent (POME) will produce biomass and valuable active materials at competitive price. Utilization of POME will also reduce pollution level and support cleaned production. The objectives of this research were to determine the dilution rate of S. platensis and the reduction rate of pollution level of POME on continuous photobioreactor. Preliminary research was conducted by growing S. platensis on POME medium with various concentration, namely 25%, 50%, 75%, and 90% POME on batch system. The experiment was conducted in 1.2 L capacity continous photobioreactor using medium containing a mixture of POME and synthetic medium. Feeding rate was set up at 0.05 mL/5 sec. (dilution rate of 0.03 hr -1), 0,05 mL/10 sec. (dilution rate of 0.015 hr -1), and 0.05 mL/15 sec. (dilution rate of 0.01 hr -1). For optimum dilution rate, the experiment was scaled up eight times using 10 L capacity continous photobioreactor. The results showed that optimum growth rate of S. platensis (µmax) = 0.233, was achieved using medium consisting of 90% POME and 10% synthetic medium after two weeks. Dilution rate of 0.015 hr -1 on photobioreactor was the optimum dilution rate for growth of S. platensis as well as for decreasing polution level of POME. The result of the eight-times scale up photobioreactor using flow rate of 0.4 mL/10 sec and dilution rate of 0.015 hr -1 showed that the growth of S. platensis was relatively constant as reflected by the OD value of the suspension culture and the concentration of cellular biomass. At the optimum condition, production of S. platensis biomass was 0.267g/L and pollution level was decrease 24%. The rate of outflow also resulted the constant decrease of polution level based on total carbon (TC), total dissolve solid (TDS), dissolve oxygen (DO), BOD, and COD parameters indicating that continuous photobioreactor was running at steady state.Abstrak Kultivasi S. platensis dalam media yang tersedia me-limpah dan murah seperti limbah cair pabrik kelapa sawit (LC-PKS) akan menghasilkan biomassa dan bahan aktif bernilai ekonomi tinggi dengan harga kompetitif. Pemanfaatan LC-PKS juga akan mengurangi dampak pen-cemaran lingkungan dan membantu menciptakan sistem produksi bersih. Penelitian ini bertujuan menetapkan laju dilusi optimum per-tumbuhan S. platensis dan laju penurunan tingkat cemaran LC-PKS pada fotobioreaktor sistem kontinyu. Untuk mengukur laju alir sistem kontinyu, pertama S. platensis ditumbuhkan pada media LC-PKS 25%, 50%, 75%, dan 90% dengan sistem batch. Pertum-buhan S. platensis pada fotobioreaktor sistem kontinyu kapasitas 1,2 L dirancang dengan variasi laju alir umpan berupa LC-PKS yang dicampur media sintetik pada konsentrasi optimum. Variasi laju alir pengumpanan diatur pada variasi 0.05 mL/5 detik (laju dilusi 0,03 jam-1), 0,05 mL /10 detik (laju dilusi 0,015 jam -1), dan 0,05 mL/15 detik (laju dilusi 0,01 jam-1). Pada laju alir optimum, skala percobaan diperbesar delapan kali menggunakan foto-bioreaktor berkapasitas 10 L. Hasil penelitian menunjukkan bahwa laju pertumbuhan maksimum (µ maks) adalah 0,233 jam-1 yang diperoleh dengan campuran media LC-PKS 90% dan media sintetik 10% selama dua minggu. Fotobioreaktor dengan laju dilusi 0,015 jam-1 merupakan laju alir umpan yang optimum untuk pertumbuhan S. platensis serta menghasilkan penurunan tingkat cemaran LC-PKS yang optimum. Hasil penelitian dengan perbesaran skala delapan kali menggunakan laju alir pengumpan 0,4 mL/10 detik (laju dilusi 0,015 jam-1) menunjukkan bahwa pertumbuhan S. platensis relatif konstan. Produksi biomassa sel rata-rata sebesar 0,267g/L dan kadar cemaran limbah rata-rata menurun sebesar 24%. Laju alir keluar (outflow) juga menghasilkan kadar cemaran limbah yang konstan ber-dasarkan parameter total karbon (TC), total dissolve solid (TDS), dissolve oxygen (DO), BOD, dan COD yang menunjukkan bahwa sistem fotobioreaktor kontinyu ini berjalan dengan baik.

Penapisan dan potensi bakteri endofit asal tanaman Arecaceae sebagai agens pengendali hayati cendawan Pestalotiopsis sp. penyebab penyakit bercak daun pada kelapa kopyor (Cocos nucifera) [Selection and potency of endophytic bacteria from Arecaceae as biocontrol agents of Pestalotiopsis sp. causing leaf spot diseae on kopyor coconut (Cocos nucifera)] Deden ERIS; Abdul MUNIF; Bonny PW SOEKARNO; Agus PURWANTARA
E-Journal Menara Perkebunan Vol 85, No 1 (2017): April, 2017
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

Kopyor is a recessive-gene-trait coconut that has a delicious taste and high prices. One of several major problems of kopyor coconut cultivation is leaf spot disease. Endophytic bacteria originated from Arecaceae can be used as a biocontrol agents to control the disease in a sustainable way. The objective of the research was to select endophytic bacteria isolated from Arecaceae roots and leaves such as Pejibaye (Bactris gasipaes), Oil Palm (Elaeis guinensis), Kopyor Coconut (Cocos nucifera), Sugar Palm (Arenga pinnata) and Nibung (Oncosperma filamentosa) as biocontrol agent of Pestalotiopsis sp. Fourty isolates of endophyte bacteria are not pathogen to plant or animal and human. There are seven best selected endophytic isolates that can inhibit Pestalotiopsis sp. Some of them have the ability to dissolve phosphate, produce IAA, chitinase, and fix nitrogen. Those isolates are EAKSS 502, EAKSS 507, EAKSS 509, EAKSS 510, EAAPN 237, EAONN 545 and EAKPN 201. EAKPN 201 is the best candidate as biocontrol agent againts Pestalotiopsis sp. with 64,4% inhibition of Pestalotiopsis sp. on antagonist test. [Keywords: Palmae, plant pathogen, antagonist agents, antibiotict test]AbstrakKopyor adalah kelapa dengan sifat gen resesif yang memiliki rasa lezat dan harga yang tinggi. Salah satu masalah utama dalam pembudidayaan kelapa kopyor adalah penyakit bercak daun. Bakteri endofitik yang berasal dari tanaman Arecaceae dapat digunakan sebagai agens pengendali hayati dalam mengendalikan penyakit secara berkelanjutan. Penelitian ini bertujuan untuk menseleksi bakteri endofit yang berasal dari akar dan daun tanaman Arecaceae seperti Pejibaye (Bactris gasipaes), Kelapa Sawit (Elaeis guinensis), Kopyor Coconut (Cocos nucifera), Aren (Arenga pinnata) dan Nibung (Oncosperma filamentosa) yang berfungsi sebagai agen biokontrol Pestalotiopsis sp. Empat puluh isolat bakteri endofit non patogen terhadap tumbuhan atau hewan dan manusia berhasil diperoleh. Tujuh isolat bakteri endofit memiliki daya penghambatan terbaik terhadap cendawan Pestalotiopsis sp. Beberapa isolat memiliki kemampuan dalam melarutkan fosfat, memproduksi IAA, kitinase dan mengikat nitrogen. Ketujuh isolat tersebut yaitu isolat EAKSS 502, EAKSS 507, EAKSS 509, EAKSS 510, EAAPN 237, EAONN 545 dan EAKPN 201 EAKPN 201 adalah kandidat terbaik sebagai agen biokontrol untuk Pestalotiopsis sp. dengan penghambatan sebesar 64,4% pada uji antagonis.[Kata kunci: Palem-paleman, patogen tanaman, antagonis, uji antibiosis]

Konstruksi pustaka cDNA dari daun klon karet AVROS 2037 yang diinfeksi patogen Corynespora cassiicola Construction of a cDNA library from leaf of AVROS 2037 rubber clone infected by Corynespora cassiicola pathogen . NURHAIMI-HARIS; Hajrial ASWIDINNOOR; Antonius SUWANTO; Maggy T. SUHARTONO; Nurita TORUAN-MATHIUS; Agus PURWANTARA
E-Journal Menara Perkebunan Vol 73, No 2: Desember 2005
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

SummaryConstruction of cDNA library derived fromtranscripts made under certain condition is animportant first step to understand diseaseresistant mechanisms. To identify rubber genesor transcripts involved in defense responsetoward Corynespora cassiicola, cDNA librarywas constructed using rubber clone AVROS2037, one of resistant clone to this pathogen.cDNA library was constructed based on thestrategy of leaves infection using conidia, withthe assumption that transcript expression relatedto defense response would be induced bypathogen infection. RNA was isolated from leavesthree days after inoculation with conidia ofC. cassiicola. Steps involved in the cDNA libraryconstruction were RNA isolation, mRNApurification, cDNA synthesis, vector modifcation,cDNA insert ligation, plasmid transformation andclone verifications. Each gram of leaf producedapproximately 300  g RNA, and 0.25% of themwas mRNA. The mRNA was used to synthesizedcDNA. Ligation of cDNA and modified vectorwas facilitated by restriction enzyme SfiI. Theconstructs were transformed into the E. coliDH5 competent cells. A total of 8000 colonieswere produced. Random examination of 270colonies showed that approximately 93% of thesecolonies carried plasmid vector with DNA insertsize of 200 – 2000 bp, with average size of 500 –800 bp. cDNA library construction of rubberleaves from AVROS 2037 clone as well as somenecessary modification steps are presented in thispaper.RingkasanKonstruksi pustaka cDNA yang me-ngandung transkrip yang diekspresikan dalamkondisi tertentu merupakan tahap awal yangsangat penting dalam berbagai studi biologi.Untuk mengidentifikasi gen karet atau transkripyang berperan dalam respons pertahanan tanamankaret terhadap Corynespora cassiicola, pustakacDNA dibuat dengan menggunakan daun klonAVROS 2037 yang merupakan salah satu klonresisten terhadap patogen tersebut. PustakacDNA dibuat berdasarkan strategi menginfeksidaun dengan konidia C. cassiicola denganpertimbangan bahwa ekspresi transkrip yangberperan dalam respons pertahanan akandiinduksi oleh adanya infeksi patogen. Dengandemikian pustaka cDNA yang dibuat diharapkanmengandung gen atau bagian gen yang ber-hubungan dengan respons pertahanan. RNAdiisolasi dari daun setelah daun diinokulasiselama tiga hari dengan konidia C. cassiicola.Beberapa tahapan telah dilakukan, dimulaidengan isolasi RNA, pemurnian mRNA, sintesiscDNA, modifikasi vektor kloning, ligasi fragmencDNA utas ganda dengan vektor kloning sertatransformasi hasil ligasi ke bakteri Escherichiacoli DH5 kompeten. Dari setiap gram jaringandaun berhasil diisolasi RNA sekitar 300 g, dandari jumlah tersebut sekitar 0,25% mRNA dapatdiisolasi. mRNA yang diisolasi digunakan untuksintesis cDNA. cDNA dipotong dengan enzimrestriksi SfiI dan diligasi ke vektor plasmid yangdimodifikasi dengan menyisipkan situs enzimSfiI. cDNA-vektor rekombinan ditransformasi kedalam sel bakteri E. coli DH5 kompeten meng-gunakan metode standar. Transformasi konstrukini menghasilkan 8.000 koloni. Pengujian PCRterhadap 270 koloni yang dipilih secara acakmengindikasikan bahwa sekitar 93% kolonitersebut membawa cDNA sisipan dengan ukuranfragmen cDNA yang menyisip berkisar antara200 sampai 2000 bp. cDNA sisipan terbanyakterdapat pada ukuran antara 500 – 800 bp. Dalamtulisan ini dibahas tahap demi tahap proses yangdilakukan untuk membuat pustaka cDNA asaldaun karet klon AVROS 2037 serta beberapamodifikasi yang diperlukan.

Penggunaan biostimulan Orgamin untuk efisiensi pemupukan dan peningkatan produktivitas kelapa sawit di dataran tinggi Application of Orgamin biostimulan to enhance fertilizer efficiency and productivity of oil palm grown in highland Happy WIDIASTUTI; Djoko SANTOSO; Soekarno Mismana PUTRA; Memed WIRAMIHARDJA; Aida FARIDA; B. MARAHIMIN MARAHIMIN; K. PANJAITAN PANJAITAN; Jisman SINAGA
E-Journal Menara Perkebunan Vol 81, No 2: Desember 2013
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

AbstractThe extension of oil palm area has been expanded tomarginal land such as the highland regions. However, theproductivity of the oil palm became the main demand for theplanters. Increasing of oil palm productivity can be done byapplication of growth regulators. Growth regulators aresmall molecules in a relatively very small amount that affectthe growth and development of plant. This study wasconducted to asses the efectiveness of plant growth regu-lators (Orgamin and Orgamin plus) in improving fertilizerefficiency and productivity of mature oil palm (TM 7). Theexperiments were conducted at Marjandi oil palm plantationat an altitude of 700 m above sea level in a total area of 16 ha. Six treatments tested were 1). 100% inorganicfertilizer (control), 2). 50% inorganic fertilizer + Orgamin(50K+O), 3). 75% inorganic fertilizer + Orgamin (75K+O),4). 50% inorganic fertilizer + Orgamin plus (50K+OP), 5).75% inorganic fertilizer + Orgamin plus (75K+OP), and 6).100% inorganic fertilizer + Orgamin plus (100K+OP)arranged in a randomized block design (RBD) with threereplications. Orgamin (O) and Orgamin plus (OP) wereapplied in the hole around the oil palm along with inorganicfertilizers. The results showed that application of O and OPimproved the efficiency of inorganic fertilizers by 50% basedon vegetative variables and increased the concentration ofN, P, and K of leaf and soil compared to those of 100%inorganic fertilizer. In addition to the height and leaf numberof plant parameters, the leaf of the plant treated with O andOP showed more greenish compared to those of control.There is an indication that the O application increased thepercentage of female flowers. In addition the application ofOrgamin also produced the highest oil content in oil palmfruit particularly in the treatment of 75% of inorganicfertilizer + orgamin harvested in October compared to thosein March. Moreover, application of OP increased both thetotal weight and weight per bunch of FFB.AbstrakPengembangan kelapa sawit mengharuskan pengguna-an lahan suboptimal seperti daerah dataran tinggi. Produk-tivitas kelapa sawit menjadi tuntutan utama bagi pekebun.Peningkatan produktivitas kelapa sawit di dataran tinggididuga dapat dilakukan dengan aplikasi zat pengatur tumbuh.Zat pengatur tumbuh merupakan molekul “kecil” (small molecules) yang dalam jumlah relatif sangat sedikit mem-pengaruhi pertumbuhan/perkembangan tanaman. Penelitiandilakukan untuk menguji formula zat pengatur tumbuh(Orgamin dan Orgamin plus) dalam meningkatkan efisiensipemupukan dan produktivitas kelapa sawit TM 7. Percobaandilakukan di kebun Marjandi dengan ketinggian 700 dpl padaareal seluas 16 ha. Enam perlakuan yang diuji adalah 1).pupuk anorganik 100% (100K), 2). pupuk anorganik 50% +Orgamin (50K+O), 3). pupuk anorganik 75% + Orgamin(75K+O), 4). pupuk anorganik 50% + Orgamin plus (50K+OP), 5). pupuk anorganik 75% + Orgamin plus (75K+OP),dan 6). pupuk anorganik 100% + Orgamin plus (100K+OP)yang disusun dalam rancangan acak kelompok (RAK)dengan tiga ulangan. Orgamin (O) dan Orgamin plus (OP)diberikan dalam lubang di piringan pokok bersamaan denganpupuk anorganik. Hasil pengamatan menunjukkan bahwapemberian O dan OP dapat meningkatkan efisiensi pemupuk-an anorganik hingga 50% dilihat dari beberapa peubahvegetatif dan menghasilkan kadar N, P, dan K daun dantanah lebih tinggi dibandingkan dengan pemberian pupukanorganik 100%. Selain pada parameter tinggi tanaman danjumlah daun, peningkatan juga terlihat pada tingkatkehijauan daun. Terdapat indikasi bahwa pemberian Orgaminmeningkatkan persentase jumlah bunga betina. PemberianOrgamin juga menghasilkan kadar minyak tertinggi khusus-nya pada pemberian Orgamin + pupuk anorganik 75% padabuah yang dipanen bulan Oktober dibandingkan dengan buahyang dipanen bulan Maret. Baik data bobot per tandanmaupun bobot TBS menunjukkan bahwa pemberian OPdapat meningkatkan kedua peubah tersebut.

Ekspresi β -1,3 glukanase dan kitinase pada tanaman kopi arabika (Coffea arabica L.) tahan dan rentan karat daun Expression of β-1,3 glucanase and chitinase of arabica coffee (Coffea arabica L.) resistant and susceptible against leaf rust disease Asmini BUDIANI; I SUSANTI; Surip MAWARDI; D A SANTOSO; . SISWANTO
E-Journal Menara Perkebunan Vol 72, No 2: Desember 2004
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

Summary Leaf rust disease caused by Hemileia vastatrix is considered to be one of the most important diseases on arabica coffee plantation. In order to understand the mechanism underlying resistance of arabica coffee against leaf rust disease, this research was aimed to study expression of β-1,3 glucanase (GLU) and chitinase (CHI) genes in the arabica coffee S1934 and BLP10 that have been reported respectively as a resistant and susceptible varieties to H. vastatrix. The two varieties were essayed against H. vastatrix, and an RT-PCR (Reverse Transcriptase Polymerase Chain Reaction) using total RNAs from the S1934 and BLP10, both inoculated with H. vastatrix and uninnoculated was carried out for studying the expression of GLU and CHI. Two primer pairs were designed to amplify the conserved region of GLU and CHI. Amplification products were sequenced and the nucleotide sequences were subjected to BlastX analysis. The result of bioassay confirmed that arabica coffee S1934 was resistant to H. vastatrix, while BLP10 was susceptible. β-1,3 glucanase was expressed in all of the four samples, the inoculated and uninnoculated S1934, and BLP10 in different degree. S1934 expressed higher GLU compared to BLP10. In the inoculated S1934 the expression of this gene was higher compared to that of the uninoculated one. Expression of CHI was detected only in the S1934, both inoculated and uninoculated. Sequence analysis confirmed that the RT-PCR products were exon regions of genes encoding β-1,3 glucanase dan chitinase respectively. Both of the cDNA fragment have been cloned in E.coli. Ringkasan Karat daun yang disebabkan oleh jamur Hemileia vastatrix merupakan salah satu penyakit penting pada perkebunan kopi arabika. Untuk memahami mekanisme ketahanan kopi arabika terhadap karat daun, penelitian ini bertujuan untuk mempelajari ekspresi gen β-1,3 glukanase dan kitinase pada varietas kopi arabika S1934 yang dilaporkan tahan karat daun dan varietas BLP10 yang termasuk rentan karat daun. Untuk itu kedua varietas diuji kembali ketahanannya terhadap H. vastatrix melalui bioesai dan dilakukan RT-PCR menggunakan RNA total dari S1934 dan BLP10, baik yang diinokulasi dengan H. vastatrix maupun yang tidak diinokulasi, untuk mempelajari ekspresi gen GLU dan CHI. Dua pasang primer spesifik dirancang untuk mengamplifikasi daerah konservatif kedua gen tersebut. Hasil amplifikasi disekuen dan dianalisis menggunakan program BlastX. Hasil bioesai mengkonfirmasi bahwa S1934 tahan terhadap H. vastatrix, sedangkan BLP10 rentan. β-1,3 glukanase diekspresikan pada kedua varietas, baik yang diinokulasi maupun yang tidak diinokulasi, namun dengan tingkat ekspresi yang sedikit berbeda. Varietas S1934 mengekspresikan β-1,3 glukanase lebih tinggi dibandingkan dengan BLP10. Ekspresi gen tersebut pada S1934 yang diinokulasi lebih tinggi dibandingkan dengan yang tidak diinokulasi. Sedangkan kitinase hanya diekspresikan pada varietas S1934. Hasil sekuensing dan analisis DNA mengkonfirmasi bahwa sekuen hasil RT-PCR merupakan bagian ekson dari gen penyandi β-1,3 glukanase dan kitinase. Kedua fragmen tersebut telah diklon pada E. coli.

Potensi Pseudomonas fluorescens strain KTSS untuk bioremediasi merkuri di dalam tanah The Potential use of Pseudomonas fluorescens KTSS strain formercury bioremediation in the soil Laksmita Prima SANTI; Didiek Hadjar GOENADI
E-Journal Menara Perkebunan Vol 77, No 2: Desember 2009
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

AbstractHeavy metals are widespread pollutants insoil and become environmental concern as theyare non-degradable and highly persistent. Solidand/or liquid wastes containing toxic heavymetals may be generated in various industrial ormining processes. A heavy metal resistantbacterium may be present in the soil and miningsite. As they already preconditioned by abundantheavy metals contaminant, the use of thesebacterium is assumed to be effective in improvingmetals reduction. To obtain bacterial isolateshighly capable of mercury (Hg) reduction,isolation activities have been conducted atselected sites of mining locations in SouthSumatera. The highly potential bacteriapossessing mercury reducing capability has beenisolated from this site i.e. Pseudomonasfluorescens KTSS strain. Inoculating of 25%(v/w) suspension of P. fluorescens KTSS strain insoil material added 5000 ppb of mercury, couldreduced about 53.3% of mercury soil contents.Best vegetative growth performance of cocoaseedlings was shown by the application of 15-15-15 NPK conventional fertilizers in combinationwith the addition of 1.6 – 3.25 g of P. fluorescensKTSS bio-ameliorant/seed. A Greenhouseexperiment results of cocoa seedlings were inconcordance with those obtained from field trialsof paddy.AbstrakLogam berat merupakan jenis polutan yangterdistribusi secara luas di dalam tanah danmendapat perhatian secara khusus karena sifatnyayang tidak dapat terdegradasi serta dapat bertahanlama di dalam lingkungan. Limbah padatdan/atau cair yang dihasilkan dari berbagai prosesindustri dan pertambangan mengandung logamberat toksik. Jenis bakteri yang resisten terhadaplogam berat mungkin berada di dalam tanah dandi lokasi tambang. Apabila bakteri tersebut dapatberadaptasi pada lingkungan dengan tingkatkontaminasi logam berat yang tinggi, makadiasumsikan bahwa penggunaan bakteri tersebutsangat efektif dalam meningkatkan reduksi logamberat. Untuk memperoleh isolat bakteri yangmemiliki kemampuan mereduksi merkuri (Hg),maka satu rangkaian kegiatan isolasi telahdilakukan di lokasi tambang terpilih di SumateraSelatan. Bakteri potensial pereduksi merkuri yangtelah diisolasi dari lokasi ini diidentifikasisebagai Pseudomonas fluorescens strain KTSS.Inokulasi sebanyak 25% (v/b) suspensi P. fluore-scens strain KTSS ke dalam bahan tanah yangtelah ditambah dengan 5000 ppb merkuri, dapatmereduksi sekitar 53,3% kandungan merkuri didalam tanah. Pertumbuhan terbaik dari bibitkakao diperoleh dari perlakuan pupuk NPK 15-15-15 yang dikombinasikan dengan 1,6 – 3,25 gbioamelioran P. Fluorescens strain KTSS/bibit.Pengujian bioamelioran P. fluorescens strainKTSS di lapang pada tanaman padi memberikanpola keefektifan yang sama dengan hasilpengujian terhadap bibit kakao yang dilakukan dirumah kaca.

Kriteria planlet kelapa kopyor yang siap untuk diaklimatisasi [Criteria of kopyor coconut plantlets ready to be acclimatized] . SUMARYONO; Imron RIYADI
E-Journal Menara Perkebunan Vol 84, No 1: Oktober 2016
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

Kopyor coconut is a special coconut grown in Indonesia. Nuts of kopyor can not be used as a source of planting material due to its endosperm damage; therefore in vitro embryo rescue technique is applied to propagate kopyor coconuts. Acclimatization is a critical stage during in vitro culture of kopyor coconut. Experiments were conducted to determine the effect of plantlet initial conditions prior to acclimatization on survival and growth in ex vitro conditions. Five replications of 50 plantlets of tall variety of kopyor coconut with different shoot and root conditions were used in the acclimatization process. The coconut plantlets were planted on plastic pots containing a mixture of soil, sand and dung manure, and then placed inside a closed plastic tunnel. The tunnel was opened gradually after 3 months and the plants were transferred to the nursery after 4.5 months. Survival frequency and growth (plant height, leaf number and shoot diameter) of the plantlets were observed after 6 months of acclimatization period. Research results show that the initial plantlet height and initial root length affected significantly the survival rate and growth of the plantlets of kopyor coconut during acclimatization. Other parameters of plantlet initial conditions such as leaf number, stem diameter, primary root number, and the existence of secondary roots did not influence the survival rate and growth of the plantlets. In order to obtain high survival rate (84.7%) and good growth of plantlets during acclimatization, the plantlet height must be at least 20 cm prior to acclimatization. Differences in root length on plantlets with the height of 20 cm or more, did not affect survival percentage of the vitroplants.

Agensia hayati dan Arachis pintoi memacu pertumbuhan tanaman lada (Piper nigrum) dan mengurangi kejadian penyakit kuning Biocontrol agents and Arachis pintoi promote the growth of black pepper (Piper nigrum) and reduce the incidence of yellow disease Muhammad TAUFIK; Andi KHAERUNI; Abdul WAHAB; . AMIRUDDIN
E-Journal Menara Perkebunan Vol 79, No 2: Desember 2011
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

AbstractYellow disease is a complex disease caused byFusarium sp., Phytophthora sp., and nematodes. Infectedplants were quickly killed and were difficult for replanting,causing significant losses for the growers. Various controlmethods were examined including the use of bioconrolagents and cover crop Arachis pintoi. The researchobjective was to determine the ability of biocontrol agentsand A. pintoi to improve pepper growth and reduce yellowdisease incidence on pepper plants in the field. Researchresults showed that the treatment of biocontrol andA. pintoi promoted vegetative growth of pepper plants, andincreased pepper height for up to more five times, andreduced yellow disease incidence to 30%AbstrakPenyakit kuning merupakan penyakit kompleks yangdisebabkan oleh Fusarium sp., Phytophthora sp. dannematoda parasit. Tanaman sakit mengalami kematianyang cepat dan kebun yang telah terinfeksi sulit untukditanami kembali, sehingga mengakibatkan kerugian yangnyata terhadap petani. Berbagai cara pengendalian telahdiuji termasuk penggunaan agens hayati Plant GrowthPromoting Rhizobacteria (PGPR), Trichoderma sp. dantanaman Arachis pintoi. Tujuan penelitian adalahmengetahui kemampuan agensia hayati dan Arachis pintoidalam meningkatkan pertumbuhan dan mengurangikejadian penyakit kuning pada tanaman lada di lapang.Hasil penelitian menunjukkan bahwa perlakuan agenshayati dan A. pintoi meningkatkan tinggi dan jumlah dauntanaman lada lebih dari lima kali serta mempercepatmunculnya sulur dibandingkan dengan kontrol danfungisida. Aplikasi Trichoderma sp. yang dikombinasidengan A. pintoi menekan kejadian penyakit kuning hampir30%.

Effect of Tithonia diversifolia extract on the biodegradability of the bioplastics in plantation soil (Pengaruh ekstrak Tithonia diversifolia terhadap biodegradabilitas bioplastik di tanah perkebunan) . ISROI; Nendyo A WIBOWO; Evi SAVITRI; Deden D ERIS; Agus PURWANTARA
E-Journal Menara Perkebunan Vol 86, No 2 (2018): Oktober 2018
Publisher : INDONESIAN RESEARCH INSTITUTE FOR BIOTECHNOLOGY AND BIOINDUSTRY

Effect of Tithonia diversifoliaextract on biodegradability of the bioplastic was evaluated using plantation soil as natural inoculum. The bioplastic was a composite of cellulose from cacao pod husk, starch and enriched by tithoniaextract. Biodegradation test wasereconducted in the glass jar for 60 days. The carbon dioxide generated from the biodegradation test titrated by 0.1 N sodium hydroxide solutions. The carbon dioxide was measured with 0.1 N HCl and using phenolphthalein followed by methyl orange as indicator. Carbon dioxide was detected in the bioplastic samples but not detected in the conventional plastic sample during the test. Biodegradation of the bioplastic enriched by tithoniaextract was higher than that of the bioplastic without tithoniaextract. Biodegra-dation rate of the bioplastic samples in plantation soil were 0.068 mg CO2/day and 0.178 mg CO2/day for the bioplastic without and with tithoniaextract, respectively. Biodegradation of the bioplastic samples for 45 days were 12.44% and 28.07% for the bioplastic without and with tithoniaextract, respectively. Complete biodegradation of the bioplastic predicted in 244 days and 200 days for the bioplastic without and with tithoniaextract, respectively. [Kata kunci :Tithonia diversifolia, biodegrada-bility, bioplastic, plantation soil]. AbstrakPengaruh ekstrak Tithonia diversifoliaterhadap biodegradabilitas bioplastik dievaluasi dengan menggunakan tanah perkebunan sebagai inokulum alami. Bioplastik yang digunakan adalah komposit selulosa dari kulit buah kakao, pati dan diperkaya dengan ekstrak tithonia. Uji biodegra-dasi dilakukan di dalam botol selama 60 hari. Karbon dioksida yang dihasilkan dari uji biodegradasi diserap oleh larutan natrium hidroksida 0,1 N. Karbon dioksida dititrasi dengan HCl 0,1 N dan menggunakan fenolftalein diikuti dengan metil jingga sebagai indikator. Karbon dioksida terdeteksi pada sampel bioplastik namun tidak terdeteksi pada sampel plastik konvensional.Bioplastik yang diperkaya dengan ekstrak tithonia menghasilkan tingkat biodegradasi yang lebih tinggi dari pada bioplastik tanpa ekstrak tithonia. Tingkat biodegradasi sampel bioplastik di tanah perkebunan adalah 0,068 mg CO2/hari dan0,188 mg CO2/hari masing-masing untuk bioplastik tanpa dan dengan ekstrak tithonia. Biodegradasi sampel bioplastik selama 45 hari adalah 12,44% dan 28,07%berturut-turutuntuk bioplastik tanpa dan dengan ekstrak tithonia. Biodegradasi keseluruhan bioplastik diperkirakan membutuh-kan waktu 244 hari dan 200 harimasing-masinguntuk bioplastik tanpa dan dengan ekstrak tithonia.[Keywords:Tithonia diversifolia, biodegradaibi-litas, bioplastik, tanah perkebunan].

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Home Page

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Contact Name Hayati Minarsih

Contact Email menaraperkebunanppbbi@gmail.org

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Journal Mail Official menaraperkebunan@iribb.org

Editorial Address Jalan Taman Kencana No.1 Bogor 16128, Jawa Barat

Location Kab. bogor, Jawa barat INDONESIA

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Contact Name
Hayati Minarsih

Contact Email
menaraperkebunanppbbi@gmail.org

Phone
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Journal Mail Official
menaraperkebunan@iribb.org

Editorial Address
Jalan Taman Kencana No.1 Bogor 16128, Jawa Barat

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Kab. bogor,

Jawa barat

INDONESIA