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INDONESIA
Biology, Medicine, & Natural Product Chemistry
Published by Universitas Islam Negeri Sunan Kalijaga Yogyakarta
ISSN : -     EISSN : -     DOI : -
Core Subject : Health, Science,
Biochemistry, Genetics & Molecular Biology Medicine & Pharmacology Public Health
BIOLOGY, MEDICINE, & NATURAL PRODUCT CHEMISTRY, this journal is published to attract and disseminate innovative and expert findings in the fields of plant, animal, and microorganism secondary metabolite, and also the effect of natural product on biological system as a reference source for researchers in these fields, and with the aim to set international standards in their methodology.
Arjuna Subject : -
Articles 666 Documents
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Antibacterial Actinomycetes from Tropical Ecosystem Karst in South Sulawesi: Isolation, Characterization, and Bioactive Metabolite Profiling Alimuddin Ali; Pasmawati Pasmawati; Rukman Muslimin; Alnadia Yusriya Hibatullah; Deni Frans Sakka; Christina Aryanti Pada Soa; Kusdianawati Buhaerah; Muharram Passitta
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.253-262

Abstract

The emergence of antimicrobial-resistant pathogens reinforces the critical need for new antibiotics sourced from unexplored microbial habitats. Actinomycetes remain the most prolific bacterial producers of bioactive secondary metabolites, yet tropical karst ecosystems and plant-associated rhizospheres in Indonesia remain poorly investigated despite their ecological complexity. This study aimed to isolate, screen, and characterize Actinomycetes from the karst and rhizospheric environments of South Sulawesi, Indonesia, and to identify isolates capable of producing antibacterial compounds. A total of 42 isolates were obtained using heat-shock pretreatment and selective Starch Casein Agar. Preliminary antagonistic assays against Staphylococcus aureus ATCC 25923 and Escherichia coli ATCC 35218 identified four active isolates. Two isolates KMR 1E2 and SDR 2a exhibited strong inhibition (>30 mm) against S. aureus, while SDR 9.9 inhibited E. coli. Morphological and phenotypic characterization revealed diverse spore-chain architectures, colony color profiles, carbon and nitrogen utilization patterns, salinity tolerance, melanin production, and variable growth under different pH and temperature conditions. Ethyl acetate extracts of KMR 1E2 and SDR 2a demonstrated potent antibacterial activity, and TLC-bioautography identified three active metabolites (Rf 0.73, 0.48, 0.34), with the Rf 0.34 spot associated with an alkaloid-type compound. The minimum inhibitory concentration (MIC) of KMR 1E2 extract against S. aureus was 0.3125 mg/mL. This study confirms that tropical karst ecosystems in Indonesia are promising reservoirs of antibiotic-producing Actinomycetes and provides a foundation for future genomic and chemical elucidation studies
The Effect of Cucumber (Cucumis Sativus) Feeding on the Estrus Cycle in Female Mice (Mus musculus) Fassa Atif Aprilia; Harlita Harlita
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.331-336

Abstract

Cucumbers (Cucumis sativus) are plants that contain bioactive compounds such as flavonoids and phytoestrogens that resemble the hormone estrogen, so they have the potential to affect the reproductive system. One of the indicators of the balance of reproductive hormones in female animals is the etrus cycle. An imbalance of the hormones estrogen and progesterone can cause changes in the duration of the etruscan cycle. This study aims to determine the effect of cucumber extract administration on the estrus cycle of female rats (Mus musculus). This study is an experimental study with Complete Random Design (CRD). A total of 9 female rats were divided into three groups, namely the control group, the treatment group with a dose of 200 mg/kg body weight, and the treatment group with a dose of 300 mg/kg body weight. Cucumber extract is administered orally for 15 days. Observation of the estrus cycle is carried out daily by the vaginal swab method. The data were analyzed using a one-way analysis of variance test. The results showed that the average duration of the estrus cycle of the control group was 4.8 days, the 200 mg/kg BB dose treatment group was 6.1 days, and the 300 mg/kg BB dose treatment group was 4.6 days. The results of statistical analysis showed that the administration of cucumber extract did not have a significant effect on the estrus cycle of female mice (p > 0.05). It can be concluded that administration of cucumber extract at doses of 200 mg/kg BB and 300 mg/kg BB did not have a significant effect on the estrus cycle of female rats, although there is a tendency to alter the length of the estrus phase in some individuals.
Antifungal Activity of the Ethyl Acetate Fraction of Matoa Leaves (Pometia pinnata J. R. Forst & G. Forst) Against Trichophyton rubrum Tika Afriani; Devahimer Harsep Rosi; Reka Cania
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.299-303

Abstract

Dermatophytosis is a prevalent skin infection in tropical regions like Indonesia, predominantly caused by the fungus Trichophyton rubrum. While Matoa leaves (Pometia pinnata) are known for their medicinal properties, their specific antifungal potency requires optimization through fractionation. This study aimed to evaluate the antifungal activity of the ethyl acetate fraction of Matoa leaves and determine its effective concentration against T. rubrum. This experimental study employed the disc diffusion method using Sabouraud Dextrose Agar (SDA). The ethyl acetate fraction was tested at concentrations of 10% and 20%, with 2% Ketoconazole as the positive control and DMSO as the negative control. The results demonstrated that the ethyl acetate fraction exhibited strong antifungal activity, yielding inhibition zones of 18.25 mm at 10% concentration and 19.75 mm at 20% concentration. Statistical analysis using the Kruskal-Wallis and Mann-Whitney tests indicated significant antifungal activity compared to the negative control (p < 0.05), though no significant difference was observed between the 10% and 20% concentrations. These findings suggest that the semi-polar ethyl acetate fraction of Matoa leaves is a potent natural antifungal agent, showing strong efficacy even at lower concentrations.
Haematological Modulation Associated with Sub-Chronic Oral Administration of Extracts of Simarouba glauca (Paradise tree) in Male Wister Rats: A Comparative Study Ishaq Sammydavies E. Osagie-Eweka; Khadijah A. Isimekhai
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.263-269

Abstract

Simarouba glauca has been reported to possess various bioactive compounds with therapeutic potentials; with paucity of data on safety; hence, the study aimed to evaluate the effects of aqueous, ethanol and methanol leaf extracts of Simarouba glauca on hematological indices of male Wistar rats. The study was conducted according to the guidelines of organization for economic co-operation and development (OECD), No. 425; with a total of thirty male Wistar rats; divided into ten groups of n >= 3. Experimental rats were administered Simarouba glauca Leaf extracts at 500, 1000 and 2000 mgkg-1 body weight, respectively; while the control group received feed and water only ad libitum daily for 30 days. Selected hematological indices were evaluated. Groups administered respective doses of ethanol and methanol leaf extracts demonstrated significant (p < 0.05) dose-dependent elevation of red blood cell; significant (p< 0.05) rise in the white blood cell count of groups administered aqueous, ethanol and methanol extracts respectively at high doses; whereas, at 500 mgkg-1 of respective extracts, there were no differences (p > 0.05) in white blood cell count. Monocytes increased (p < 0.05) in groups administered respective doses of the extracts; while lymphocytes increased in groups administered respective doses of ethanol extract. Although, the extracts elicited alterations in white blood cells at higher doses; extract(s) did not induce anemia. Interestingly, extracts stimulated marked increases in red blood cell counts; an indication of the seemingly erythropoietic potentials of the extracts.
Phytochemical Profile, Antioxidant Activity, and Brine Shrimp Lethality Test of Thyrsostachys siamensis (Siamese Bamboo) Leaf Extracts Muhamad Aditya Hidayah; Indah Ayudia; Gerda Pintoko Tunjungsari; Retno Aliyatul Fikroh; Alfandi Ahmad
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.379-389

Abstract

Cancer and oxidative-stress–related disorders continue to rise globally, driving interest in plant-based antioxidants with concurrent cytotoxic potential. This study aimed to characterize the phytochemical profile, antioxidant activity, and brine shrimp (Artemia salina) lethality of Thyrsostachys siamensis (Siamese bamboo) leaf extracts obtained with solvents of increasing polarity (n-hexane, chloroform, acetone, ethyl acetate, methanol, ethanol, and water). Ethanol appears as the most effective solvent for T. siamensis, combining a solid extraction yield (7.78%) with the richest phytochemical profile (positive for alkaloids, flavonoids, saponins, tannins, and phenolics). This broad chemical recovery corresponds to the strongest bioactivity, shown by its lowest IC50 (91.48 ± 0.12 µg/mL) and LC50 (80.78 ± 0.62 µg/mL). Acetone (6.42%) and ethyl acetate (5.11%) offer moderate yields and selective enrichment of semi-polar constituents, reflected in intermediate IC50 values (144–150 µg/mL) and LC50 values (273–350 µg/mL). In contrast, hexane despite providing the highest mass recovery (11.34%) contains mainly non-phenolic components and shows weak biological activity (IC50 200.52 ± 0.38 µg/mL, LC50 620.06 ± 0.76 µg/mL). Chloroform, with limited phytochemical content, yields the poorest performance (IC50 238.30 ± 1.56 µg/mL, LC50 926.40 ± 4.27 µg/mL).
In Silico Study of Ethanolic and Methanolic Extracts of Tridax procumbens (Londotan) as Anti-Inflammatory Agents Targeting the COX-2 Receptor Ishrolana Lutfi Anggraeni; Hosnatul Hasanah; Nur Faizah; Indah Ayu Wulandari; Silvia Kurnia Sari; Mohammad Rofik Usman
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.337-348

Abstract

Inflammation is a major pathological process that occurs when the body’s immune system responds to stimuli caused by various injury factors. The incidence of injuries in Indonesia has reached 9.7%, showing an increase compared to 2014 (7.3%) and 2007 (7.9%). One plant that has not been widely utilized as a medicinal agent but is known to possess anti-inflammatory activity is T. procumbens (commonly known as londotan). The aim of this study was to evaluate the interaction mechanisms of the bioactive compounds from T. procumbens with the COX-2 receptor through a molecular docking approach using the receptor structure obtained from the Protein Data Bank (PDB ID: 5IKR). Sodium diclofenac was employed as the positive control to identify potential new anti-inflammatory drug candidates with favorable pharmacokinetic profiles The molecular docking simulation results indicated that Quercetin-3-O-alpha-L-rhamnopyranoside the lowest binding free energy (delta G = ?9.73 kcal/mol) with an inhibition constant (Ki) of 73.71 nM, and formed significant hydrophobic interactions with the native ligand residues LEU B:352, VAL B:523, VAL B:349, and ALA B:527. In terms of pharmacokinetic properties, Quercetin-3-O-alpha-L-rhamnopyranoside demonstrated superior performance compared to sodium diclofenac and the native ligand, suggesting that T. procumbens has promising potential to be developed as an anti-inflammatory drug.
Formulation and Effectiveness Test of Starfruit Extract Shampoo (Averrhoa bilimbi L.) Against Mortality Pediculus humanus capitis Intan Kurnia Putri; Maya Uzia Beandrade; Regina Ananda; Reza Anindita
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.305-312

Abstract

One of the skin infections that cause health problems in children is pediculosis capitis, which is caused by head lice (Pediculus humanus capitis). One of the efforts to prevent pediculosis can be by testing the formulation of an anti-head lice shampoo using the natural ingredient of star fruit (Averrhoa bilimbi L), which contains flavonoid compounds, alkaloids, and saponins. The purpose of this study was to determine the physical stability and effectiveness of the killing power of anti-head lice shampoo preparations with variations in the concentration of star fruit extract formula 1 (F1) 1.5%; formula 2 (F2) 2%; and formula 3 (F3) 2.5% against head lice Pediculus humanus capitis. This type of research is a mixed method (quantitative and qualitative) with an experimental design. The variation in the head lice anti-head shampoo formula is F1 1.5%, F2 2%, and F3 2.5%. Phytochemical screening tests include flavonoid compounds, alkaloids, and saponins. Physical stability tests were carried out for four weeks, including organoleptic, homogeneity, pH, viscosity, and foam height. The lethality test was carried out on the head lice of Pediculus humanus capitis. The data analysis is descriptive and comparative with the One Way ANOVA test. The phytochemical screening test of star fruit extract obtained positive results for flavonoids, alkaloids, and saponins. The organoleptic test of F1 shampoo 1.5%, F2 2%, and F3 2.5% showed white, thick results and a distinctive lemon aroma. The viscosity test was F1 1.5% (2,007-2,020 cP), F2 2% (2,020 cP), and F3 2.5% (2,020 cP). The homogeneity test obtained homogeneous results in all three formulas. The results of the foam height test were F1 1.5% (7.17-9.50 cm), F2 2% (7.67-9.83 cm), and F3 (7.83-9.80 cm). The results of the One Way Anova test showed a significance value of 0.012 < 0.05, or there was a significance influence of the shampoo formula of F1 1.5%, F2 2%, and F3 2.5% against the pH value of head lice anti-head shampoo stored for four weeks. The shampoo of star fruit extract affected the death of head lice for 10 minutes with an effective formula at a concentration of 2.5%. The physical evaluation of the head lice shampoo preparation showed good stability. The comparative test results showed that the pH of the shampoo preparation stored for four weeks could be unstable.
Kinetic Release Models of Nitrogen and Iron from Chitosan-Biochar Based Slow Release Fertilizers Martasiana Karbeka
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.271-277

Abstract

The use of slow-release fertilizers (SRFs) is increasingly recognized as a sustainable method to enhance nutrient-use efficiency. This study utilized nitrogen from urea and Fe from iron sand, both encapsulated in chitosan–biochar matrices through NaOH-induced solidification to form bead-type SRFs. Four formulations with different biochar–urea ratios were prepared: A (CB2U2Fe), B (CB3U2Fe), C (CB3U3Fe), and D (CB2U3Fe). Bead morphology was examined using scanning electron microscopy (SEM), while nitrogen and Fe release behavior was evaluated after 1, 3, 5, and 7 days under soil percolation. Release patterns were modeled using pseudo-first-order (PFO), pseudo-second-order (PSO), Weber–Morris, and Elovich kinetics. SEM results showed that chitosan–biochar–urea beads (BCB@N) contained numerous voids and surface cracks, indicating a porous microstructure. In contrast, chitosan–biochar–urea–Fe beads (BCB@UFe) displayed a denser structure with fewer pores, supporting more controlled water entry and nutrient diffusion. Release experiments identified sample C as the most stable formulation for both nitrogen and Fe. Nitrogen-release kinetics fitted the PFO (R² = 0.920) and PSO (R² = 0.954) models, indicating diffusion-driven release with weak surface interactions. Fe-release kinetics for sample C aligned best with the PFO and Weber–Morris models, suggesting dominance of intra-particle diffusion and physisorption processes.
Protective Effect of Ethanolic Mistletoe Leaves (Scurula atropurpurea (Bl.) Dans) Extract Against Protein Denaturation In Vitro Dwi Aditiyarini; Christini Bernaindah Nadapdap; Ratih Restiani
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.391-399

Abstract

Inflammation is a complex biological response that eliminates harmful stimuli, clears damaged tissues, and initiates healing. Protein denaturation is known to trigger inflammatory reactions and is associated with chronic disorders such as rheumatoid arthritis, lupus erythematosus, and serum sickness. Although steroidal and non-steroidal anti-inflammatory drugs (NSAIDs) are widely used, their long-term use may cause adverse effects. Herbal plants represent potential alternative therapies with fewer side effects. This study examined the anti-inflammatory potential of Scurrula atropurpurea, a hemiparasitic plant traditionally used for various medicinal purposes. The ethanolic leaf extract was evaluated for its phytochemical composition, antioxidant properties, and ability to inhibit egg albumin denaturation in vitro. Fresh leaves were collected from tea plants in Sapuran, Wonosobo, and extracted using Soxhlet with 96% ethanol. Phytochemical screening indicated the presence of alkaloids, flavonoids, tannins, phenolics, saponins, steroids, and terpenoids. Quantitative analysis showed a high total phenolic content (126.10 ± 1.5 mg GAE/g extract), moderate tannins, and relatively low flavonoids. The extract demonstrated weak antioxidant activity (IC50 = 140.4 ± 4.9 µg/mL) and minimal protein denaturation inhibition (maximum 1.51% at 100 ppm), significantly lower than sodium diclofenac as a positive control. Overall, the ethanolic extract of S. atropurpurea leaves exhibited low in vitro anti-inflammatory activity, suggesting the need for further investigation using alternative extraction methods, plant parts, or host species.
Uncovering the Molecular Mechanisms of Saurauia vulcani Korth in Rhodamine B Induced Colon Injury Feimmy Ruth Pratiwi Sipahutar; Erlintan Sinaga; Masdiana Sinambela; Adriana Yulinda Dumaria LumbanGaol; Melati Nugrahalia Sipahutar
Biology, Medicine, & Natural Product Chemistry Vol 15, No 1 (2026)
Publisher : Sunan Kalijaga State Islamic University & Society for Indonesian Biodiversity

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14421/biomedich.2026.151.349-355

Abstract

The illegal food colorant, Rhodamine B (RhB), might lead to chronic colon injury. Saurauia vulcani is an ethnomedicine utilized for hepatoprotection, antioxidants, and immunomodulators. The histopathological and bioinformatic assays were conducted to discover the ethanolic extract of S. vulcani (EEP) against colon damage in RhB-induced rats. The abnormal results were exhibited in RhB administration, while EEP regained colon length and improved the histopathology of the ascending colon in rats. Furthermore, the construction of PPI predicted TP53, SRC, EGFR, AKT1, MTOR, CASP3, ABCG2, CTNNB1, MAPK14, MAPK8, and JUN as the main targets related to chronic colon injury. The molecular interaction presented S. vulcani had the stable fluctuation and strong binding affinities to thymidine phosphorylase. Therefore, this finding could be preliminary data for chronic colon injury treatment.

Page 54 of 67 | Total Record : 666

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