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INDONESIA
Jurnal Biodjati
Published by Universitas Islam Negeri Sunan Gunung Djati Bandung
ISSN : 25481606     EISSN : 25414208     DOI : 10.15575/biodjati
Core Subject : Science,
Biochemistry, Genetics & Molecular Biology Earth & Planetary Sciences
Arjuna Subject : -
Articles 482 Documents
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Effectiveness of Lactic Acid Bacteria to Improve Cyprinus carpio Fingerlings Resistance Against Rosidah Rosidah; Yuniar Mulyani; Walim Lili; Khasanatur Rosyidah
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.5260

Abstract

Common carp (Cyprinus carpio) cultivation is often hampered by a disease attack, one of them is the attack of Edwarsiella tarda. Lactic acid bacteria (LAB) can be used as an alternative to prevent diseases in fish by increasing the body's resistance. This research aimed to determine the most effective isolates of LAB that increase of the resistance of carp fingerlings to the attack of E. tarda bacteria and see which isolates can produce the highest survival. The LAB isolates used were the result of isolation from the gut of carp. This study used a Completely Randomized Design (CRD) consisting of four treatments with three replications. The fish were immersed with different LAB isolates, CcB7, CcB8, and CcB15 in the same density of 108 cells / mm3. Immersion was carried out for 30 minutes with a frequency of seven days. While during the research, two immersions were carried out before the challenge test against E. tarda bacteria. The parameters observed were the number of leukocytes, hematocrit, erythrocyte, differential leukocytes, survival rate, and clinical symptoms that appeared. The results showed that all LAB isolates used in this study could increase the body resistance of carp against the attacks of E. tarda bacteria. The LAB CcB7 isolate was the most effective for enhancing the body resistance of carp fish withthe highest increase level of  leukocyte, erythrocyte, and hematocrit were 18 ± 0.057,7 ± 0,077, and 0.26± 7.31% respectively. After being challenged with E. tarda bacteria producing mild clinical symptoms, the highest increase is in monocyte and neutrophil cells was 20 and 62% respectively, the highest reduction in lymphocytes was – 9%  and the highest survival rate was 80%. 
Comparative Study on Phytoplankton Community in Two Newly Dug Ponds in Institut Teknologi Sumatera Hendry Wijayanti; Andy Darmawan
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.7996

Abstract

Phytoplankton community plays an important ecological role in the aquatic ecosystems as the primary producers and forms the fundament of the aquatic food chain for supporting the water community. Thus, the phytoplankton community structure is a good indicator of water quality due to its sensitiveness to environmental stresses. Two newly dug ponds in Institut Teknologi Sumatera may give an opportunity to study the early colonizing stages of various freshwater communities including phytoplankton. The study attempted to determine the composition and abundance of phytoplankton. Samples were collected from two ponds (A and C) in the reservoir water of Institut Teknologi Sumatera. The content of Phosphorus (P), Nitrogen (N), and Chlorophyll-a (algae biomass) were determined. Phytoplankton had higher diversity in Pond C than Pond A in the study period, in which a total of seven taxa were found, namely Bacillariophycea, Cyanophyceae, Chlorophyceae, Conjugatophyceae, Dinophyceae, Euglenophyceae, Gymnodiniaceae. The most species abundance of both ponds was Peridinium sp. and Trachelomonas sp. The Pond C had the highest mean value of the Shannon-Wiener diversity index. The Linear mixed-effect model showed that low turbidity will result in high phytoplankton diversity. The finding of this study suggests that higher phytoplankton diversity would achieve a natural carrying capacity, and thus would serves as an indicator of ecosystem health.
Species Density and Lead (Pb) Pollution in Mangrove Ecosystem, South Kalimantan Anang Kadarsah; Dafiuddin Salim; Sadang Husain; Marta Dinata
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.7411

Abstract

Its crucial to get information about lead (Pb) heavy metal pollution from mining and oil palm plantation on species density in mangrove ecosystem, to anticipate its impacts. This study aimed is to compare the types and densities of vegetation in mangrove ecosystems allegedly due to mining in Setarap village, Tanah Bumbu Regency and oil palm plantations in Kuala Tambangan Village, Tanah Laut Regency. We also analysis the condition of waters (TDS, pH and DO) and organic content in sediments to acquire data from the South Kalimantan mangrove ecosystems. The results showed there were four species of true mangroves (Avicennia alba, Acanthus ebracteatus, Nypa fruticans and Rhizophora apiculate) could live well in the environment affected by mining or oil palm plantations. The species density for trees was low (933 ind/ha) for mangroves affected by coal mines, while those affected by oil palm plantations had higher densities (1,067 ind/ha). pH value of waters in affected area by coal mining showed more acidic value (pH 5.76) especially at the back, while those by palm oil plantations are more acidic (pH 6) in the estuary. Organic matter content in sediments affected by coal mines was in the range of 0.61-6.59%, while those affected by oil palm plantations showed higher values (0.12-2.19%). Lead heavy metal content (Pb) in waters affected by coal mines was 0.031-0.056 mg/L, while the area affected by oil palm plantations was of higher value (0.110-0.128 mg/L). Lead (Pb) levels in sediments indicate higher values than waters, which reach 3.512-6.046 mg/Kg (affected by coal mines), and in areas affected by oil palm plantations reaching 6.658-6.66 mg/Kg. The general conclusion is that vegetation densities in areas affected by coal mines are lower than oil palm plantations. The level of lead  (Pb) pollution in the sediments is higher than in the waters.
Amphibians Diversity in Sulap Hill and Watervang Dam, Lubuklinggau Zico Fakhrur Rozi; Dian Samitra
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.5340

Abstract

Sulap Hill and Watervang Dam are located in the central of the city of Lubuklinggau, South Sumatra Province, which has a variety of organisms, including amphibians. This study aimed to determine the diversity of amphibian species in the area of  Sulap Hill and Watervang Dam Lubuklinggau City. This research was conducted from June to August 2018. Data collection was an exploration method-combined visual encounter survey (VES). The samples obtained were identified at the Biology Education Laboratory, STKIP PGRI Lubuklinggau. Data analysis included species composition, diversity index, and Evenness index, and conservation status. The results of the study found 5 families, consist of 11 species: Duttaphyrnus melanotictus, Ingerophrynus divergens, Phrynoidis asper, Fejervarya cancrivora, Fejervarya limnocharis, Limnonectes kuhlii, Limnonectes macrodon, Limnonectes paramacrodon, Polypedates leucomystax, Hylarana erythraea, Ichthyophis sumatranus. The results of the data analysis showed that the amphibian diversity index in the Sulap hill (1.55) and Watervang dam (1.84) was categorized as low. The Evenness index in Sulap Hill (0.86) and Watervang Dam (0.88) was categorized as a high uniformity and stable community. Based on data from the International Union for Conservation of Nature and Natural Resources (IUCN) Red List, 8 species have the status of Least Concern, 1 species with Vulnerable status, 1 species with Near-threatened status and 1 species with data deficient status.
Polymorphic Identification of Simple Sequence Repeat (SSR) Marker for Developing Aluminum-Tolerance Upland Rice Yuliana Galih Dyan Anggraheni; Enung Sri Mulyaningsih; Dody Priadi; Puspita Deswina; Yuli Sulistyowati; Eko Binnaryo Mei Adi; Ambar Yuswi Perdani; Fiqolbi Nuro; Yashanti Berlinda Paradisa
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.7990

Abstract

SSR marker is one of the genetic markers widely applied in plant breeding programs. The application of molecular markers in plant breeding is meant to accelerate the selection of cross-progeny. The research aimed to identify the SSR primers polymorphism between the parent and control that linked to Al tolerance and verify the cross-progeny of five crosses. The result gained from 37 SSR primers used in this study showed that only nine primers are polymorphic. These nine polymorphic primers are RM257, RM214, RM247, RM205, RM490, RM262, RM569, RM271, and RM19. The application of polymorphic markers on five cross-progeny which have shown the same band pattern as the parents and tolerant control on the use of 9 SSR primers recorded as follows: RM257 2 lines, RM214 5 lines, RM247 5 lines, RM205 lines, RM490 13 lines, RM262 5 lines, RM569 7 lines, RM271 4 lines, and RM19 6 lines. The selected SSR primers linked to Al tolerance in this research can be used as a reference for molecular breeding strategies to develop new Al tolerance rice varieties in dryland conditions.
Protease, Lipase and Amylase Activities in Barred Loach, Nemacheilus Fasciatus C.V. Untung Susilo; Farida Nur Rachmawati
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.6530

Abstract

Barred loach is wild fish in which there is no information related to its enzymatic digestive capacity yet. Therefore research on this subject needs to be conducted.  The spectrophotometry method was used to study protease, lipase, and amylase activities in barred loach. The study used 89 fish with an average weight of 3.61 ± 0.26g, and 1.68 ± 0.21g.  The results showed that pH 7.0 was the highest protease activity. Similarly, lipase activity found  between pH 7.0 and pH 8.1. Still, the amylase activity found to be high at pH 8.1. Protease activity also found to be high in the posterior intestine than in the hepato-pancreas and anterior intestine. Lipase and amylase activities did not found differences between hepato-pancreas, anterior intestine, and posterior intestine. In conclusion, the protease, lipase, and amylase activities of barred loach found along the gastrointestinal tract in both large and small fish, which shows that barred loach can digest protein, fat, and carbohydrates in diets better.
Distribution of Periphyton in the Upstream Section of Citarum River, West Java, Indonesia Isma Noviana; Tri Dewi Kusuma Ningrum Pribadi; Keukeu Kaniawati Rosada
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.7717

Abstract

Periphyton indeed plays an undeniably vital role as primary producers in the food web within aquatic ecosystems such as rivers. The existence of periphyton will affect the populations of the aquatic organisms at higher trophic level, thus it is interesting to be explored, especially in big rivers like Citarum. This study aimed to explore the distribution of periphyton, including its types and abundance at several stations in the upstream part of Citarum River based on the land use in the riverbanks, in the dry season of 2018. Samples were taken at nine stations, namely Gunung Wayang Springs, Outlet Cisanti at the valley of Mount Wayang, and the connecting tributaries as follows: Cihejo, Cibuni, Cirasea, Cikaro, Cisangkuy, Cikapundung, and Ciwidey. Samples of periphyton were taken from the substrate of stone, wood, plastic, and macrophytes at three sampling points of each station. Periphyton samples were then scraped off from the surface of the substrate, where the deposit would then be filtered using plankton net No.20, preserved with Lugol 1% and subsequently identified. The results showed there were 83 species from 58 genera of both phytoperiphyton and zooperiphyton, classified as periphyton found on the sites. The total abundance of phytoperiphyton ranged between 2.3 x 104 ind/m2 and 1.3 x 108 ind/m2 where the total abundance of zooperiphyton covered from 4.7 x 102 ind/m2 to 3.7 x 105 ind/m2. The highest and the lowest numbers of total abundance of periphyton were shown at stations of Gunung Wayang Spring and Cirasea tributary, respectively. 
Effectiveness of Modified Traps for Protection Against Fruit Flies on Mango Agus Susanto; Sudarjat Sudarjat; Endah Yulia; Agus Dana Permana; Aries Gunawan; Dwi Harya Yudistira
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.7926

Abstract

Mango is one of the primary fruit export commodities in Indonesia. The productivity of mango can be increased by controlling the pest population, including fruit flies Bactrocera spp. Various efforts to control the population of fruit flies have been carried out, either by implementing traditional methods or by using synthetic pesticides. However, synthetic pesticides can cause pollution, and therefore we need to control the fruit flies’ population by using the most effective fruit fly trap mode. The study was conducted in the mango yield (monoculture) of Department of Agriculture in Majalengka. The traps in this study were modified Steiner traps with funnels, modified Steiner traps without funnels, bottle traps with funnels, bottle traps without funnels, and modified gypsy moth traps. Each trap was fed with 0.2 ml of Methyl eugenol dripped on a cotton roll and hung in the trap. The results showed that the number of fruit flies caught in each trap every week is significantly different. The highest number of fruit flies caught in each trap every week was achieved by bottle traps without funnels that caught 135 flies, while the lowest number of fruit flies caught was recorded by the gypsy moth traps with 16 flies. The transparent color of the bottles and a large number of holes effectively lured the fruit flies into the bottle traps without funnels.
Bamboos Diversity in Banggai Kepulauan, Central Sulawesi, Indonesia I Putu Gede P. Damayanto; Kusuma Rahmawati
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.6230

Abstract

A bamboo inventory for Banggai Kepulauan has never been done. Knowledge of the islands’ floristic diversity is poor. This study explored bamboo diversity in Banggai Kepulauan, Central Sulawesi, Indonesia. We conducted fieldwork from June – July 2019 on the islands of Peleng and Bakalan. Bamboo specimens were collected and deposited in Herbarium Bogoriense. We describe these specimens here. We found eight species: Bambusa tuldoides Munro, B. vulgaris Schrad. ex Wendl., Dendrocalamus asper (Schult.f.) Backer ex Heyne, Gigantochloa atter (Hassk.) Kurz, Neololeba atra (Lindl.) Widjaja, Schizostachyum brachycladum (Kurz ex Munro) Kurz, S. lima (Blanco) Merr., and Thyrsostachys siamensis Gamble. Here we record information on morphology, habitat and distribution alongside photographs and an identification key to the bamboo species of Banggai Kepulauan.
Studies on Fern of Lesser Sunda Islands I: Checklist of the Genus Adiantum (Pteridaceae) Wenni Setyo Lestari; Bayu Adjie
Jurnal Biodjati Vol 5, No 1 (2020): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v5i1.6365

Abstract

Adiantum or maidenhair fern is one of the largest genera in Pteridaceae. We survey their species diversity in Lesser Sunda Islands, Indonesia through the living collection and herbarium examination. Seventeen species of Adiantum were recorded. including five species that considered as introduced and naturalized species. One species that grows naturally, Adiantum silvaticum, were previously known as endemic to Australia. However, this study revealed the new distribution of this species on Sumba and Flores.

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